Gene Rsph17029_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1839 
Symbol 
ID4896465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1937182 
End bp1939245 
Gene Length2064 bp 
Protein Length687 aa 
Translation table11 
GC content70% 
IMG OID640112433 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001043717 
Protein GI126462603 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCTC TGGTCTGGAT TTTCCGGTTT CGCGTCAAGA TCACGCTGGC GCTGCTGCTG 
GCGGGGCTTC TGCCGGCCGC GGCCATCCTG ACGCTCGATA CTTCGCGCCT CCGGGAGGCC
GCGCAGGCTT CGGTCGAGGC GGAGCTCGAA CTCGCCGCCG ACATGAAGGA GGCACAGATC
CAGACGTGGT TCGCCACGCT GGTGCGTATC GTGCAAAGCC TCGCCGACAA TCCCGCCACG
CTTGCAGCCC TCGACGAGTT CGCCCGTGGC CGGGCCGGGC TTCTGGCCGA TCCCGCCTTC
CGGGTCGACG AGGCGCGACT GACCGAGCGG TACGACCTGC AGTTGCAGGC GACGCGCGGC
GCGGAGCCCG GGGCGCAGAA GGAATGGATG GCGCTCGACG AGGGGGCGCG GCGGCTCCAG
CATCTCTATG TTTCGGCCAA CCCGAAGCCC GTGGGCGAGA AGCACCGGCT CGATGATGCC
GGCGACGGCA GCGCCTATTC GGCCGCCCAC CGCCGGCATC ATCCGTTCCT GCGCGGCTAT
CTCGAACGCT TCGGCTTGTA CGACCTGTTT CTGATCGAGC CCGAGAACGG CACCATCCTC
TATACGGTCT TCAAGGAGAC CGATTTCGGC ACCTCGCTCT TTTCCGGCCC CTACCGCGAC
AGCGCCTTCG CCCGGACCGC GCAGAGGATG GCGAAGGAAG GCGGGCGCGA CCCGTTTCTG
ATCGCCGATT TCGAGCCCTA TGCGCCCTCC TACAACGCGC ATGCGGGCTT CATCCTGCTG
CCGTTGCAGA AGGATGGCAC CCTTGTCGGC ATCCTCGCCT TCCAGATCCC GATCGAGCCT
CTGAACGAGA TCATGCGCCG CAAGCTCGGC CGGTTCGAGA CGTCGGACGG CTATCTGGTG
GGGGCGGACG GGCGCCTTCG CTCGGTGCCG CGGCGGGCGG CCGACATCGA GGTCGGGACG
CCGGTGGCGG GGCCGGTGGC CGCGGCCGCA CGGGCCGGCA AGGCGGAAAG CCTCGAAGGC
GCGAATTACG GCGGCGAGCC GATGGTGGCC GCGGTACGGC CCGCCCGGAT CGGCGGGATG
ACCTGGGGGA TGGTGTCCGA GATCACGGCC GAGGAAGCCT TCGCCGAGGC GCGCGCGGCA
CTTCGGACGG CGAGGGTGAC GGCGGCGGCT TTGGCGGGGT TGATCCTGAT CGCGGGGCTT
CTGCTGTCGG CCTGGCTGAT CCGGCCGATC CGGCGGCTGT CGCGCCACAT CGAGGAGGAG
GCCGGCCGTG CGGTCGAAGC CCTGGGAACC GCCTCGACGC GGGTGGCAAC GGCGGCCGGG
AAGATGGTGG TGACCGCCGA GGAAGCCGGC CGGCAGAGCC GGGAGGTGCG GGAGAACTCG
CGGCTTGCCG CCACCAATGT CGCGACCGTT GCCTCGGCGG CCGAGGAGAT GTCGGCCTCG
GCGCAGGAGG TGGTGCAGGG TGTGGTTCGC ACCAGCCGCC TGATCGAGGA GACGACCGCG
CGAACCGGCG CGGCGCAGAC CTCGCTCGAG GCCTTGGAGA GCGCCACCGG CCGCATCCGG
GGCGTGGTCT CCTTCATCGA GGGGATCGCG CGAAAGACCG ACCTTCTGGC ATTGAATGCC
GCGGTCGAGG CGGCACGGGC AGGCGAGGCG GGCCGCGGCT TCGCGGTGGT GGCCGAGGAG
GTGCGCAAGC TTGCCGCGCT GACCACCAGT TCCACCGGCG AGATCGCCGC CGAGGTGGGG
GCGGTGACGG GCGCGGTCGA GGCCAATGGC GCGGCCGTGC GCGGCATCGT CGAGGCGGTC
GGGCAGGTGC AGGCGCAGGC GCGGCTGATT TCCGTCGCGG CCGGGCAGCA GGGCGCCGTC
GCGGCCGAAA TCGCCTCGCG CATGGCCGAC ACCGCAGAGC GCGTGGCCCG CGTCGATCAC
GGAATTGCCG GCGTCGAAGA GGCCTCGACC GATGCGGCCG CCACCGCAAA GGGGCTGACG
GCCGAGATGG AGACGATGGA CACCGCCGCA ACCGCCATGG GCGCGGCCGT GACCGACTTC
GCCGTGATGG TCAGAGACCT CTGA
 
Protein sequence
MRALVWIFRF RVKITLALLL AGLLPAAAIL TLDTSRLREA AQASVEAELE LAADMKEAQI 
QTWFATLVRI VQSLADNPAT LAALDEFARG RAGLLADPAF RVDEARLTER YDLQLQATRG
AEPGAQKEWM ALDEGARRLQ HLYVSANPKP VGEKHRLDDA GDGSAYSAAH RRHHPFLRGY
LERFGLYDLF LIEPENGTIL YTVFKETDFG TSLFSGPYRD SAFARTAQRM AKEGGRDPFL
IADFEPYAPS YNAHAGFILL PLQKDGTLVG ILAFQIPIEP LNEIMRRKLG RFETSDGYLV
GADGRLRSVP RRAADIEVGT PVAGPVAAAA RAGKAESLEG ANYGGEPMVA AVRPARIGGM
TWGMVSEITA EEAFAEARAA LRTARVTAAA LAGLILIAGL LLSAWLIRPI RRLSRHIEEE
AGRAVEALGT ASTRVATAAG KMVVTAEEAG RQSREVRENS RLAATNVATV ASAAEEMSAS
AQEVVQGVVR TSRLIEETTA RTGAAQTSLE ALESATGRIR GVVSFIEGIA RKTDLLALNA
AVEAARAGEA GRGFAVVAEE VRKLAALTTS STGEIAAEVG AVTGAVEANG AAVRGIVEAV
GQVQAQARLI SVAAGQQGAV AAEIASRMAD TAERVARVDH GIAGVEEAST DAAATAKGLT
AEMETMDTAA TAMGAAVTDF AVMVRDL