More than 300 homologs were found in PanDaTox collection
for query gene Plav_1134 on replicon NC_009719
Organism: Parvibaculum lavamentivorans DS-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  100 
 
 		 213 aa  431  1e-120  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  37.62 
 
 		 207 aa  162  4.0000000000000004e-39  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  40.64 
 
 		 222 aa  160  1e-38  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal  1 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  39.34 
 
 		 217 aa  160  1e-38  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  42.44 
 
 		 218 aa  159  3e-38  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  39.62 
 
 		 228 aa  158  7e-38  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_0621  two component LuxR family transcriptional regulator  40.28 
 
 		 212 aa  157  8e-38  Caulobacter sp. K31  Bacteria  normal  1  normal  0.881689 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  39.27 
 
 		 223 aa  157  2e-37  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  38.54 
 
 		 216 aa  155  3e-37  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  40.48 
 
 		 215 aa  154  7e-37  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  39.52 
 
 		 212 aa  153  2e-36  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  37.26 
 
 		 232 aa  153  2e-36  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  37.21 
 
 		 238 aa  152  2.9999999999999998e-36  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  37.62 
 
 		 209 aa  152  2.9999999999999998e-36  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  37.74 
 
 		 221 aa  152  5e-36  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  37.21 
 
 		 250 aa  151  5.9999999999999996e-36  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  40 
 
 		 209 aa  151  7e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  36.32 
 
 		 232 aa  150  1e-35  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  39.71 
 
 		 216 aa  150  1e-35  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  33.33 
 
 		 224 aa  148  7e-35  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  36.97 
 
 		 216 aa  148  8e-35  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  38.76 
 
 		 206 aa  147  9e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal  1 
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  35.38 
 
 		 232 aa  147  1.0000000000000001e-34  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  40 
 
 		 216 aa  147  1.0000000000000001e-34  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  40.57 
 
 		 213 aa  147  2.0000000000000003e-34  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  37.32 
 
 		 218 aa  146  2.0000000000000003e-34  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  39.71 
 
 		 213 aa  146  2.0000000000000003e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.999676 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  37.32 
 
 		 209 aa  146  3e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  38.69 
 
 		 209 aa  146  3e-34  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_4183  two component LuxR family transcriptional regulator  39.2 
 
 		 220 aa  145  5e-34  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  35.41 
 
 		 213 aa  145  6e-34  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  37.02 
 
 		 211 aa  145  6e-34  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.265588 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  36.45 
 
 		 214 aa  144  9e-34  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_009439  Pmen_2668  two component LuxR family transcriptional regulator  36.67 
 
 		 213 aa  144  1e-33  Pseudomonas mendocina ymp  Bacteria  normal  0.18046  normal  1 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  36.32 
 
 		 211 aa  144  1e-33  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_4778  two component LuxR family transcriptional regulator  35.41 
 
 		 208 aa  143  2e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000269792  n/a   
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  37.32 
 
 		 209 aa  143  2e-33  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_3748  two component LuxR family transcriptional regulator  33.96 
 
 		 211 aa  142  3e-33  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.107866  normal  1 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  38.57 
 
 		 227 aa  142  3e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  36.15 
 
 		 225 aa  142  4e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal  1 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  35.02 
 
 		 242 aa  142  5e-33  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  36.65 
 
 		 227 aa  142  5e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  37.85 
 
 		 214 aa  141  6e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  39.23 
 
 		 226 aa  141  7e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  36.36 
 
 		 209 aa  141  8e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_3811  two component transcriptional regulator, LuxR family  38.16 
 
 		 206 aa  141  8e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  hitchhiker  0.00252848 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  37.14 
 
 		 210 aa  140  9.999999999999999e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  35.05 
 
 		 215 aa  140  9.999999999999999e-33  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  40.49 
 
 		 227 aa  140  9.999999999999999e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013037  Dfer_2055  two component transcriptional regulator, LuxR family  34.4 
 
 		 220 aa  140  9.999999999999999e-33  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_1284  two component LuxR family transcriptional regulator  39.34 
 
 		 209 aa  140  9.999999999999999e-33  Opitutus terrae PB90-1  Bacteria  normal  0.479266  normal  1 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  38.21 
 
 		 211 aa  139  1.9999999999999998e-32  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  35.05 
 
 		 215 aa  139  1.9999999999999998e-32  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  35.51 
 
 		 215 aa  140  1.9999999999999998e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  32.55 
 
 		 213 aa  140  1.9999999999999998e-32  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  39.9 
 
 		 215 aa  140  1.9999999999999998e-32  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  35.65 
 
 		 253 aa  139  1.9999999999999998e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  38.14 
 
 		 220 aa  140  1.9999999999999998e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  39.9 
 
 		 215 aa  140  1.9999999999999998e-32  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  39.9 
 
 		 215 aa  140  1.9999999999999998e-32  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  36.67 
 
 		 231 aa  140  1.9999999999999998e-32  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  34.58 
 
 		 215 aa  140  1.9999999999999998e-32  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  35.05 
 
 		 215 aa  139  3e-32  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  35.05 
 
 		 215 aa  139  3e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  35.05 
 
 		 215 aa  139  3e-32  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  35.05 
 
 		 215 aa  139  3e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  35.05 
 
 		 215 aa  139  3e-32  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  35.85 
 
 		 217 aa  139  3e-32  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  34.58 
 
 		 215 aa  139  3e-32  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  33.96 
 
 		 212 aa  139  3e-32  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  38.5 
 
 		 218 aa  139  3.9999999999999997e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal  1 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  35.21 
 
 		 215 aa  139  3.9999999999999997e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  38.21 
 
 		 218 aa  139  3.9999999999999997e-32  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  35.41 
 
 		 216 aa  139  3.9999999999999997e-32  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  35.27 
 
 		 209 aa  138  4.999999999999999e-32  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal  1 
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  35.41 
 
 		 244 aa  138  4.999999999999999e-32  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.322421 
 
 
-
 
NC_013132  Cpin_4160  two component transcriptional regulator, LuxR family  31.46 
 
 		 215 aa  138  4.999999999999999e-32  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0201669  normal  0.0925574 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  35.55 
 
 		 218 aa  139  4.999999999999999e-32  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  35.55 
 
 		 218 aa  139  4.999999999999999e-32  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  38.25 
 
 		 244 aa  138  4.999999999999999e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  37.91 
 
 		 230 aa  138  6e-32  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  37.8 
 
 		 219 aa  138  6e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  35.45 
 
 		 226 aa  138  7e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  38.1 
 
 		 217 aa  137  7.999999999999999e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  38.24 
 
 		 215 aa  137  7.999999999999999e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  32.71 
 
 		 216 aa  138  7.999999999999999e-32  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  37.2 
 
 		 222 aa  137  8.999999999999999e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  37.8 
 
 		 219 aa  137  8.999999999999999e-32  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  35.91 
 
 		 226 aa  137  1e-31  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_011988  Avi_5384  two component response regulator  35.21 
 
 		 216 aa  137  1e-31  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3524  response regulator receiver protein  36.36 
 
 		 214 aa  137  1e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0390864  normal  1 
 
 
-
 
NC_009338  Mflv_5014  two component LuxR family transcriptional regulator  35.55 
 
 		 209 aa  137  1e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.103708  normal  0.29037 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  35.81 
 
 		 219 aa  137  1e-31  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_010571  Oter_2926  two component LuxR family transcriptional regulator  36.36 
 
 		 223 aa  136  2e-31  Opitutus terrae PB90-1  Bacteria  normal  0.380263  normal  1 
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  35.47 
 
 		 209 aa  137  2e-31  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  37.75 
 
 		 211 aa  136  2e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  34.2 
 
 		 226 aa  136  2e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  34.29 
 
 		 226 aa  137  2e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal  1 
 
 
-
 
NC_014165  Tbis_3505  LuxR family two component transcriptional regulator  35.86 
 
 		 213 aa  137  2e-31  Thermobispora bispora DSM 43833  Bacteria  normal  0.345096  normal  1 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  34.72 
 
 		 218 aa  136  2e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
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