| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0030 |
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| Symbol | |
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| ID | 4602287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 31147 |
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| End bp | 33129 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639779339 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_925912 |
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| Protein GI | 119773172 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.136855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0162002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTTA AAAAGGGGAT TTGGTATGGG CTGCTGTGCA TCGGCTTGTT GCCGCTGGTC
ATTGCGGGGG TTGTATCGGA ACAGCTTGCC GAGCGGGCAT TGAAAGCCCA GGTATATAAC
AAGTTGGAAG CTGTCAGGCA GCTGAAGGAA AACCAGCTGA CAGAGTACTT TGCCGATAAC
AGAGCCGATC TTAAGATGCT GGCTGCCGCC ATGGTGGATA TGGTGAGCTT CAGTGATGGC
TCGTCTTTGA AAACTATTAC CCATGCACAC GAGGACTACT TCACCCAGCT GGTGAAAGAG
TATGGTTACT ATGATGTGTT TGTCATAGAC CCGGATGGTG ACCTGGCATA CAGCTACGCA
AAGGAAGCCG ACTATGGTTC AAATCTTATC TCCGGGCCAT TTAAAGAGAC AAACCTCGCG
GATCTATTCA GAAGTGTATT ATCAAGCCAA CAGATTGAAA TGGTTGATTT TATGCCTTAC
ACGCCCAGCG GGGGCAAACC GGCAGCTTTC ATCGGGATGC CGGTTGTTTA TCATGGCCAA
CTATTAGCCG TGGTAGCGCT TCAGCTGTCG ATTGATCGTA TAAATCAGCT AATGAGTCAA
AGAGCGGGAA TGGGGGAAAC GGGAGAAAGT TATCTGGTCG GTAACGACTA TCGCATGCGT
TCTAACTCGT TTCTGGACCC CATAAGACGC TCAGTGATTG CCAGCTTTAG CGGTTCTGTG
GATGAAAACG GCATCAACAC AGTCGCATCC AGAAAGGCGC TCAACGGTGA AAGTGGCATG
GAAGTCATAA CCGACTACCA GGATAATTTA GTCCTGTCAG CGTTCAGGCC AATCAGTCCC
GATTTTGCAG GTAAAATTCG CTGGGCTCTG ATTGTGGAAA TCGATGAGGC AGAAGCGCTG
GAATCTGTTG TGGCTATTAA AAATAGCCTG TGGATAGTAT TGGGGATTTC TGTGTTGGTG
GTGGTTGGTT TTGCACGACT GATCCTGCGT TCGGTATTAC GTCCTTTAGG GGGCGAGCCG
GCTGTTATGC AGCACATTTC AGAGCGAGTG GCAGGCGGTG ATTTGGCCAT TGATTTTTGC
CAGTCCGAAA AGACAGGTGT TTATCTTGCC ATGGAAACCA TGTCCCACAA TCTGAGAGAA
TTGGTCTCAC GGATTGTAGG TATCACCGAG CAGCTTTCTG CCGCATCGGA GCAAACCCGC
GTTGCAAGTG AAGAAACCAA TCAAAGCTTG TTCCAACAAC AAGCTAATAT TGAACGGGTT
TCGGCGTCTA TAAATGAGAT GACGGCGACT ATCGCTGACG TGGCCCACAA TGCGCGTCAG
GTCGCTGACT CGACTCAGGC GGCCTACGGT TTGTCGCAAA TCGCCGATAA ACAGGTGCGC
AGCAACATAG GCACAATCAA CGGCCTGGCA TCGGCGATTA CCGAGGCAAC CAATGTCATT
CGCAGTGTTG AATTGCAAAG TCAGGGGATA AGCAAGGTGC TGGAGGTGAT CCGTGGCATT
GCAGACCAAA CCAATTTGCT CGCCCTTAAC GCTGCAATTG AGGCTGCCCG CGCAGGAGAA
CAGGGGCGTG GTTTTGCCGT TGTTGCAGAT GAGGTACGGC AGCTGGCTCA AAAGACAGCA
CAATCGACCC GTGACATTGA AGAGATGATT GCTTTGTTGC AGCAGGGCAC ACAAAACGCC
GTTGGGGTAA TGGGGGAAAG TACAGTGCAT CTTCAGCAAA CTGTCGACAG CGCCGAATGT
ACCGCCGAAG CCATTCGTAA CACGCACATA GAGATAGAAT CTATCGCAGC CAATGCTGAA
CAAATTGCCA CGGCGGCCTC TCAGCAAACC CTGGCCGCAG AGGAAATCAG TCAAAGTCTG
GCCGTAATAA GCGATGCCGC ATCTGTGAAT GCGGCCAGCT CTGAGCAGAC AGCCGTGGCC
TCAACGCAAC TCAGCGAGCT TGCCTTGGAT TTAAAGAGCA TTACTGGCCG CTTTAACATC
TGA
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| Protein sequence | MSFKKGIWYG LLCIGLLPLV IAGVVSEQLA ERALKAQVYN KLEAVRQLKE NQLTEYFADN
RADLKMLAAA MVDMVSFSDG SSLKTITHAH EDYFTQLVKE YGYYDVFVID PDGDLAYSYA
KEADYGSNLI SGPFKETNLA DLFRSVLSSQ QIEMVDFMPY TPSGGKPAAF IGMPVVYHGQ
LLAVVALQLS IDRINQLMSQ RAGMGETGES YLVGNDYRMR SNSFLDPIRR SVIASFSGSV
DENGINTVAS RKALNGESGM EVITDYQDNL VLSAFRPISP DFAGKIRWAL IVEIDEAEAL
ESVVAIKNSL WIVLGISVLV VVGFARLILR SVLRPLGGEP AVMQHISERV AGGDLAIDFC
QSEKTGVYLA METMSHNLRE LVSRIVGITE QLSAASEQTR VASEETNQSL FQQQANIERV
SASINEMTAT IADVAHNARQ VADSTQAAYG LSQIADKQVR SNIGTINGLA SAITEATNVI
RSVELQSQGI SKVLEVIRGI ADQTNLLALN AAIEAARAGE QGRGFAVVAD EVRQLAQKTA
QSTRDIEEMI ALLQQGTQNA VGVMGESTVH LQQTVDSAEC TAEAIRNTHI EIESIAANAE
QIATAASQQT LAAEEISQSL AVISDAASVN AASSEQTAVA STQLSELALD LKSITGRFNI
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