Gene RSP_0218 details

Gene Information

• Locus tag: RSP_0218
• Symbol: mcpM
• ID: 3719377
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: -
• Start bp: 1932095
• End bp: 1934158
• Gene Length: 2064 bp
• Protein Length: 687 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640071424
• Product: methyl accepting chemotaxis protein
• Protein accession: YP_353290
• Protein GI: 77463786
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTGCTC TGGTCTGGAT TTTCCGGTTT CGCGTCAAGA TCACGCTGGC GCTGCTGCTG 
GCGGGGCTTC TGCCGGCCGC GGCCATCCTG ACGCTCGATA CTTCGCGCCT CCGGGAGGCC 
GCGCAGGCTT CGGTCGAGGC GGAGCTCGAA CTCGCCGCCG ACATGAAGGA GGCACAGATC 
CAGACGTGGT TCGCCACGCT GGTGCGTATC GGGCAAAGCC TCGCCGACAA TCCCGCCACG 
CTTGCAGCCC TCGACGAGTT CGCCCGTGGC CGGGCCGGGC TTCTGGCCGA TCCCGCCTTC 
CGGGTCGACG AGGCGCGACT GACCGAGCGG TACGACCTGC AGTTGCAGGC GACGCGCGGC 
GCGGAGGCGG GGGCGCAGAA GGAATGGATG GCGCTCGACG AGGGGGCGCG GCGGCTCCAG 
CATCTCTATG TCTCGGCCAA CCCGAAGCCC GTGGGCGAGA AGCACCGGCT CGATGATGCC 
GGCGACGGCA GCGCCTATTC GGCCGCCCAC CGCCGGCATC ATCCGTTCCT GCGCGGCTAT 
CTCGAACGCT TCGGCTTGTA CGACCTGTTT CTGATCGAGC CCGAGAACGG CACAATCCTC 
TATACGGTCT TCAAGGAGAC CGATTTCGGC ACCTCGCTCT TTTCCGGCCC CTACCGCGAC 
AGCGCCTTCG CCCGGACCGC GCAGAGGATG GCGAAGCAAG GCGGGCGCGA CCCGTTTCTG 
ATCGCCGATT TCGAGCCCTA TGCGCCCTCC TACAACGCAC ATGCGGGCTT CATCCTGCTG 
CCGTTGCAGA AGGATGGCAC CCTTGTCGGC ATCCTCGCCT TCCAGATCCC GATCGAGCCT 
CTGAACGAGA TCATGCGCCG CAAGCTCGGC CGGTTCGAGA CGTCGGACGG TTATCTGGTG 
GGGGCGGACG GGCGCCTTCG CTCGGTGCCG CGGCGGGCGG CCGACATCGA GGTCGGGACG 
CCGGTGGCGG GGCCGGTGGC CGCGGCCGCA CGGGCGGGCA AGGCGGAAAG CCTCGAAGGC 
GCGAATTTCG GCGGCGAGCC GATGGTGGCC GCGGTACGGC CCGCCCGGAT CGGCGGGATG 
ACCTGGGGGA TGGTGTCCGA GATCACGGCC GAGGAAGCCT TCGCCGAGGC GCGCGCGGCA 
CTTCGGACGG CGAGGGTGAC GGCGGCGGCT TTGGCGGGGT TGATCCTGAT CGCGGGGCTT 
CTGCTGTCGG CCTGGCTGAT CCGGCCGATC CGCCGGCTGT CGCGCCACAT CGAAGAGGAG 
GCCGGCCGTG CGGTCGAAGC CTTGGGAACC GCCTCGACGC GGGTGGCAAC GGCGGCCGGG 
AAGATGGTGG TGACCGCCGA GGAAGCCGGC CGGCAGAGCC GGGAGGTGCG GGAGAACTCG 
CGGCTTGCCG CCACCAATGT CGCGACCGTT GCCTCGGCGG CCGAGGAGAT GTCGGCCTCG 
GCGCAGGAGG TGGTGCAGGG TGTGGTTCGC ACCAGCCGCC TGATCGAGGA GACGACCGCG 
CGAACCGGCG CGGCGCAGAC CTCGCTCGAG GCGTTGGAGA GCGCCACCGG CCGCATCCGG 
GGCGTGGTCT CCTTCATCGA GGGGATCGCG CGAAAGACCG ACCTTCTGGC ATTGAATGCT 
GCGGTCGAGG CGGCACGGGC AGGCGAGGCG GGCCGCGGCT TCGCGGTGGT GGCCGAAGAG 
GTGCGCAAGC TTGCCGCGCT GACCACCAGT TCCACCGGCG AGATCGCCGC CGAGGTGGGG 
GCGGTGACGG GCGCGGTCGA GGCCAATGGC GCGGCCGTGC GCGGCATCGT CGAGGCGGTC 
GGTCAGGTGC AGGCGCAGGC GCGGCTGATT TCCGTCGCGG CCGGACAGCA GGGCGCCGTC 
GCGGCCGAAA TCGCCTCGCG CATGGCCGAC ACCGCAGAGC GCGTGGCCCG CGTCGATCAC 
GGAATTGCCG GCGTCGAAGA GGCCTCGACC GATGCGGCCG CCACCGCAAA GGGGCTGACG 
GCCGAGATGG AGACGATGGA CACCGCCGCA ACTGCCATGG GCGCGGCCGT GACCGACTTC 
GCCGCGATGG TCCGAGACCT CTGA 

 

Protein sequence

MRALVWIFRF RVKITLALLL AGLLPAAAIL TLDTSRLREA AQASVEAELE LAADMKEAQI 
QTWFATLVRI GQSLADNPAT LAALDEFARG RAGLLADPAF RVDEARLTER YDLQLQATRG 
AEAGAQKEWM ALDEGARRLQ HLYVSANPKP VGEKHRLDDA GDGSAYSAAH RRHHPFLRGY 
LERFGLYDLF LIEPENGTIL YTVFKETDFG TSLFSGPYRD SAFARTAQRM AKQGGRDPFL 
IADFEPYAPS YNAHAGFILL PLQKDGTLVG ILAFQIPIEP LNEIMRRKLG RFETSDGYLV 
GADGRLRSVP RRAADIEVGT PVAGPVAAAA RAGKAESLEG ANFGGEPMVA AVRPARIGGM 
TWGMVSEITA EEAFAEARAA LRTARVTAAA LAGLILIAGL LLSAWLIRPI RRLSRHIEEE 
AGRAVEALGT ASTRVATAAG KMVVTAEEAG RQSREVRENS RLAATNVATV ASAAEEMSAS 
AQEVVQGVVR TSRLIEETTA RTGAAQTSLE ALESATGRIR GVVSFIEGIA RKTDLLALNA 
AVEAARAGEA GRGFAVVAEE VRKLAALTTS STGEIAAEVG AVTGAVEANG AAVRGIVEAV 
GQVQAQARLI SVAAGQQGAV AAEIASRMAD TAERVARVDH GIAGVEEAST DAAATAKGLT 
AEMETMDTAA TAMGAAVTDF AAMVRDL