More than 300 homologs were found in PanDaTox collection
for query gene SO_4466 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009997  Sbal195_0274  methyl-accepting chemotaxis sensory transducer  85.1 
 
 
651 aa  1115    Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4466  methyl-accepting chemotaxis protein  100 
 
 
651 aa  1326    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_0380  methyl-accepting chemotaxis sensory transducer  84.49 
 
 
651 aa  1109    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0274  methyl-accepting chemotaxis sensory transducer  84.95 
 
 
651 aa  1112    Shewanella baltica OS155  Bacteria  normal  0.292308  n/a   
 
 
-
 
NC_009665  Shew185_0266  methyl-accepting chemotaxis sensory transducer  85.1 
 
 
651 aa  1115    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0264  methyl-accepting chemotaxis sensory transducer  89.86 
 
 
651 aa  1144    Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.00000238421 
 
 
-
 
NC_008322  Shewmr7_3758  methyl-accepting chemotaxis sensory transducer  90.32 
 
 
651 aa  1147    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0270  methyl-accepting chemotaxis sensory transducer  85.1 
 
 
651 aa  1115    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0030  putative methyl-accepting chemotaxis sensory transducer  36.19 
 
 
660 aa  403  1e-111  Shewanella amazonensis SB2B  Bacteria  normal  0.136855  normal  0.0162002 
 
 
-
 
NC_003910  CPS_3925  methyl-accepting chemotaxis protein  31.12 
 
 
674 aa  310  5e-83  Colwellia psychrerythraea 34H  Bacteria  normal  0.903723  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  31.54 
 
 
773 aa  266  1e-69  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_007519  Dde_0458  methyl-accepting chemotaxis sensory transducer  31.6 
 
 
726 aa  248  2e-64  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.386076  n/a   
 
 
-
 
NC_009456  VC0395_0185  methyl-accepting chemotaxis protein  32.67 
 
 
770 aa  247  4.9999999999999997e-64  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3576  methyl-accepting chemotaxis sensory transducer  31.47 
 
 
772 aa  229  1e-58  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0207298 
 
 
-
 
NC_010506  Swoo_0559  methyl-accepting chemotaxis sensory transducer  30.51 
 
 
773 aa  229  2e-58  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_1932  methyl-accepting chemotaxis sensory transducer  26.53 
 
 
682 aa  196  1e-48  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1698  methyl-accepting chemotaxis sensory transducer  30.19 
 
 
963 aa  184  3e-45  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009831  Ssed_0529  methyl-accepting chemotaxis protein-like protein  34.45 
 
 
677 aa  178  2e-43  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0230  methyl-accepting chemotaxis sensory transducer  26.86 
 
 
963 aa  177  5e-43  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2264  methyl-accepting chemotaxis sensory transducer  40.07 
 
 
819 aa  177  6e-43  Desulfovibrio vulgaris DP4  Bacteria  normal  0.636482  normal 
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  31.13 
 
 
646 aa  174  5e-42  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  36.16 
 
 
640 aa  173  6.999999999999999e-42  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_008700  Sama_2502  putative methyl-accepting chemotaxis sensory transducer  32.19 
 
 
649 aa  170  7e-41  Shewanella amazonensis SB2B  Bacteria  normal  0.988754  normal 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  33.7 
 
 
544 aa  169  1e-40  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  33.6 
 
 
543 aa  169  1e-40  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  35.62 
 
 
629 aa  169  2e-40  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  36.29 
 
 
541 aa  166  1.0000000000000001e-39  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  33.7 
 
 
619 aa  166  1.0000000000000001e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  33.52 
 
 
650 aa  165  2.0000000000000002e-39  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  35.47 
 
 
633 aa  165  2.0000000000000002e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  32.18 
 
 
714 aa  165  2.0000000000000002e-39  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  31.18 
 
 
674 aa  165  2.0000000000000002e-39  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1353  methyl-accepting chemotaxis sensory transducer  31.34 
 
 
547 aa  166  2.0000000000000002e-39  Pseudomonas mendocina ymp  Bacteria  normal  0.769572  normal 
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  31.22 
 
 
688 aa  165  3e-39  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_009656  PSPA7_3666  chemotaxis transducer  36.07 
 
 
541 aa  165  3e-39  Pseudomonas aeruginosa PA7  Bacteria  normal  0.260935  n/a   
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  32.78 
 
 
714 aa  165  3e-39  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2907  chemotaxis sensory transducer  36.54 
 
 
541 aa  164  5.0000000000000005e-39  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.300582 
 
 
-
 
NC_008740  Maqu_3809  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
547 aa  163  1e-38  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  31.74 
 
 
688 aa  163  1e-38  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  32.99 
 
 
688 aa  162  1e-38  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_1055  diguanylate cyclase  34.18 
 
 
598 aa  162  3e-38  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  31.37 
 
 
715 aa  161  3e-38  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  35.67 
 
 
624 aa  160  7e-38  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  32.77 
 
 
642 aa  160  9e-38  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  34.16 
 
 
638 aa  159  1e-37  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  34.04 
 
 
541 aa  159  2e-37  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  31.09 
 
 
688 aa  159  2e-37  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  34.04 
 
 
541 aa  159  2e-37  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  34.15 
 
 
541 aa  159  2e-37  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  32.91 
 
 
541 aa  159  2e-37  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  32.42 
 
 
541 aa  158  2e-37  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  33.51 
 
 
541 aa  158  3e-37  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  31.26 
 
 
560 aa  158  3e-37  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_007954  Sden_2891  chemotaxis sensory transducer  32.21 
 
 
673 aa  158  4e-37  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  31.17 
 
 
714 aa  157  5.0000000000000005e-37  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_004578  PSPTO_1334  methyl-accepting chemotaxis protein  33.52 
 
 
550 aa  157  7e-37  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0672  methyl-accepting chemotaxis sensory transducer  31.09 
 
 
568 aa  157  8e-37  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  30.83 
 
 
671 aa  157  8e-37  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_009901  Spea_0859  methyl-accepting chemotaxis sensory transducer  32.16 
 
 
673 aa  156  9e-37  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1150  chemotaxis sensory transducer  32.76 
 
 
551 aa  156  1e-36  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  34.36 
 
 
640 aa  156  1e-36  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  33.96 
 
 
541 aa  155  1e-36  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  32.92 
 
 
564 aa  156  1e-36  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  35.31 
 
 
541 aa  155  2e-36  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0931  methyl-accepting chemotaxis sensory transducer  35.04 
 
 
541 aa  155  2e-36  Shewanella baltica OS195  Bacteria  normal  normal  0.476721 
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  31.79 
 
 
640 aa  155  2e-36  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009431  Rsph17025_4286  hypothetical protein  28.57 
 
 
687 aa  155  2e-36  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  35.09 
 
 
541 aa  155  2e-36  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  35.31 
 
 
541 aa  155  2e-36  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  36.72 
 
 
647 aa  155  2e-36  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  27.84 
 
 
628 aa  155  2.9999999999999998e-36  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0210  methyl-accepting chemotaxis protein  32.96 
 
 
543 aa  155  2.9999999999999998e-36  Vibrio cholerae O395  Bacteria  decreased coverage  0.000000000000824359  n/a   
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  35.53 
 
 
681 aa  155  2.9999999999999998e-36  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_007912  Sde_3112  putative methyl-accepting chemotaxis sensory transducer  35.23 
 
 
1029 aa  155  2.9999999999999998e-36  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1491  histidine kinase, HAMP region: chemotaxis sensory transducer  35.99 
 
 
539 aa  154  5e-36  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.95 
 
 
523 aa  154  5.9999999999999996e-36  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_004578  PSPTO_4624  methyl-accepting chemotaxis protein  35.99 
 
 
539 aa  154  7e-36  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.140064  n/a   
 
 
-
 
NC_011663  Sbal223_0921  methyl-accepting chemotaxis sensory transducer  35.31 
 
 
541 aa  153  7e-36  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_5159  methyl-accepting chemotaxis protein  34.25 
 
 
638 aa  153  8e-36  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0341  methyl-accepting chemotaxis sensory transducer  31.55 
 
 
544 aa  152  1e-35  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2301  methyl-accepting chemotaxis sensory transducer  31.64 
 
 
632 aa  152  2e-35  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  35.04 
 
 
676 aa  152  2e-35  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  33.88 
 
 
541 aa  152  2e-35  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_007005  Psyr_1789  chemotaxis sensory transducer  31.27 
 
 
546 aa  152  2e-35  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.478165  decreased coverage  0.000703042 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  31.99 
 
 
627 aa  152  2e-35  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  33.06 
 
 
674 aa  152  2e-35  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  31.35 
 
 
557 aa  152  2e-35  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  32.04 
 
 
647 aa  151  3e-35  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  30.09 
 
 
561 aa  151  4e-35  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  34.96 
 
 
640 aa  151  4e-35  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  34.19 
 
 
638 aa  150  5e-35  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_1714  methyl-accepting chemotaxis sensory transducer  31.78 
 
 
673 aa  150  5e-35  Halorhodospira halophila SL1  Bacteria  normal  0.712235  n/a   
 
 
-
 
NC_010501  PputW619_2593  methyl-accepting chemotaxis sensory transducer  33.24 
 
 
540 aa  150  6e-35  Pseudomonas putida W619  Bacteria  normal  normal  0.591477 
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  29.94 
 
 
561 aa  150  6e-35  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_013457  VEA_001261  methyl-accepting chemotaxis protein  36.73 
 
 
547 aa  150  6e-35  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  32.49 
 
 
642 aa  150  8e-35  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  31.04 
 
 
623 aa  150  8e-35  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3685  methyl-accepting chemotaxis protein  30.52 
 
 
546 aa  150  9e-35  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  30.93 
 
 
738 aa  150  9e-35  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  30.51 
 
 
559 aa  149  1.0000000000000001e-34  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
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