Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1616 |
Symbol | |
ID | 8252718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1917054 |
End bp | 1917686 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644935270 |
Product | response regulator receiver |
Protein accession | YP_003091891 |
Protein GI | 255531519 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.869432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAATC AGGCAGAAGC AAGAGTAGTT ATCATAGAAG ATGATCAAAC CATCAGAGAA GGCTATACCT ATCTGATCAA CAATACCTCC CCTTATCAGG TAGTCAATAC CTACCCCTCC TTTGATGCCG CAAGGCAAAA GATCGGCAGG GATAACCCTG ATGTGATTAT CCTGGATATA CAAATGCCAG GCACCAATGG CATAGATGCG CTTCCGCTGC TAAAAAAAAC CTTGCCGGAT GTGTATATCA TTATGTTAAC TGTACATGAA ACAGAAAAAA TCATTCTGGA GGCCCTGGCC AATGGTGCAT CAGGTTACTT TACAAAAAAC ACCCCTTCTT CAAAGATTAT TGAAGCCATT AAGGATGTTT TACAGGGCGG CGGCCCTATG AGCCCCAATG TTGCCAAAAA AGTCATCACT TCCCTGCAAA AAAACCCCGA TTCTCCACTC ACCAAAAGAG AAACCCAGAT ATTGAGTCTG ATGAGCAGGG GCAAAGACAG GTCTCAGATT GCAAATGAAT TGTTTATAGA GATTGAGACC GTAAAAACAC ACATCAAGAA CATCTACCTT AAACTCGATG TGAACTCAAA AGCAGATGCC ATTAAAGTTG CTAAAAATAA CCGGCTGGTC TGA
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Protein sequence | MQNQAEARVV IIEDDQTIRE GYTYLINNTS PYQVVNTYPS FDAARQKIGR DNPDVIILDI QMPGTNGIDA LPLLKKTLPD VYIIMLTVHE TEKIILEALA NGASGYFTKN TPSSKIIEAI KDVLQGGGPM SPNVAKKVIT SLQKNPDSPL TKRETQILSL MSRGKDRSQI ANELFIEIET VKTHIKNIYL KLDVNSKADA IKVAKNNRLV
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