More than 300 homologs were found in PanDaTox collection
for query gene Swoo_0559 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_0559  methyl-accepting chemotaxis sensory transducer  100 
 
 
773 aa  1579    Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3576  methyl-accepting chemotaxis sensory transducer  41 
 
 
772 aa  561  1e-158  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0207298 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  37.58 
 
 
773 aa  520  1e-146  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_009456  VC0395_0185  methyl-accepting chemotaxis protein  37.47 
 
 
770 aa  480  1e-134  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1547  adenylate/guanylate cyclase with integral membrane sensor  35.91 
 
 
758 aa  322  9.999999999999999e-87  Cyanothece sp. PCC 7425  Bacteria  normal  0.592629  normal 
 
 
-
 
NC_008751  Dvul_0230  methyl-accepting chemotaxis sensory transducer  29.78 
 
 
963 aa  303  7.000000000000001e-81  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3112  putative methyl-accepting chemotaxis sensory transducer  35.01 
 
 
1029 aa  294  4e-78  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0030  putative methyl-accepting chemotaxis sensory transducer  32.69 
 
 
660 aa  280  7e-74  Shewanella amazonensis SB2B  Bacteria  normal  0.136855  normal  0.0162002 
 
 
-
 
NC_011769  DvMF_1698  methyl-accepting chemotaxis sensory transducer  31.06 
 
 
963 aa  266  8.999999999999999e-70  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_003910  CPS_3925  methyl-accepting chemotaxis protein  30.46 
 
 
674 aa  257  7e-67  Colwellia psychrerythraea 34H  Bacteria  normal  0.903723  n/a   
 
 
-
 
NC_009831  Ssed_1002  methyl-accepting chemotaxis protein-like protein  32.22 
 
 
1100 aa  254  3e-66  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
637 aa  248  3e-64  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009431  Rsph17025_4286  hypothetical protein  30.39 
 
 
687 aa  247  6e-64  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0458  methyl-accepting chemotaxis sensory transducer  30.94 
 
 
726 aa  241  2.9999999999999997e-62  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.386076  n/a   
 
 
-
 
NC_008577  Shewana3_0264  methyl-accepting chemotaxis sensory transducer  32.89 
 
 
651 aa  241  2.9999999999999997e-62  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.00000238421 
 
 
-
 
NC_009438  Sputcn32_0380  methyl-accepting chemotaxis sensory transducer  31.96 
 
 
651 aa  240  8e-62  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0274  methyl-accepting chemotaxis sensory transducer  31.96 
 
 
651 aa  238  3e-61  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0270  methyl-accepting chemotaxis sensory transducer  31.96 
 
 
651 aa  238  3e-61  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0266  methyl-accepting chemotaxis sensory transducer  31.96 
 
 
651 aa  238  3e-61  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0274  methyl-accepting chemotaxis sensory transducer  31.96 
 
 
651 aa  238  3e-61  Shewanella baltica OS155  Bacteria  normal  0.292308  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  41.96 
 
 
637 aa  235  2.0000000000000002e-60  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_008322  Shewmr7_3758  methyl-accepting chemotaxis sensory transducer  32.55 
 
 
651 aa  233  1e-59  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  41.52 
 
 
636 aa  231  4e-59  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  36.78 
 
 
638 aa  229  2e-58  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  38.69 
 
 
716 aa  227  5.0000000000000005e-58  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  39.23 
 
 
640 aa  227  8e-58  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  37.18 
 
 
712 aa  224  4.9999999999999996e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  37.18 
 
 
712 aa  223  8e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_004347  SO_4466  methyl-accepting chemotaxis protein  30.51 
 
 
651 aa  223  9.999999999999999e-57  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  35.52 
 
 
541 aa  223  9.999999999999999e-57  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  35.9 
 
 
541 aa  222  1.9999999999999999e-56  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  37.18 
 
 
713 aa  220  7e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  38.83 
 
 
629 aa  220  1e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  38.42 
 
 
647 aa  219  2e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
640 aa  216  9.999999999999999e-55  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  37.9 
 
 
548 aa  216  9.999999999999999e-55  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  37.71 
 
 
642 aa  215  1.9999999999999998e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  38.27 
 
 
640 aa  216  1.9999999999999998e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
568 aa  214  4.9999999999999996e-54  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  37.08 
 
 
540 aa  214  7e-54  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4653  methyl-accepting chemotaxis sensory transducer  41.69 
 
 
639 aa  213  7.999999999999999e-54  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  33.61 
 
 
541 aa  213  7.999999999999999e-54  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
552 aa  213  1e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  37.78 
 
 
634 aa  213  1e-53  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  39.49 
 
 
555 aa  212  2e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  37.11 
 
 
620 aa  212  2e-53  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  37.6 
 
 
639 aa  213  2e-53  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  34.11 
 
 
638 aa  211  3e-53  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0778  methyl-accepting chemotaxis sensory transducer  41.39 
 
 
639 aa  211  3e-53  Pseudomonas putida W619  Bacteria  normal  normal  0.66043 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  34.95 
 
 
638 aa  210  6e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  36.59 
 
 
642 aa  210  8e-53  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  38 
 
 
634 aa  209  1e-52  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12462  cyclase  31.12 
 
 
730 aa  209  1e-52  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  29.76 
 
 
714 aa  209  1e-52  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  38.17 
 
 
634 aa  209  2e-52  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  33.92 
 
 
647 aa  209  2e-52  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  29.63 
 
 
714 aa  208  4e-52  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  35.8 
 
 
549 aa  207  5e-52  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  34.17 
 
 
638 aa  207  5e-52  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  36.52 
 
 
620 aa  207  7e-52  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  36.75 
 
 
545 aa  206  9e-52  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  37.99 
 
 
638 aa  206  1e-51  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_002947  PP_4658  methyl-accepting chemotaxis sensory transducer  40.79 
 
 
639 aa  206  1e-51  Pseudomonas putida KT2440  Bacteria  normal  0.415489  normal 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  41.27 
 
 
572 aa  206  1e-51  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4520  methyl-accepting chemotaxis sensory transducer  40.79 
 
 
639 aa  206  1e-51  Pseudomonas putida F1  Bacteria  normal  normal  0.886367 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  38.03 
 
 
554 aa  205  2e-51  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  36.87 
 
 
633 aa  204  4e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  35.41 
 
 
739 aa  204  5e-51  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  36.26 
 
 
620 aa  204  6e-51  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  36.86 
 
 
638 aa  203  8e-51  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  37.46 
 
 
554 aa  203  9.999999999999999e-51  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009483  Gura_3063  methyl-accepting chemotaxis sensory transducer  33.48 
 
 
533 aa  202  9.999999999999999e-51  Geobacter uraniireducens Rf4  Bacteria  normal  0.378908  n/a   
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  32.64 
 
 
643 aa  203  9.999999999999999e-51  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_011663  Sbal223_2000  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.04 
 
 
545 aa  202  9.999999999999999e-51  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000194984 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  36.03 
 
 
619 aa  203  9.999999999999999e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  35.04 
 
 
545 aa  203  9.999999999999999e-51  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  34.44 
 
 
555 aa  202  1.9999999999999998e-50  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  36.78 
 
 
638 aa  202  1.9999999999999998e-50  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  35.05 
 
 
647 aa  202  1.9999999999999998e-50  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  39 
 
 
640 aa  202  1.9999999999999998e-50  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  36.16 
 
 
645 aa  202  1.9999999999999998e-50  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  37.57 
 
 
605 aa  202  1.9999999999999998e-50  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  37.21 
 
 
647 aa  202  1.9999999999999998e-50  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  37.75 
 
 
554 aa  202  1.9999999999999998e-50  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_2463  methyl-accepting chemotaxis sensory transducer  35.04 
 
 
545 aa  202  1.9999999999999998e-50  Shewanella baltica OS195  Bacteria  normal  0.0650014  normal  0.35347 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  35.07 
 
 
620 aa  202  1.9999999999999998e-50  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_009665  Shew185_2347  methyl-accepting chemotaxis sensory transducer  35.04 
 
 
545 aa  202  1.9999999999999998e-50  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  38.25 
 
 
554 aa  202  3e-50  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  36.47 
 
 
638 aa  201  3.9999999999999996e-50  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_012669  Bcav_0225  adenylate/guanylate cyclase with integral membrane sensor  27.94 
 
 
695 aa  201  3.9999999999999996e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.590775  normal  0.132241 
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  38.25 
 
 
554 aa  201  3.9999999999999996e-50  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  35.92 
 
 
634 aa  201  5e-50  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  38.94 
 
 
552 aa  201  6e-50  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  30.65 
 
 
636 aa  200  7.999999999999999e-50  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.95 
 
 
554 aa  200  9e-50  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  33.17 
 
 
638 aa  200  9e-50  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  37.95 
 
 
554 aa  200  9e-50  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1055  diguanylate cyclase  26.29 
 
 
598 aa  200  1.0000000000000001e-49  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  35.31 
 
 
628 aa  200  1.0000000000000001e-49  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  36.27 
 
 
558 aa  199  1.0000000000000001e-49  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
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