More than 300 homologs were found in PanDaTox collection
for query gene Dfer_0724 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013037  Dfer_0724  two component transcriptional regulator, LuxR family  100 
 
 		 210 aa  431  1e-120  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.836709 
 
 
-
 
NC_013132  Cpin_4160  two component transcriptional regulator, LuxR family  44.19 
 
 		 215 aa  189  2.9999999999999997e-47  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0201669  normal  0.0925574 
 
 
-
 
NC_013132  Cpin_3102  two component transcriptional regulator, LuxR family  39.5 
 
 		 222 aa  152  2.9999999999999998e-36  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.774177  normal  0.15342 
 
 
-
 
NC_013216  Dtox_3754  two component transcriptional regulator, LuxR family  36.1 
 
 		 216 aa  140  1.9999999999999998e-32  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00290124  normal  1 
 
 
-
 
NC_014148  Plim_0373  response regulator receiver  36.97 
 
 		 220 aa  134  7.000000000000001e-31  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  38.71 
 
 		 222 aa  133  1.9999999999999998e-30  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal  1 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  38.25 
 
 		 223 aa  132  5e-30  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
NC_009441  Fjoh_4735  two component LuxR family transcriptional regulator  34.95 
 
 		 209 aa  131  6e-30  Flavobacterium johnsoniae UW101  Bacteria  normal  0.545478  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  33.65 
 
 		 217 aa  131  7.999999999999999e-30  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  36.71 
 
 		 207 aa  130  1.0000000000000001e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  33.17 
 
 		 216 aa  128  7.000000000000001e-29  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_1616  response regulator receiver  32.69 
 
 		 210 aa  127  1.0000000000000001e-28  Pedobacter heparinus DSM 2366  Bacteria  normal  0.869432  normal  1 
 
 
-
 
NC_009972  Haur_1104  two component LuxR family transcriptional regulator  35.98 
 
 		 218 aa  126  3e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.348687  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  32.09 
 
 		 215 aa  125  4.0000000000000003e-28  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  32.08 
 
 		 238 aa  125  6e-28  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  35.23 
 
 		 218 aa  124  1e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  31.63 
 
 		 215 aa  123  2e-27  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  31.63 
 
 		 215 aa  123  2e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  31.63 
 
 		 215 aa  123  2e-27  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  31.63 
 
 		 215 aa  123  2e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  31.63 
 
 		 215 aa  123  2e-27  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  31.63 
 
 		 215 aa  122  3e-27  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  31.63 
 
 		 250 aa  122  4e-27  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  31.73 
 
 		 231 aa  122  5e-27  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  38.32 
 
 		 218 aa  121  6e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  34.11 
 
 		 234 aa  121  6e-27  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  36.32 
 
 		 221 aa  121  7e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  33.65 
 
 		 220 aa  121  9e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  31.63 
 
 		 215 aa  121  9.999999999999999e-27  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  31.63 
 
 		 215 aa  120  9.999999999999999e-27  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  31.16 
 
 		 215 aa  120  9.999999999999999e-27  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  32.86 
 
 		 237 aa  120  9.999999999999999e-27  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  34.74 
 
 		 213 aa  120  9.999999999999999e-27  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  37.38 
 
 		 209 aa  120  9.999999999999999e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  35.91 
 
 		 226 aa  120  9.999999999999999e-27  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_006274  BCZK3023  response regulator  32.41 
 
 		 597 aa  119  1.9999999999999998e-26  Bacillus cereus E33L  Bacteria  decreased coverage  0.000011368  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  32.85 
 
 		 217 aa  119  3e-26  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  31.88 
 
 		 213 aa  119  3e-26  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  0.000000185138 
 
 
-
 
NC_011773  BCAH820_2290  DNA-binding response regulator, LuxR family  32.54 
 
 		 209 aa  119  3.9999999999999996e-26  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000736213 
 
 
-
 
NC_005945  BAS2109  LuxR family DNA-binding response regulator  32.54 
 
 		 209 aa  119  3.9999999999999996e-26  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_2048  response regulator  32.54 
 
 		 209 aa  119  3.9999999999999996e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.102554  n/a   
 
 
-
 
NC_006274  BCZK2046  response regulator  32.54 
 
 		 209 aa  119  3.9999999999999996e-26  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_2265  LuxR family DNA-binding response regulator  32.54 
 
 		 209 aa  119  3.9999999999999996e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.201191  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  32.24 
 
 		 234 aa  119  3.9999999999999996e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  32.56 
 
 		 236 aa  119  3.9999999999999996e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  35.59 
 
 		 227 aa  119  3.9999999999999996e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  31.4 
 
 		 213 aa  118  6e-26  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  33.33 
 
 		 225 aa  118  6e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  32.37 
 
 		 209 aa  118  6e-26  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  36.59 
 
 		 220 aa  118  7e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  33.49 
 
 		 228 aa  117  7.999999999999999e-26  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_011658  BCAH187_A2375  DNA-binding response regulator, LuxR family  33.01 
 
 		 209 aa  117  9.999999999999999e-26  Bacillus cereus AH187  Bacteria  normal  0.248491  n/a   
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  32.39 
 
 		 237 aa  117  9.999999999999999e-26  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  32.37 
 
 		 232 aa  117  9.999999999999999e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  30.43 
 
 		 213 aa  117  9.999999999999999e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  31.4 
 
 		 216 aa  117  9.999999999999999e-26  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  34.11 
 
 		 225 aa  117  9.999999999999999e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  33.18 
 
 		 253 aa  116  1.9999999999999998e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  33.98 
 
 		 209 aa  116  1.9999999999999998e-25  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  34.91 
 
 		 218 aa  116  1.9999999999999998e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  33 
 
 		 211 aa  117  1.9999999999999998e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.64 
 
 		 222 aa  116  1.9999999999999998e-25  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal  1 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  32.23 
 
 		 230 aa  116  3e-25  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_0919  two component LuxR family transcriptional regulator  30.66 
 
 		 214 aa  116  3e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.86 
 
 		 225 aa  115  5e-25  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  33.99 
 
 		 209 aa  115  5e-25  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  33.33 
 
 		 226 aa  115  6.9999999999999995e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  33.98 
 
 		 221 aa  114  7.999999999999999e-25  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  35.07 
 
 		 219 aa  114  7.999999999999999e-25  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_2464  two component LuxR family transcriptional regulator  33.01 
 
 		 221 aa  114  8.999999999999998e-25  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003909  BCE_2293  LuxR family DNA-binding response regulator  29.95 
 
 		 211 aa  114  1.0000000000000001e-24  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_2717  two component transcriptional regulator, LuxR family  33.49 
 
 		 223 aa  114  1.0000000000000001e-24  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  29.95 
 
 		 224 aa  114  1.0000000000000001e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  32.7 
 
 		 218 aa  114  1.0000000000000001e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  33.95 
 
 		 229 aa  114  1.0000000000000001e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  35.98 
 
 		 219 aa  114  1.0000000000000001e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  31.94 
 
 		 225 aa  114  1.0000000000000001e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal  1 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  33.64 
 
 		 226 aa  114  1.0000000000000001e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  32.86 
 
 		 233 aa  114  1.0000000000000001e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  36.87 
 
 		 218 aa  114  1.0000000000000001e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_1435  two component LuxR family transcriptional regulator  33.17 
 
 		 218 aa  114  1.0000000000000001e-24  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  32.24 
 
 		 220 aa  114  1.0000000000000001e-24  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  32.86 
 
 		 216 aa  113  2.0000000000000002e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_010338  Caul_0621  two component LuxR family transcriptional regulator  31.4 
 
 		 212 aa  113  2.0000000000000002e-24  Caulobacter sp. K31  Bacteria  normal  1  normal  0.881689 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  30.95 
 
 		 215 aa  113  2.0000000000000002e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  32.85 
 
 		 212 aa  113  2.0000000000000002e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  31.25 
 
 		 219 aa  113  2.0000000000000002e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  32.86 
 
 		 216 aa  114  2.0000000000000002e-24  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  33.82 
 
 		 218 aa  114  2.0000000000000002e-24  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  32.87 
 
 		 229 aa  114  2.0000000000000002e-24  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  32.54 
 
 		 219 aa  113  2.0000000000000002e-24  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.88 
 
 		 230 aa  113  2.0000000000000002e-24  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  34.76 
 
 		 213 aa  113  2.0000000000000002e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.624898 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  33.5 
 
 		 217 aa  112  3e-24  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  34.84 
 
 		 219 aa  112  3e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  33.5 
 
 		 228 aa  113  3e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  29.47 
 
 		 220 aa  112  3e-24  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  33.5 
 
 		 214 aa  112  4.0000000000000004e-24  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  32.71 
 
 		 218 aa  112  4.0000000000000004e-24  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  34.47 
 
 		 214 aa  112  4.0000000000000004e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
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