More than 300 homologs were found in PanDaTox collection
for query gene Psyr_2059 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_2310  methyl-accepting chemotaxis sensory transducer  73.43 
 
 
492 aa  678    Pseudomonas putida KT2440  Bacteria  normal  0.178377  decreased coverage  0.00000773933 
 
 
-
 
NC_004578  PSPTO_2254  methyl-accepting chemotaxis protein  87.37 
 
 
491 aa  828    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.177753  n/a   
 
 
-
 
NC_009512  Pput_3459  methyl-accepting chemotaxis sensory transducer  73.63 
 
 
492 aa  691    Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.000433284 
 
 
-
 
NC_007005  Psyr_2059  histidine kinase, HAMP region: chemotaxis sensory transducer  100 
 
 
491 aa  988    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.116428  normal  0.539616 
 
 
-
 
NC_007492  Pfl01_4022  chemotaxis sensory transducer  75.66 
 
 
493 aa  726    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1912  methyl-accepting chemotaxis sensory transducer  73.02 
 
 
492 aa  679    Pseudomonas putida GB-1  Bacteria  normal  0.407863  hitchhiker  0.000000143908 
 
 
-
 
NC_010501  PputW619_1752  methyl-accepting chemotaxis sensory transducer  73.83 
 
 
492 aa  706    Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.000000224536 
 
 
-
 
NC_009656  PSPA7_2287  putative chemotaxis transducer  66.67 
 
 
490 aa  563  1.0000000000000001e-159  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0436901  n/a   
 
 
-
 
NC_008463  PA14_27000  putative chemotaxis transducer  66.06 
 
 
490 aa  560  1e-158  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2444  methyl-accepting chemotaxis sensory transducer  63.56 
 
 
489 aa  548  1e-154  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00221824  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  41.76 
 
 
541 aa  243  6e-63  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
541 aa  233  5e-60  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  41.39 
 
 
541 aa  233  6e-60  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  47.91 
 
 
679 aa  233  7.000000000000001e-60  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  44.87 
 
 
543 aa  231  3e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  45.05 
 
 
637 aa  229  6e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  40.11 
 
 
620 aa  228  2e-58  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  39.72 
 
 
638 aa  228  2e-58  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  40.29 
 
 
640 aa  228  2e-58  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  39.44 
 
 
552 aa  227  4e-58  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_004578  PSPTO_5554  methyl-accepting chemotaxis protein  41.43 
 
 
676 aa  227  5.0000000000000005e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  41.32 
 
 
552 aa  226  5.0000000000000005e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  37.46 
 
 
541 aa  226  6e-58  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_5093  histidine kinase, HAMP region: chemotaxis sensory transducer  41.71 
 
 
676 aa  225  2e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  44.05 
 
 
636 aa  223  4.9999999999999996e-57  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  37.57 
 
 
558 aa  223  4.9999999999999996e-57  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  36.74 
 
 
541 aa  223  6e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  38.81 
 
 
620 aa  223  9e-57  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  44.62 
 
 
572 aa  222  9.999999999999999e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  41.16 
 
 
712 aa  222  9.999999999999999e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  38.57 
 
 
620 aa  221  1.9999999999999999e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  40.4 
 
 
674 aa  221  1.9999999999999999e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  41.52 
 
 
650 aa  221  1.9999999999999999e-56  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  39.94 
 
 
541 aa  221  3e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  42.44 
 
 
541 aa  220  3.9999999999999997e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.71 
 
 
523 aa  220  5e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  41.8 
 
 
716 aa  219  1e-55  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  40.85 
 
 
712 aa  219  1e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  42.77 
 
 
541 aa  218  2e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  41.4 
 
 
638 aa  218  2.9999999999999998e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  42.54 
 
 
647 aa  218  2.9999999999999998e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
638 aa  218  2.9999999999999998e-55  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  43.49 
 
 
647 aa  217  2.9999999999999998e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_43220  putative methyl-accepting chemotaxis transducer  41.03 
 
 
652 aa  217  5e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.625872 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  39.5 
 
 
541 aa  216  5e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  39.94 
 
 
713 aa  217  5e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  37.05 
 
 
564 aa  216  5.9999999999999996e-55  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  41.35 
 
 
638 aa  216  9.999999999999999e-55  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3256  methyl-accepting chemotaxis protein  38.07 
 
 
558 aa  215  9.999999999999999e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
558 aa  216  9.999999999999999e-55  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  41.35 
 
 
638 aa  215  9.999999999999999e-55  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  37.25 
 
 
620 aa  215  1.9999999999999998e-54  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  41.08 
 
 
636 aa  215  1.9999999999999998e-54  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  40 
 
 
620 aa  215  1.9999999999999998e-54  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
NC_004578  PSPTO_1334  methyl-accepting chemotaxis protein  40.74 
 
 
550 aa  214  2.9999999999999995e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  41.09 
 
 
541 aa  214  2.9999999999999995e-54  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
620 aa  213  4.9999999999999996e-54  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
620 aa  213  4.9999999999999996e-54  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
620 aa  213  5.999999999999999e-54  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  40.18 
 
 
634 aa  212  1e-53  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  39.26 
 
 
596 aa  212  1e-53  Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  37.36 
 
 
637 aa  212  1e-53  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  37.89 
 
 
620 aa  212  2e-53  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  37.97 
 
 
621 aa  211  2e-53  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  41.03 
 
 
639 aa  212  2e-53  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  40.87 
 
 
662 aa  210  4e-53  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  40.22 
 
 
541 aa  210  4e-53  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  39.22 
 
 
620 aa  210  5e-53  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  36.13 
 
 
605 aa  210  5e-53  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_007005  Psyr_1150  chemotaxis sensory transducer  39.89 
 
 
551 aa  210  5e-53  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  38.07 
 
 
541 aa  210  5e-53  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  41.08 
 
 
639 aa  210  5e-53  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  32.99 
 
 
555 aa  210  5e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  41.04 
 
 
628 aa  210  6e-53  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  40.42 
 
 
638 aa  210  6e-53  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  38.31 
 
 
638 aa  210  6e-53  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  40.22 
 
 
541 aa  209  8e-53  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_009439  Pmen_2451  methyl-accepting chemotaxis sensory transducer  45.37 
 
 
655 aa  209  9e-53  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.932747 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  37.09 
 
 
554 aa  209  9e-53  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  44.93 
 
 
529 aa  209  9e-53  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  39.87 
 
 
739 aa  209  9e-53  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  41.76 
 
 
560 aa  209  1e-52  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  39.94 
 
 
628 aa  209  1e-52  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  39.26 
 
 
425 aa  207  2e-52  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  41.03 
 
 
629 aa  208  2e-52  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  40 
 
 
559 aa  208  2e-52  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  39.87 
 
 
638 aa  207  2e-52  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  42.07 
 
 
714 aa  208  2e-52  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  40.71 
 
 
638 aa  208  2e-52  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  40.7 
 
 
541 aa  208  2e-52  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  37.71 
 
 
573 aa  207  2e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  40.46 
 
 
541 aa  208  2e-52  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  39.55 
 
 
647 aa  207  3e-52  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  42.19 
 
 
738 aa  207  3e-52  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_010501  PputW619_0444  methyl-accepting chemotaxis sensory transducer  38.53 
 
 
647 aa  207  3e-52  Pseudomonas putida W619  Bacteria  normal  0.414929  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  41.67 
 
 
634 aa  207  4e-52  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  34.69 
 
 
554 aa  207  4e-52  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  37.5 
 
 
642 aa  207  5e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  41.79 
 
 
714 aa  207  5e-52  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  39.55 
 
 
647 aa  206  5e-52  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
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