| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0724 |
|---|
| Symbol | |
|---|
| ID | 8224293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 862331 |
|---|
| End bp | 862963 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644928597 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003085151 |
|---|
| Protein GI | 255034530 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.836709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCTA GGATCATCGT TTTCGACGAC AACCAGGAAA GGCTTAACAG CGTAGCCATG
CTTCTGAACC TCTCCGCCGA CTTTATTTGC GCCGGCACAT TTCCCAATGC CGGCAACCTC
GTCGCCGACA TCACCGCCTC GAAACCGGAC CTGGTGCTGA TGGACATTGA TATGCCCGGC
CTGGACGGCA TTGAAGCCAC TAGGCTCGTC CGCAAGCATT TCGATGCATT GCCGGTGCTC
ATCCAAACCA ATTTCGAAGA AGATGACCGG ATATTCGGCA GTCTGAGGGC CGGCGCGAAC
GGTTATCTGC TCAAAAAAAC GAGCCCCGAA CGATTTCTTG AAAGCCTGCG GGAGGCGCTC
GACGGCGGCG CTCCCATGAC CGGCAGCATC GCCGCGAGGG TACTGCGGCA CTTTTCGGCC
GAGAGCGAGG CGAAAAAGGA TTATCACCTT ACCGAACGCG AAAAACAGAT TCTGGGCTTT
TTGGTAAAAG GATACAGCTA CAAGCTCATT GCCGCGGAAT GCACCATTTC CTACAATACC
GTGAACAACC ACATCCGAAA TATTTACGAC AAATTGTACG TAAACAGCGC CACGGAGGCT
GTGAGCCTGG CCATTAAGGA AAGGCTGGTG TAA
|
|---|
| Protein sequence | MTSRIIVFDD NQERLNSVAM LLNLSADFIC AGTFPNAGNL VADITASKPD LVLMDIDMPG
LDGIEATRLV RKHFDALPVL IQTNFEEDDR IFGSLRAGAN GYLLKKTSPE RFLESLREAL
DGGAPMTGSI AARVLRHFSA ESEAKKDYHL TEREKQILGF LVKGYSYKLI AAECTISYNT
VNNHIRNIYD KLYVNSATEA VSLAIKERLV
|
|---|
| |