More than 300 homologs were found in PanDaTox collection
for query gene Rsph17025_4286 on replicon NC_009431
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007493  RSP_0218  methyl accepting chemotaxis protein  59.1 
 
 
687 aa  674    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009431  Rsph17025_4286  hypothetical protein  100 
 
 
687 aa  1368    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_1839  methyl-accepting chemotaxis sensory transducer  59.39 
 
 
687 aa  678    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3576  methyl-accepting chemotaxis sensory transducer  29.81 
 
 
772 aa  279  1e-73  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0207298 
 
 
-
 
NC_009456  VC0395_0185  methyl-accepting chemotaxis protein  32.44 
 
 
770 aa  263  4.999999999999999e-69  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0559  methyl-accepting chemotaxis sensory transducer  30.46 
 
 
773 aa  249  2e-64  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  29.56 
 
 
773 aa  242  1e-62  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_007912  Sde_3112  putative methyl-accepting chemotaxis sensory transducer  30.9 
 
 
1029 aa  203  9.999999999999999e-51  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1002  methyl-accepting chemotaxis protein-like protein  25.69 
 
 
1100 aa  202  1.9999999999999998e-50  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0230  methyl-accepting chemotaxis sensory transducer  41.06 
 
 
963 aa  190  8e-47  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1547  adenylate/guanylate cyclase with integral membrane sensor  28.57 
 
 
758 aa  174  5.999999999999999e-42  Cyanothece sp. PCC 7425  Bacteria  normal  0.592629  normal 
 
 
-
 
NC_008577  Shewana3_0264  methyl-accepting chemotaxis sensory transducer  31.91 
 
 
651 aa  172  2e-41  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.00000238421 
 
 
-
 
NC_007519  Dde_0458  methyl-accepting chemotaxis sensory transducer  29.92 
 
 
726 aa  171  5e-41  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.386076  n/a   
 
 
-
 
NC_011769  DvMF_1698  methyl-accepting chemotaxis sensory transducer  30.42 
 
 
963 aa  169  1e-40  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008700  Sama_0030  putative methyl-accepting chemotaxis sensory transducer  27.76 
 
 
660 aa  169  2e-40  Shewanella amazonensis SB2B  Bacteria  normal  0.136855  normal  0.0162002 
 
 
-
 
NC_003910  CPS_3925  methyl-accepting chemotaxis protein  28.14 
 
 
674 aa  163  1e-38  Colwellia psychrerythraea 34H  Bacteria  normal  0.903723  n/a   
 
 
-
 
NC_008322  Shewmr7_3758  methyl-accepting chemotaxis sensory transducer  30.04 
 
 
651 aa  162  2e-38  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4466  methyl-accepting chemotaxis protein  28.76 
 
 
651 aa  156  1e-36  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_1055  diguanylate cyclase  32.27 
 
 
598 aa  156  1e-36  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_1932  methyl-accepting chemotaxis sensory transducer  28.48 
 
 
682 aa  154  5.9999999999999996e-36  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0380  methyl-accepting chemotaxis sensory transducer  28.96 
 
 
651 aa  150  9e-35  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0270  methyl-accepting chemotaxis sensory transducer  28.54 
 
 
651 aa  145  2e-33  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0274  methyl-accepting chemotaxis sensory transducer  28.54 
 
 
651 aa  145  2e-33  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0266  methyl-accepting chemotaxis sensory transducer  28.54 
 
 
651 aa  145  2e-33  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0274  methyl-accepting chemotaxis sensory transducer  28.63 
 
 
651 aa  144  5e-33  Shewanella baltica OS155  Bacteria  normal  0.292308  n/a   
 
 
-
 
NC_012669  Bcav_0225  adenylate/guanylate cyclase with integral membrane sensor  32.46 
 
 
695 aa  143  9.999999999999999e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.590775  normal  0.132241 
 
 
-
 
NC_008044  TM1040_1027  methyl-accepting chemotaxis sensory transducer  30.97 
 
 
795 aa  141  4.999999999999999e-32  Ruegeria sp. TM1040  Bacteria  normal  normal  0.551962 
 
 
-
 
NC_011769  DvMF_1118  methyl-accepting chemotaxis sensory transducer  34.48 
 
 
913 aa  134  7.999999999999999e-30  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  33.81 
 
 
562 aa  133  1.0000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_009485  BBta_2843  putative histidine kinase, HAMP region  34.89 
 
 
682 aa  132  1.0000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  32.73 
 
 
730 aa  132  2.0000000000000002e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  34.46 
 
 
573 aa  130  6e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  33.09 
 
 
602 aa  130  8.000000000000001e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4013  methyl-accepting chemotaxis protein  27.88 
 
 
756 aa  130  9.000000000000001e-29  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0061  methyl-accepting chemotaxis sensory transducer  38.03 
 
 
674 aa  129  2.0000000000000002e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12462  cyclase  26.7 
 
 
730 aa  129  2.0000000000000002e-28  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  36.29 
 
 
676 aa  129  3e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_011004  Rpal_2142  methyl-accepting chemotaxis sensory transducer  33.21 
 
 
428 aa  127  5e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.293169  n/a   
 
 
-
 
NC_010725  Mpop_4356  methyl-accepting chemotaxis sensory transducer  27.26 
 
 
716 aa  126  1e-27  Methylobacterium populi BJ001  Bacteria  normal  normal  0.816147 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.34 
 
 
716 aa  126  1e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  33.94 
 
 
674 aa  126  2e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  33.45 
 
 
731 aa  125  2e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  35.02 
 
 
565 aa  125  3e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_010511  M446_0619  methyl-accepting chemotaxis sensory transducer  36.44 
 
 
561 aa  125  3e-27  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0130228 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  32.48 
 
 
567 aa  125  4e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  33.87 
 
 
672 aa  124  5e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1935  methyl-accepting chemotaxis sensory transducer  35.13 
 
 
530 aa  124  6e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.376441  normal 
 
 
-
 
NC_011899  Hore_22670  methyl-accepting chemotaxis sensory transducer  32.43 
 
 
737 aa  124  6e-27  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_5373  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
565 aa  124  6e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.620524  normal  0.472724 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  30.94 
 
 
730 aa  123  9e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  33.7 
 
 
689 aa  123  9e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
563 aa  123  9.999999999999999e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  32.01 
 
 
675 aa  123  9.999999999999999e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_010725  Mpop_0223  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
565 aa  123  9.999999999999999e-27  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_2453  methyl-accepting chemotaxis sensory transducer  26.72 
 
 
788 aa  122  1.9999999999999998e-26  Ruegeria sp. TM1040  Bacteria  normal  0.925334  normal  0.122382 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  32.61 
 
 
572 aa  122  1.9999999999999998e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  33.21 
 
 
688 aa  122  1.9999999999999998e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  33.47 
 
 
673 aa  122  3e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  32.61 
 
 
691 aa  122  3e-26  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  34.96 
 
 
563 aa  121  3.9999999999999996e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2902  methyl-accepting chemotaxis sensory transducer  34.77 
 
 
563 aa  121  3.9999999999999996e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.32606  normal  0.0943242 
 
 
-
 
NC_009485  BBta_1536  methyl-accepting chemotaxis protein  34.39 
 
 
716 aa  121  3.9999999999999996e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.284447 
 
 
-
 
NC_007925  RPC_2846  methyl-accepting chemotaxis sensory transducer  34.87 
 
 
565 aa  121  3.9999999999999996e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.430745  normal 
 
 
-
 
NC_010172  Mext_0809  chemotaxis sensory transducer  26.07 
 
 
717 aa  121  3.9999999999999996e-26  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  28.78 
 
 
626 aa  121  4.9999999999999996e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_007643  Rru_A1197  chemotaxis sensory transducer  36.84 
 
 
688 aa  121  4.9999999999999996e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  33.72 
 
 
542 aa  121  4.9999999999999996e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  33.45 
 
 
563 aa  121  4.9999999999999996e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  33.87 
 
 
674 aa  121  4.9999999999999996e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  34.02 
 
 
587 aa  120  7e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  35.34 
 
 
561 aa  120  9e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  32.85 
 
 
688 aa  120  9e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_011757  Mchl_5231  methyl-accepting chemotaxis sensory transducer  34.7 
 
 
416 aa  120  9.999999999999999e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.544234  normal  0.123182 
 
 
-
 
NC_010505  Mrad2831_2471  methyl-accepting chemotaxis sensory transducer  28.31 
 
 
718 aa  119  9.999999999999999e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0242034  normal 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  34.02 
 
 
561 aa  119  9.999999999999999e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_010172  Mext_4764  chemotaxis sensory transducer  34.7 
 
 
416 aa  120  9.999999999999999e-26  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  31.88 
 
 
566 aa  119  1.9999999999999998e-25  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2906  putative methyl-accepting chemotaxis protein  35.17 
 
 
564 aa  119  1.9999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.430156  normal  0.106702 
 
 
-
 
NC_007964  Nham_0772  methyl-accepting chemotaxis sensory transducer  34.51 
 
 
561 aa  119  1.9999999999999998e-25  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  33.86 
 
 
691 aa  119  1.9999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  33.46 
 
 
741 aa  119  1.9999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  35.5 
 
 
560 aa  119  1.9999999999999998e-25  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_007925  RPC_3475  methyl-accepting chemotaxis sensory transducer  35.63 
 
 
649 aa  119  1.9999999999999998e-25  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
694 aa  119  1.9999999999999998e-25  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  34.1 
 
 
562 aa  119  1.9999999999999998e-25  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_010172  Mext_0667  chemotaxis sensory transducer  34.21 
 
 
565 aa  119  1.9999999999999998e-25  Methylobacterium extorquens PA1  Bacteria  normal  0.510632  normal  0.195802 
 
 
-
 
NC_011757  Mchl_0679  methyl-accepting chemotaxis sensory transducer  34.21 
 
 
565 aa  119  1.9999999999999998e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0248904 
 
 
-
 
NC_007925  RPC_4101  methyl-accepting chemotaxis sensory transducer  35.65 
 
 
698 aa  118  3e-25  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.48 
 
 
564 aa  118  3.9999999999999997e-25  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  32.25 
 
 
675 aa  118  3.9999999999999997e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
563 aa  118  3.9999999999999997e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  32.25 
 
 
563 aa  118  3.9999999999999997e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  32.86 
 
 
552 aa  118  3.9999999999999997e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  32.13 
 
 
688 aa  118  3.9999999999999997e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  33.97 
 
 
688 aa  117  5e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  32.73 
 
 
568 aa  117  5e-25  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  32.37 
 
 
567 aa  117  5e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0752  methyl-accepting chemotaxis sensory transducer  25.9 
 
 
716 aa  117  6e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.713683  normal 
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  27.7 
 
 
627 aa  117  6e-25  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  32.85 
 
 
563 aa  117  6.9999999999999995e-25  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
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