More than 300 homologs were found in PanDaTox collection
for query gene RSP_0218 on replicon NC_007493
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009049  Rsph17029_1839  methyl-accepting chemotaxis sensory transducer  99.27 
 
 
687 aa  1332    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0218  methyl accepting chemotaxis protein  100 
 
 
687 aa  1342    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009431  Rsph17025_4286  hypothetical protein  59.1 
 
 
687 aa  729    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3576  methyl-accepting chemotaxis sensory transducer  28.61 
 
 
772 aa  273  1e-71  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0207298 
 
 
-
 
NC_009456  VC0395_0185  methyl-accepting chemotaxis protein  31.21 
 
 
770 aa  257  5e-67  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0559  methyl-accepting chemotaxis sensory transducer  28.9 
 
 
773 aa  257  5e-67  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  29.77 
 
 
773 aa  244  5e-63  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_007912  Sde_3112  putative methyl-accepting chemotaxis sensory transducer  30.17 
 
 
1029 aa  216  9e-55  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1002  methyl-accepting chemotaxis protein-like protein  25.83 
 
 
1100 aa  202  9.999999999999999e-51  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0230  methyl-accepting chemotaxis sensory transducer  39.68 
 
 
963 aa  199  2.0000000000000003e-49  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1547  adenylate/guanylate cyclase with integral membrane sensor  28.89 
 
 
758 aa  180  8e-44  Cyanothece sp. PCC 7425  Bacteria  normal  0.592629  normal 
 
 
-
 
NC_007519  Dde_0458  methyl-accepting chemotaxis sensory transducer  29.34 
 
 
726 aa  174  3.9999999999999995e-42  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.386076  n/a   
 
 
-
 
NC_003910  CPS_3925  methyl-accepting chemotaxis protein  26.89 
 
 
674 aa  171  4e-41  Colwellia psychrerythraea 34H  Bacteria  normal  0.903723  n/a   
 
 
-
 
NC_008322  Shewmr7_3758  methyl-accepting chemotaxis sensory transducer  28.82 
 
 
651 aa  169  2e-40  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0030  putative methyl-accepting chemotaxis sensory transducer  27.93 
 
 
660 aa  168  2e-40  Shewanella amazonensis SB2B  Bacteria  normal  0.136855  normal  0.0162002 
 
 
-
 
NC_008577  Shewana3_0264  methyl-accepting chemotaxis sensory transducer  28.38 
 
 
651 aa  169  2e-40  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.00000238421 
 
 
-
 
NC_009438  Sputcn32_0380  methyl-accepting chemotaxis sensory transducer  27.7 
 
 
651 aa  162  1e-38  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4466  methyl-accepting chemotaxis protein  28.79 
 
 
651 aa  161  4e-38  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007575  Suden_1932  methyl-accepting chemotaxis sensory transducer  25.39 
 
 
682 aa  158  2e-37  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0270  methyl-accepting chemotaxis sensory transducer  26.62 
 
 
651 aa  158  3e-37  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0274  methyl-accepting chemotaxis sensory transducer  26.62 
 
 
651 aa  158  3e-37  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0266  methyl-accepting chemotaxis sensory transducer  26.62 
 
 
651 aa  158  3e-37  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0274  methyl-accepting chemotaxis sensory transducer  26.68 
 
 
651 aa  157  6e-37  Shewanella baltica OS155  Bacteria  normal  0.292308  n/a   
 
 
-
 
NC_010506  Swoo_1055  diguanylate cyclase  26.32 
 
 
598 aa  154  7e-36  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1027  methyl-accepting chemotaxis sensory transducer  32.39 
 
 
795 aa  153  1e-35  Ruegeria sp. TM1040  Bacteria  normal  normal  0.551962 
 
 
-
 
NC_011769  DvMF_1698  methyl-accepting chemotaxis sensory transducer  37.61 
 
 
963 aa  142  1.9999999999999998e-32  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  35.52 
 
 
730 aa  142  3e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  35.97 
 
 
567 aa  139  2e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0225  adenylate/guanylate cyclase with integral membrane sensor  32.18 
 
 
695 aa  139  2e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.590775  normal  0.132241 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  33.7 
 
 
563 aa  139  2e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  36.92 
 
 
656 aa  137  5e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_008044  TM1040_2453  methyl-accepting chemotaxis sensory transducer  32.01 
 
 
788 aa  137  7.000000000000001e-31  Ruegeria sp. TM1040  Bacteria  normal  0.925334  normal  0.122382 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
730 aa  136  9.999999999999999e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  34.53 
 
 
694 aa  136  9.999999999999999e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  33.7 
 
 
731 aa  135  1.9999999999999998e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  33.33 
 
 
714 aa  134  3.9999999999999996e-30  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  33.09 
 
 
674 aa  134  6e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.94 
 
 
716 aa  134  6.999999999999999e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  34.06 
 
 
688 aa  132  3e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  38 
 
 
656 aa  131  4.0000000000000003e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  33.81 
 
 
565 aa  131  4.0000000000000003e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  34.96 
 
 
561 aa  131  5.0000000000000004e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  33.09 
 
 
567 aa  130  6e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  36.63 
 
 
563 aa  130  1.0000000000000001e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  34.93 
 
 
563 aa  129  1.0000000000000001e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  34.93 
 
 
563 aa  130  1.0000000000000001e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  34.19 
 
 
563 aa  129  1.0000000000000001e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3476  methyl-accepting chemotaxis sensory transducer  38.75 
 
 
641 aa  129  2.0000000000000002e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.640734  normal 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  33.7 
 
 
563 aa  128  3e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  32.73 
 
 
568 aa  128  4.0000000000000003e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
566 aa  128  4.0000000000000003e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
566 aa  128  4.0000000000000003e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  36.25 
 
 
656 aa  128  4.0000000000000003e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007406  Nwi_0530  methyl-accepting chemotaxis protein  32.12 
 
 
569 aa  127  5e-28  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.667624  normal 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  36.74 
 
 
676 aa  128  5e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  34.67 
 
 
670 aa  127  5e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  35.34 
 
 
565 aa  127  7e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  33.33 
 
 
688 aa  127  7e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_009485  BBta_2843  putative histidine kinase, HAMP region  38.12 
 
 
682 aa  127  8.000000000000001e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  37.25 
 
 
675 aa  127  8.000000000000001e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  34.07 
 
 
542 aa  126  1e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  37.2 
 
 
691 aa  126  1e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_011769  DvMF_1118  methyl-accepting chemotaxis sensory transducer  30.86 
 
 
913 aa  126  1e-27  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  32.85 
 
 
672 aa  126  1e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  36.21 
 
 
741 aa  126  1e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.75 
 
 
564 aa  125  2e-27  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0632  chemotaxis sensory transducer  38.12 
 
 
736 aa  126  2e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.180969  n/a   
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  37.32 
 
 
561 aa  126  2e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  37.32 
 
 
561 aa  126  2e-27  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_009565  TBFG_12462  cyclase  26.12 
 
 
730 aa  125  2e-27  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4791  methyl-accepting chemotaxis sensory transducer  41.06 
 
 
434 aa  126  2e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3377  methyl-accepting chemotaxis sensory transducer  32.6 
 
 
563 aa  126  2e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.528008  normal 
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  39.21 
 
 
655 aa  126  2e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  34.85 
 
 
563 aa  125  3e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  32.85 
 
 
673 aa  125  3e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  35.77 
 
 
691 aa  124  5e-27  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  33.82 
 
 
573 aa  124  5e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007925  RPC_3475  methyl-accepting chemotaxis sensory transducer  41.31 
 
 
649 aa  124  5e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3344  methyl-accepting chemotaxis sensory transducer  38.04 
 
 
561 aa  124  6e-27  Methylobacterium populi BJ001  Bacteria  normal  0.828703  normal 
 
 
-
 
NC_007925  RPC_4101  methyl-accepting chemotaxis sensory transducer  37.96 
 
 
698 aa  124  6e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0489  methyl-accepting chemotaxis sensory transducer  33.46 
 
 
564 aa  124  7e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.301128  normal 
 
 
-
 
NC_007925  RPC_2457  methyl-accepting chemotaxis sensory transducer  32.25 
 
 
665 aa  124  7e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0375918  normal  0.509707 
 
 
-
 
NC_009485  BBta_2902  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
563 aa  124  7e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.32606  normal  0.0943242 
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  33.7 
 
 
563 aa  124  8e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  32.61 
 
 
688 aa  123  9e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  34.89 
 
 
566 aa  123  9e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  38.62 
 
 
688 aa  123  9e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  35.66 
 
 
674 aa  123  9.999999999999999e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  32.97 
 
 
572 aa  123  9.999999999999999e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  34.9 
 
 
562 aa  122  1.9999999999999998e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  32.97 
 
 
689 aa  122  1.9999999999999998e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_007925  RPC_0061  methyl-accepting chemotaxis sensory transducer  37.08 
 
 
674 aa  122  1.9999999999999998e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  36.05 
 
 
667 aa  122  1.9999999999999998e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
563 aa  122  1.9999999999999998e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  33.94 
 
 
577 aa  122  1.9999999999999998e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  35.61 
 
 
561 aa  122  1.9999999999999998e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  34.22 
 
 
561 aa  121  3e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  35.61 
 
 
565 aa  122  3e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  33.94 
 
 
563 aa  122  3e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  32.01 
 
 
561 aa  122  3e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
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