Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0380 |
Symbol | |
ID | 5081314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 411424 |
End bp | 413379 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640497500 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001181911 |
Protein GI | 146291487 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTTTTA CTCGTAAAAT TCAGCTTATC AGTTTATTAA TTGTCCTATT ACCCCTCATT TTTGCTACAG CAATAGTAAC TTATATTGCT CGGGATGAAT TGTTTGCCGA GGCTCAGTCT CGTTTAGTGG CTGTGCGTGA GATCAAGCAG CGGCAAATTG TGAGTATGTT TCAGGACTTT TCCGATAATC TTCAGGCCGT CAGCGCCGTA ATCGCCAGCC AAAAAAACCT CGATACTCTT ACCGACATAG ATCAAACCTT GCAGTCCTTA AATAAATCTC TCGGTTTTTA TGATCTGTTT ATTATTCGTG ATGATGGCAC CGTTTTATAT ACAGTTGAGA AAGAGTCTGA TTTCGGTACC AATTTGCGTA CAGGGCCCTT CCATGATTCT GGATTAGCAC AATTATTTAA TAAGGCATTG GGATCGGCGG GTACTGTATT GTTGCAAGAT TTTTCCGCAT ACGCGCCTTC AAATGGTCAA CCAGCGGCAT TTATTGGACA ATCCATTCAG TTTAATCAGC AAAGGTTAGT CGTGGCGGCT CAGGTATCTA TCGACCGCAT TAATCGAGTT ATGCAAATTC GTGAAGGTAT GGGGCAAAGC GGTGAAACTT ATCTCATAGG TCCAAATAAT CGTATGCGCT CCGATTCTTT TCTCGACCCA GTTAATCGCA CTGTTACGGC TTCTTTTGCG GGAACGGTAG CTCAGAATGG TGTCGATACA CAGGCGGTCA AAGAGGCGCT GGCAGGTAAA ACAGGGGTGA TGCAACTGAA TGATTACAAT AATAATCCTG TATTATCTGC TTATTCTCCC GTCGTTGAGC TTGGTTTACG TTGGGGTTTG ATGGCTGAAA TTGATGTGAG TGAAATTGCA GCTCCCGCCT ACCGCATGCT GTTTATTGGT TTATCTGTAT GTGTGGCCGC CTTAGTGTTG GCGTTCGCTG CTGCGAAGTT AGTCACAGGA TTTGTATTAA AGCCGCTCGG CGGTGAGCCT GAGGACATGT GCAACTTGAC CAGTATGATC GCCTCTGGTG ATTTAACTCA TCATTTACCG CATATTCAAA CGGATAATCA CCTGATGAGT TGGTTGGCGC GGATGCAAAC TAAGCTTAAA GAAATCATCA GTCAGCTGGT GGGTGTTGGG CATGAACTTG AATCCGCCGC CGAACAAAAC TCTGCAGCTA TGAGTCAAGC CGATTGCAGT ATTCAGATGC AGGCTAAAGA AACCGATATG TTGGCCACTG CAGTTGAAGA AATGAGTTAT GCCGCAGCCG AAATCAGCAC CAATACGATG AGGTCCTCCG ATGAAGTGTC TGCCTGTACC CATTCGAGTG AAATTCTTTC ACAAAACTTA GCCAGTACTC GTAAAAGCTT AAAAGTAACC TTGAACAGTT TTGCGACTAT TCATCAACAG GTGGGTAGTC TTGAGGCGGA TAGTCAGAAA ATCGGTTCAG TATTGGCGGT GATAAATGCG ATTGCAGAAC AAACTAATCT CTTGTCTCTT AATGCGGCGA TTGAAGCTGC GAGAGCTGGC GAGCATGGTC GTGGATTTGC GGTGGTGGCC GATGAGGTGC GTCAGTTAGC GGTGAAGGTT CAGTTGGCAA CTCAGGATAT TGGGCAAGTG TTAAAAGGTA TTCAGCAACA GTCAGGTGTG CTGGCGTTGC ATAGCGTAAC GTGTTCCACT GAAGCCTCTA AAACCGCAGA AGATGCCGAT GGAATGCAAG CGGCTGTGGA TGATATTGCT TTGCGCTTAG AAACCTTAAA GGCATTAATG ATTCAAACCG CAACCGCTGC GGAAGAACAA ACAACGGTTT CAGCGACAAT TGCGCAGGGG ATTGCTGGCT TAAGCGTGGC GGCGGAGGAA AATAGTGCGG CTATCAGCCA AGTGGCAGCG AGTACGCGGA GTCTGTTGGG GTTAGCAAAT CAGCTTGGTT TAACAACGGC ACAGTTTAAG GTGTAG
|
Protein sequence | MGFTRKIQLI SLLIVLLPLI FATAIVTYIA RDELFAEAQS RLVAVREIKQ RQIVSMFQDF SDNLQAVSAV IASQKNLDTL TDIDQTLQSL NKSLGFYDLF IIRDDGTVLY TVEKESDFGT NLRTGPFHDS GLAQLFNKAL GSAGTVLLQD FSAYAPSNGQ PAAFIGQSIQ FNQQRLVVAA QVSIDRINRV MQIREGMGQS GETYLIGPNN RMRSDSFLDP VNRTVTASFA GTVAQNGVDT QAVKEALAGK TGVMQLNDYN NNPVLSAYSP VVELGLRWGL MAEIDVSEIA APAYRMLFIG LSVCVAALVL AFAAAKLVTG FVLKPLGGEP EDMCNLTSMI ASGDLTHHLP HIQTDNHLMS WLARMQTKLK EIISQLVGVG HELESAAEQN SAAMSQADCS IQMQAKETDM LATAVEEMSY AAAEISTNTM RSSDEVSACT HSSEILSQNL ASTRKSLKVT LNSFATIHQQ VGSLEADSQK IGSVLAVINA IAEQTNLLSL NAAIEAARAG EHGRGFAVVA DEVRQLAVKV QLATQDIGQV LKGIQQQSGV LALHSVTCST EASKTAEDAD GMQAAVDDIA LRLETLKALM IQTATAAEEQ TTVSATIAQG IAGLSVAAEE NSAAISQVAA STRSLLGLAN QLGLTTAQFK V
|
| |