More than 300 homologs were found in PanDaTox collection
for query gene Namu_5018 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  100 
 
 
209 aa  411  1e-114  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2145  two component transcriptional regulator, LuxR family  63.13 
 
 
220 aa  228  4e-59  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0196231  n/a   
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  58.42 
 
 
207 aa  216  2e-55  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  47.57 
 
 
215 aa  188  5.999999999999999e-47  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  47.09 
 
 
215 aa  187  1e-46  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  47.09 
 
 
215 aa  187  1e-46  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  47.34 
 
 
215 aa  186  2e-46  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  47.09 
 
 
215 aa  186  3e-46  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  47.09 
 
 
215 aa  185  5e-46  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  47.09 
 
 
215 aa  185  5e-46  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  47.09 
 
 
215 aa  185  5e-46  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  47.09 
 
 
215 aa  185  5e-46  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  47.09 
 
 
215 aa  185  5e-46  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  50.52 
 
 
212 aa  180  2e-44  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  49.75 
 
 
213 aa  179  4e-44  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.624898 
 
 
-
 
NC_013757  Gobs_3116  two component transcriptional regulator, LuxR family  54.15 
 
 
215 aa  176  3e-43  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  47.34 
 
 
228 aa  172  1.9999999999999998e-42  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  46.12 
 
 
217 aa  172  1.9999999999999998e-42  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_011658  BCAH187_A2375  DNA-binding response regulator, LuxR family  45.5 
 
 
209 aa  172  2.9999999999999996e-42  Bacillus cereus AH187  Bacteria  normal  0.248491  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  39.44 
 
 
216 aa  171  6.999999999999999e-42  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  45.54 
 
 
213 aa  171  6.999999999999999e-42  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_003909  BCE_2293  LuxR family DNA-binding response regulator  45.05 
 
 
211 aa  169  2e-41  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  50.51 
 
 
211 aa  170  2e-41  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  44.55 
 
 
213 aa  169  3e-41  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  45.93 
 
 
225 aa  169  4e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  46.7 
 
 
226 aa  168  6e-41  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009806  Krad_4530  two component LuxR family transcriptional regulator  47.16 
 
 
241 aa  168  6e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  hitchhiker  0.00470183 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  44.71 
 
 
219 aa  167  7e-41  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS2109  LuxR family DNA-binding response regulator  43.5 
 
 
209 aa  167  9e-41  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_2048  response regulator  43.5 
 
 
209 aa  167  9e-41  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.102554  n/a   
 
 
-
 
NC_006274  BCZK2046  response regulator  43.5 
 
 
209 aa  167  9e-41  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_2265  LuxR family DNA-binding response regulator  43.5 
 
 
209 aa  167  9e-41  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.201191  n/a   
 
 
-
 
NC_011773  BCAH820_2290  DNA-binding response regulator, LuxR family  43.5 
 
 
209 aa  167  9e-41  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000736213 
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  45.77 
 
 
215 aa  167  1e-40  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  44.55 
 
 
213 aa  167  1e-40  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000000185138 
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  48.97 
 
 
209 aa  165  4e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1708  two component LuxR family transcriptional regulator  45.63 
 
 
221 aa  163  2.0000000000000002e-39  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.685529 
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  41.83 
 
 
219 aa  162  2.0000000000000002e-39  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.817999 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  48.76 
 
 
212 aa  162  2.0000000000000002e-39  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  42.29 
 
 
232 aa  162  3e-39  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  46.91 
 
 
207 aa  162  3e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  41.79 
 
 
232 aa  162  4.0000000000000004e-39  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  44.93 
 
 
218 aa  162  5.0000000000000005e-39  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  45.27 
 
 
213 aa  161  6e-39  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  43.06 
 
 
214 aa  160  9e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.785726 
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  41.83 
 
 
219 aa  160  9e-39  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  43.63 
 
 
214 aa  160  1e-38  Deinococcus geothermalis DSM 11300  Bacteria  normal  hitchhiker  0.0084678 
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  41.29 
 
 
232 aa  159  2e-38  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  45.24 
 
 
223 aa  158  6e-38  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  44.39 
 
 
219 aa  157  8e-38  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_009972  Haur_4485  two component LuxR family transcriptional regulator  45 
 
 
213 aa  157  8e-38  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.310872  n/a   
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  45.88 
 
 
209 aa  157  1e-37  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  36.23 
 
 
216 aa  157  1e-37  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  45.75 
 
 
212 aa  156  2e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  45.27 
 
 
235 aa  157  2e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  45.77 
 
 
206 aa  156  2e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal 
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  45.23 
 
 
217 aa  156  2e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2717  two component transcriptional regulator, LuxR family  43.54 
 
 
223 aa  155  3e-37  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  44.83 
 
 
232 aa  155  3e-37  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  41.58 
 
 
224 aa  155  3e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  36.45 
 
 
208 aa  155  4e-37  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  40.1 
 
 
221 aa  155  4e-37  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  45.27 
 
 
218 aa  155  4e-37  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009487  SaurJH9_1938  two component LuxR family transcriptional regulator  40.2 
 
 
209 aa  155  4e-37  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0454  two component LuxR family transcriptional regulator  41.58 
 
 
208 aa  155  4e-37  Roseiflexus sp. RS-1  Bacteria  normal  0.698939  hitchhiker  0.00367889 
 
 
-
 
NC_009632  SaurJH1_1972  response regulator receiver  40.2 
 
 
209 aa  155  4e-37  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2340  two component transcriptional regulator, LuxR family  48.58 
 
 
217 aa  155  5.0000000000000005e-37  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.273151  normal 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  40.2 
 
 
222 aa  155  6e-37  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  39.32 
 
 
216 aa  154  7e-37  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_33010  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  44.93 
 
 
223 aa  154  8e-37  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.163463  normal 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  49.23 
 
 
212 aa  154  8e-37  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  45.59 
 
 
206 aa  154  9e-37  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  43.54 
 
 
222 aa  154  1e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  46.8 
 
 
210 aa  153  1e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  42.23 
 
 
221 aa  154  1e-36  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  43.96 
 
 
225 aa  154  1e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  42.92 
 
 
226 aa  153  2e-36  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  39.39 
 
 
207 aa  153  2e-36  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  39.39 
 
 
207 aa  153  2e-36  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  43.48 
 
 
227 aa  153  2e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  43.2 
 
 
213 aa  152  2.9999999999999998e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.999676 
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  43.75 
 
 
209 aa  152  2.9999999999999998e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.2 
 
 
222 aa  152  2.9999999999999998e-36  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  41.79 
 
 
209 aa  152  2.9999999999999998e-36  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.87 
 
 
226 aa  152  2.9999999999999998e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  44.66 
 
 
209 aa  152  4e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  47.34 
 
 
221 aa  152  4e-36  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  43.93 
 
 
223 aa  152  5e-36  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  40.29 
 
 
214 aa  151  5.9999999999999996e-36  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  39.32 
 
 
217 aa  150  8.999999999999999e-36  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0065  two component transcriptional regulator, LuxR family  43.15 
 
 
204 aa  150  1e-35  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  44.98 
 
 
217 aa  150  1e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  45.69 
 
 
209 aa  150  1e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_014210  Ndas_4366  two component transcriptional regulator, LuxR family  42.47 
 
 
225 aa  150  1e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1284  two component LuxR family transcriptional regulator  46.7 
 
 
209 aa  150  1e-35  Opitutus terrae PB90-1  Bacteria  normal  0.479266  normal 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  46.63 
 
 
217 aa  150  2e-35  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0322  DNA-binding response regulator  40.91 
 
 
213 aa  149  2e-35  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  41.59 
 
 
219 aa  150  2e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  43.87 
 
 
215 aa  150  2e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  40.69 
 
 
211 aa  149  2e-35  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
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