| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4160 |
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| Symbol | |
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| ID | 8360333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5190961 |
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| End bp | 5191608 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966330 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003123819 |
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| Protein GI | 256423166 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0201669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0925574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTATAC GCGTTGCCAT TTTTGACGAC AACAAAAACA TTCGCAATAG CATCAGGCTG
TTACTGGATA CGGCTCCTTC CATCGAGGTG GTAGGCGTGT TCAGCGACGC CCGGAATTGT
GTGAACGATG TGCTGAACTG TAGTGCCGAC ATAGTACTGA TGGACATTGA AATGCCGGAA
ATCAGCGGTA TTGAAGCGAT CAAACAGCTT AAAAAAGAAG TGCCGCATGT ACAGATCCTC
ATTCAAACGG TGTTTGAGGA CGATGACAGG GTCTTTGACT CTATCTGTGC AGGGGCTTCA
GGGTATATTC TGAAGAATCA CCTGAACACA AGGCTGATTG ACGCCATACA GGAGCTGCAA
ACGGGTGGCT CTCCCATGAG TCCATCCATC GCCCGCCGCG TACTGAATCT TTTACAGAAA
AGTGCCGTAC AGAAGCCGGA GCCGAACAAT GACAGCTATA ATCTGACGGC CAGAGAGAAA
GAAGTGCTGA CCTGTATTGT GAACGGACAA AGTTACAAGA TGATCGCCAG CGACCTGAAT
ATCAGTTACG AAACGGTGCG CAGCCATGTG AAGAAGATCT ATGAAAAGTT GCACGTAGCT
TCTCTGACAG AGGCGGTTGC GCTGGCCATA AATCAACGTA TCGTATAG
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| Protein sequence | MSIRVAIFDD NKNIRNSIRL LLDTAPSIEV VGVFSDARNC VNDVLNCSAD IVLMDIEMPE
ISGIEAIKQL KKEVPHVQIL IQTVFEDDDR VFDSICAGAS GYILKNHLNT RLIDAIQELQ
TGGSPMSPSI ARRVLNLLQK SAVQKPEPNN DSYNLTAREK EVLTCIVNGQ SYKMIASDLN
ISYETVRSHV KKIYEKLHVA SLTEAVALAI NQRIV
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