Gene Sputcn32_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0380 
Symbol 
ID5081314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp411424 
End bp413379 
Gene Length1956 bp 
Protein Length651 aa 
Translation table11 
GC content46% 
IMG OID640497500 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001181911 
Protein GI146291487 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTTA CTCGTAAAAT TCAGCTTATC AGTTTATTAA TTGTCCTATT ACCCCTCATT 
TTTGCTACAG CAATAGTAAC TTATATTGCT CGGGATGAAT TGTTTGCCGA GGCTCAGTCT
CGTTTAGTGG CTGTGCGTGA GATCAAGCAG CGGCAAATTG TGAGTATGTT TCAGGACTTT
TCCGATAATC TTCAGGCCGT CAGCGCCGTA ATCGCCAGCC AAAAAAACCT CGATACTCTT
ACCGACATAG ATCAAACCTT GCAGTCCTTA AATAAATCTC TCGGTTTTTA TGATCTGTTT
ATTATTCGTG ATGATGGCAC CGTTTTATAT ACAGTTGAGA AAGAGTCTGA TTTCGGTACC
AATTTGCGTA CAGGGCCCTT CCATGATTCT GGATTAGCAC AATTATTTAA TAAGGCATTG
GGATCGGCGG GTACTGTATT GTTGCAAGAT TTTTCCGCAT ACGCGCCTTC AAATGGTCAA
CCAGCGGCAT TTATTGGACA ATCCATTCAG TTTAATCAGC AAAGGTTAGT CGTGGCGGCT
CAGGTATCTA TCGACCGCAT TAATCGAGTT ATGCAAATTC GTGAAGGTAT GGGGCAAAGC
GGTGAAACTT ATCTCATAGG TCCAAATAAT CGTATGCGCT CCGATTCTTT TCTCGACCCA
GTTAATCGCA CTGTTACGGC TTCTTTTGCG GGAACGGTAG CTCAGAATGG TGTCGATACA
CAGGCGGTCA AAGAGGCGCT GGCAGGTAAA ACAGGGGTGA TGCAACTGAA TGATTACAAT
AATAATCCTG TATTATCTGC TTATTCTCCC GTCGTTGAGC TTGGTTTACG TTGGGGTTTG
ATGGCTGAAA TTGATGTGAG TGAAATTGCA GCTCCCGCCT ACCGCATGCT GTTTATTGGT
TTATCTGTAT GTGTGGCCGC CTTAGTGTTG GCGTTCGCTG CTGCGAAGTT AGTCACAGGA
TTTGTATTAA AGCCGCTCGG CGGTGAGCCT GAGGACATGT GCAACTTGAC CAGTATGATC
GCCTCTGGTG ATTTAACTCA TCATTTACCG CATATTCAAA CGGATAATCA CCTGATGAGT
TGGTTGGCGC GGATGCAAAC TAAGCTTAAA GAAATCATCA GTCAGCTGGT GGGTGTTGGG
CATGAACTTG AATCCGCCGC CGAACAAAAC TCTGCAGCTA TGAGTCAAGC CGATTGCAGT
ATTCAGATGC AGGCTAAAGA AACCGATATG TTGGCCACTG CAGTTGAAGA AATGAGTTAT
GCCGCAGCCG AAATCAGCAC CAATACGATG AGGTCCTCCG ATGAAGTGTC TGCCTGTACC
CATTCGAGTG AAATTCTTTC ACAAAACTTA GCCAGTACTC GTAAAAGCTT AAAAGTAACC
TTGAACAGTT TTGCGACTAT TCATCAACAG GTGGGTAGTC TTGAGGCGGA TAGTCAGAAA
ATCGGTTCAG TATTGGCGGT GATAAATGCG ATTGCAGAAC AAACTAATCT CTTGTCTCTT
AATGCGGCGA TTGAAGCTGC GAGAGCTGGC GAGCATGGTC GTGGATTTGC GGTGGTGGCC
GATGAGGTGC GTCAGTTAGC GGTGAAGGTT CAGTTGGCAA CTCAGGATAT TGGGCAAGTG
TTAAAAGGTA TTCAGCAACA GTCAGGTGTG CTGGCGTTGC ATAGCGTAAC GTGTTCCACT
GAAGCCTCTA AAACCGCAGA AGATGCCGAT GGAATGCAAG CGGCTGTGGA TGATATTGCT
TTGCGCTTAG AAACCTTAAA GGCATTAATG ATTCAAACCG CAACCGCTGC GGAAGAACAA
ACAACGGTTT CAGCGACAAT TGCGCAGGGG ATTGCTGGCT TAAGCGTGGC GGCGGAGGAA
AATAGTGCGG CTATCAGCCA AGTGGCAGCG AGTACGCGGA GTCTGTTGGG GTTAGCAAAT
CAGCTTGGTT TAACAACGGC ACAGTTTAAG GTGTAG
 
Protein sequence
MGFTRKIQLI SLLIVLLPLI FATAIVTYIA RDELFAEAQS RLVAVREIKQ RQIVSMFQDF 
SDNLQAVSAV IASQKNLDTL TDIDQTLQSL NKSLGFYDLF IIRDDGTVLY TVEKESDFGT
NLRTGPFHDS GLAQLFNKAL GSAGTVLLQD FSAYAPSNGQ PAAFIGQSIQ FNQQRLVVAA
QVSIDRINRV MQIREGMGQS GETYLIGPNN RMRSDSFLDP VNRTVTASFA GTVAQNGVDT
QAVKEALAGK TGVMQLNDYN NNPVLSAYSP VVELGLRWGL MAEIDVSEIA APAYRMLFIG
LSVCVAALVL AFAAAKLVTG FVLKPLGGEP EDMCNLTSMI ASGDLTHHLP HIQTDNHLMS
WLARMQTKLK EIISQLVGVG HELESAAEQN SAAMSQADCS IQMQAKETDM LATAVEEMSY
AAAEISTNTM RSSDEVSACT HSSEILSQNL ASTRKSLKVT LNSFATIHQQ VGSLEADSQK
IGSVLAVINA IAEQTNLLSL NAAIEAARAG EHGRGFAVVA DEVRQLAVKV QLATQDIGQV
LKGIQQQSGV LALHSVTCST EASKTAEDAD GMQAAVDDIA LRLETLKALM IQTATAAEEQ
TTVSATIAQG IAGLSVAAEE NSAAISQVAA STRSLLGLAN QLGLTTAQFK V