| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1134 |
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| Symbol | |
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| ID | 5454359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1250393 |
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| End bp | 1251034 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640876704 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001412412 |
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| Protein GI | 154251588 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAAAAA TTTACACCTA CCTGATCGAC GATCATCATG TCCTGCGCCA GGCGGTTGTC
GAAATGCTGG AGGCGGAGGA AGATATTTCC GTCATCGGGC AGAGCGGCGA TGCGCGTTCC
GGCATTGGCG AAATAGCAAA CCTGAAGCCG GATGTCGCCA TCCTCGACCT CAAGATGCCG
GGCATGACGG GTCTCGCCGC GATAGGCGAA ATCCTCCGCG CCGCGCCGAA AACAGGCATC
ATCATTTTCA CCATGTATGA CAATCCTGCC TATGTCTGGG AGACCACGAA CGCGGGCGCG
AGCGGCTATG TGCTGAAAAG CGCCTCGAAG GAAGACCTGC TTCGTGCCGT CCGCGCCGTA
CATGCGGGCG GGGGTTATTT GCAGGCCGAG GTGACGAAAC CGCTGCTCCG CCGCCTTGCG
CAGGACGCCC GCACTTCCGG CCAGAAGGCC ACGCTCACTT CGCGCGAATT GCAGGTGCTT
GAATGCCTCG CCGATGGCCA GAGCAACAAG ATGATCGCCC AGACGCTTTC CATCACCGAG
GATACGGTGA AGGCACATTT GAAAAGCCTC TATGAAAAAC TGGGCGCCTC CGATCGCGCC
CATGCGGTTG CCATTTCGCT CCGCCAGCAG CTCATCGAGT AG
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| Protein sequence | MRKIYTYLID DHHVLRQAVV EMLEAEEDIS VIGQSGDARS GIGEIANLKP DVAILDLKMP
GMTGLAAIGE ILRAAPKTGI IIFTMYDNPA YVWETTNAGA SGYVLKSASK EDLLRAVRAV
HAGGGYLQAE VTKPLLRRLA QDARTSGQKA TLTSRELQVL ECLADGQSNK MIAQTLSITE
DTVKAHLKSL YEKLGASDRA HAVAISLRQQ LIE
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