More than 300 homologs were found in PanDaTox collection
for query gene TM1040_1027 on replicon NC_008044
Organism: Ruegeria sp. TM1040



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008044  TM1040_1027  methyl-accepting chemotaxis sensory transducer  100 
 
 
795 aa  1609    Ruegeria sp. TM1040  Bacteria  normal  normal  0.551962 
 
 
-
 
NC_008043  TM1040_3209  methyl-accepting chemotaxis sensory transducer  40.84 
 
 
782 aa  499  1e-140  Ruegeria sp. TM1040  Bacteria  normal  0.684679  normal 
 
 
-
 
NC_008044  TM1040_2453  methyl-accepting chemotaxis sensory transducer  42.42 
 
 
788 aa  478  1e-133  Ruegeria sp. TM1040  Bacteria  normal  0.925334  normal  0.122382 
 
 
-
 
NC_008043  TM1040_3177  methyl-accepting chemotaxis sensory transducer  38.1 
 
 
749 aa  339  9.999999999999999e-92  Ruegeria sp. TM1040  Bacteria  normal  0.726311  normal 
 
 
-
 
NC_008044  TM1040_0433  methyl-accepting chemotaxis sensory transducer  33.64 
 
 
776 aa  335  2e-90  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0984  methyl-accepting chemotaxis sensory transducer  47.66 
 
 
608 aa  328  3e-88  Ruegeria sp. TM1040  Bacteria  normal  0.0666136  normal  0.983928 
 
 
-
 
NC_011989  Avi_4013  methyl-accepting chemotaxis protein  33.95 
 
 
756 aa  319  1e-85  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0051  methyl-accepting chemotaxis sensory transducer  38.4 
 
 
796 aa  318  3e-85  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.000000874578 
 
 
-
 
NC_010581  Bind_3620  methyl-accepting chemotaxis sensory transducer  45.62 
 
 
677 aa  317  4e-85  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0125911 
 
 
-
 
NC_008044  TM1040_0839  methyl-accepting chemotaxis sensory transducer  45.93 
 
 
927 aa  308  2.0000000000000002e-82  Ruegeria sp. TM1040  Bacteria  normal  0.587759  normal  0.752939 
 
 
-
 
NC_011369  Rleg2_3216  methyl-accepting chemotaxis sensory transducer  33.24 
 
 
771 aa  308  2.0000000000000002e-82  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.556382 
 
 
-
 
NC_008044  TM1040_0359  methyl-accepting chemotaxis sensory transducer  47.45 
 
 
927 aa  308  3e-82  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1798  methyl-accepting chemotaxis sensory transducer  46.73 
 
 
615 aa  307  4.0000000000000004e-82  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.371991  normal 
 
 
-
 
NC_010338  Caul_0276  methyl-accepting chemotaxis sensory transducer  43.16 
 
 
657 aa  306  9.000000000000001e-82  Caulobacter sp. K31  Bacteria  normal  0.461968  normal  0.560518 
 
 
-
 
NC_012850  Rleg_3511  methyl-accepting chemotaxis sensory transducer  33.38 
 
 
771 aa  304  5.000000000000001e-81  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.595827 
 
 
-
 
NC_011369  Rleg2_0052  methyl-accepting chemotaxis sensory transducer  37.91 
 
 
778 aa  303  7.000000000000001e-81  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0947231 
 
 
-
 
NC_011365  Gdia_3445  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.31 
 
 
746 aa  303  9e-81  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.2502  normal 
 
 
-
 
NC_010338  Caul_0236  methyl-accepting chemotaxis sensory transducer  43.05 
 
 
660 aa  301  4e-80  Caulobacter sp. K31  Bacteria  normal  0.105118  normal 
 
 
-
 
NC_012850  Rleg_0943  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.89 
 
 
793 aa  298  3e-79  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.27721  normal 
 
 
-
 
NC_008044  TM1040_1383  methyl-accepting chemotaxis sensory transducer  47.04 
 
 
705 aa  298  3e-79  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_2705  methyl-accepting chemotaxis sensory transducer  46.38 
 
 
509 aa  297  5e-79  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0988  methyl-accepting chemotaxis protein  37.43 
 
 
695 aa  296  1e-78  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_2002  methyl-accepting chemotaxis sensory transducer  52.09 
 
 
530 aa  295  2e-78  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1449  methyl-accepting chemotaxis sensory transducer  44.89 
 
 
647 aa  294  5e-78  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008043  TM1040_3194  methyl-accepting chemotaxis sensory transducer  46.58 
 
 
614 aa  293  8e-78  Ruegeria sp. TM1040  Bacteria  normal  0.311641  normal 
 
 
-
 
NC_009636  Smed_0489  methyl-accepting chemotaxis sensory transducer  37.32 
 
 
698 aa  291  2e-77  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.000832175  normal 
 
 
-
 
NC_007802  Jann_3360  methyl-accepting chemotaxis sensory transducer  43.72 
 
 
648 aa  291  3e-77  Jannaschia sp. CCS1  Bacteria  normal  0.59059  normal 
 
 
-
 
NC_010338  Caul_0222  methyl-accepting chemotaxis sensory transducer  53.42 
 
 
642 aa  286  1.0000000000000001e-75  Caulobacter sp. K31  Bacteria  normal  0.414219  normal  0.376796 
 
 
-
 
NC_010338  Caul_1355  methyl-accepting chemotaxis sensory transducer  52.7 
 
 
494 aa  284  5.000000000000001e-75  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_2177  methyl-accepting chemotaxis sensory transducer  45.26 
 
 
602 aa  283  1e-74  Caulobacter sp. K31  Bacteria  normal  0.180362  normal  0.483778 
 
 
-
 
NC_010338  Caul_4292  methyl-accepting chemotaxis sensory transducer  49.68 
 
 
535 aa  282  2e-74  Caulobacter sp. K31  Bacteria  normal  normal  0.432431 
 
 
-
 
NC_010335  Caul_5142  methyl-accepting chemotaxis sensory transducer  40.39 
 
 
599 aa  282  2e-74  Caulobacter sp. K31  Bacteria  normal  0.367406  normal  0.838811 
 
 
-
 
NC_011989  Avi_1208  methyl-accepting chemotaxis protein  44.36 
 
 
604 aa  281  5e-74  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0221  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.42 
 
 
785 aa  280  6e-74  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1200  methyl-accepting chemotaxis protein  34.21 
 
 
728 aa  280  1e-73  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0214  methyl-accepting chemotaxis sensory transducer  41.91 
 
 
663 aa  278  2e-73  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.287216 
 
 
-
 
NC_009484  Acry_2144  methyl-accepting chemotaxis sensory transducer  51.16 
 
 
556 aa  278  2e-73  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0185  methyl-accepting chemotaxis sensory transducer  42.37 
 
 
669 aa  278  2e-73  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1141  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.45 
 
 
501 aa  276  7e-73  Caulobacter sp. K31  Bacteria  normal  0.489477  hitchhiker  0.000166409 
 
 
-
 
NC_011989  Avi_1117  methyl-accepting chemotaxis protein  43.7 
 
 
657 aa  275  2.0000000000000002e-72  Agrobacterium vitis S4  Bacteria  normal  0.593573  n/a   
 
 
-
 
NC_011370  Rleg2_6126  methyl-accepting chemotaxis sensory transducer  41.16 
 
 
650 aa  273  9e-72  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.375381  normal  0.0878449 
 
 
-
 
NC_009636  Smed_2893  methyl-accepting chemotaxis sensory transducer  48.75 
 
 
589 aa  272  1e-71  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1201  methyl-accepting chemotaxis protein  34.22 
 
 
728 aa  272  2e-71  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0520  methyl-accepting chemotaxis sensory transducer  41.98 
 
 
636 aa  271  4e-71  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3921  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.84 
 
 
586 aa  270  7e-71  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3632  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.51 
 
 
592 aa  269  1e-70  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.377399 
 
 
-
 
NC_012850  Rleg_0401  methyl-accepting chemotaxis sensory transducer  41.35 
 
 
615 aa  268  2e-70  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.000192098 
 
 
-
 
NC_011984  Avi_9088  methyl-accepting chemotaxis protein  40.71 
 
 
761 aa  268  2.9999999999999995e-70  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5069  methyl-accepting chemotaxis sensory transducer  43.03 
 
 
714 aa  268  2.9999999999999995e-70  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.277036  normal 
 
 
-
 
NC_011989  Avi_3729  methyl-accepting chemotaxis protein  41.76 
 
 
644 aa  268  2.9999999999999995e-70  Agrobacterium vitis S4  Bacteria  normal  0.554142  n/a   
 
 
-
 
NC_011989  Avi_2608  methyl-accepting chemotaxis protein  40.22 
 
 
655 aa  267  5e-70  Agrobacterium vitis S4  Bacteria  normal  0.445883  n/a   
 
 
-
 
NC_009484  Acry_2590  methyl-accepting chemotaxis sensory transducer  54.05 
 
 
642 aa  267  5.999999999999999e-70  Acidiphilium cryptum JF-5  Bacteria  normal  0.156907  n/a   
 
 
-
 
NC_009636  Smed_1613  methyl-accepting chemotaxis sensory transducer  45.24 
 
 
603 aa  267  5.999999999999999e-70  Sinorhizobium medicae WSM419  Bacteria  normal  0.183078  normal  0.160096 
 
 
-
 
NC_011368  Rleg2_5354  methyl-accepting chemotaxis sensory transducer  43.28 
 
 
714 aa  267  5.999999999999999e-70  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.642158  normal  0.0994281 
 
 
-
 
NC_011988  Avi_5151  methyl-accepting chemotaxis protein  39.27 
 
 
776 aa  266  8e-70  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0110  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.83 
 
 
588 aa  266  1e-69  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.885184  normal  0.0508963 
 
 
-
 
NC_011369  Rleg2_0369  methyl-accepting chemotaxis sensory transducer  41.04 
 
 
615 aa  265  2e-69  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  hitchhiker  0.00881781 
 
 
-
 
NC_010338  Caul_2435  methyl-accepting chemotaxis sensory transducer  49.67 
 
 
507 aa  265  3e-69  Caulobacter sp. K31  Bacteria  normal  0.264745  normal  0.414024 
 
 
-
 
NC_011989  Avi_2927  methyl-accepting chemotaxis protein  42.57 
 
 
730 aa  265  3e-69  Agrobacterium vitis S4  Bacteria  normal  0.0257741  n/a   
 
 
-
 
NC_008043  TM1040_3179  methyl-accepting chemotaxis sensory transducer  53.59 
 
 
885 aa  264  6e-69  Ruegeria sp. TM1040  Bacteria  normal  normal  0.498273 
 
 
-
 
NC_011369  Rleg2_0626  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.82 
 
 
726 aa  263  8e-69  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5554  methyl-accepting chemotaxis protein  43.91 
 
 
653 aa  262  2e-68  Agrobacterium vitis S4  Bacteria  normal  0.0672502  n/a   
 
 
-
 
NC_009428  Rsph17025_1790  methyl-accepting chemotaxis sensory transducer  42.96 
 
 
694 aa  261  3e-68  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_5255  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.9 
 
 
585 aa  261  4e-68  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.700683  normal 
 
 
-
 
NC_009636  Smed_2051  methyl-accepting chemotaxis sensory transducer  44.88 
 
 
717 aa  261  4e-68  Sinorhizobium medicae WSM419  Bacteria  normal  0.245091  normal  0.347836 
 
 
-
 
NC_011989  Avi_1547  methyl-accepting chemotaxis protein  49.82 
 
 
635 aa  260  6e-68  Agrobacterium vitis S4  Bacteria  normal  0.0672502  n/a   
 
 
-
 
NC_011365  Gdia_2195  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.18 
 
 
577 aa  260  6e-68  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_012854  Rleg_6402  methyl-accepting chemotaxis sensory transducer  42.41 
 
 
688 aa  260  7e-68  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.579482  normal  0.320846 
 
 
-
 
NC_011989  Avi_0452  methyl-accepting chemotaxis protein  39.65 
 
 
622 aa  260  9e-68  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_0173  methyl-accepting chemotaxis sensory transducer  42.58 
 
 
545 aa  260  9e-68  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.074609 
 
 
-
 
NC_010338  Caul_3214  methyl-accepting chemotaxis sensory transducer  48.65 
 
 
532 aa  259  1e-67  Caulobacter sp. K31  Bacteria  normal  normal  0.409706 
 
 
-
 
NC_011989  Avi_2928  methyl-accepting chemotaxis protein  39.29 
 
 
792 aa  259  1e-67  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4524  methyl-accepting chemotaxis sensory transducer  42.93 
 
 
661 aa  259  1e-67  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.66296 
 
 
-
 
NC_011989  Avi_2791  methyl-accepting chemotaxis protein  47.02 
 
 
622 aa  259  1e-67  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0098  methyl-accepting chemotaxis sensory transducer  48.25 
 
 
665 aa  259  2e-67  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.713215  normal 
 
 
-
 
NC_009484  Acry_2387  methyl-accepting chemotaxis sensory transducer  46.13 
 
 
505 aa  258  3e-67  Acidiphilium cryptum JF-5  Bacteria  normal  0.0566767  n/a   
 
 
-
 
NC_009636  Smed_0305  methyl-accepting chemotaxis sensory transducer  40.44 
 
 
841 aa  257  6e-67  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5535  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.95 
 
 
591 aa  257  7e-67  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.435889 
 
 
-
 
NC_009456  VC0395_0185  methyl-accepting chemotaxis protein  27.44 
 
 
770 aa  257  7e-67  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0083  methyl-accepting chemotaxis sensory transducer  47.62 
 
 
665 aa  256  8e-67  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0972557  normal  0.565594 
 
 
-
 
NC_011989  Avi_2860  methyl-accepting chemotaxis protein  40.22 
 
 
668 aa  256  8e-67  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0606  methyl-accepting chemotaxis sensory transducer  43.63 
 
 
644 aa  256  9e-67  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.307243 
 
 
-
 
NC_011989  Avi_0994  methyl-accepting chemotaxis protein  42.01 
 
 
649 aa  256  1.0000000000000001e-66  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0400  methyl-accepting chemotaxis sensory transducer  39.71 
 
 
843 aa  256  1.0000000000000001e-66  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.00170819 
 
 
-
 
NC_011369  Rleg2_0368  methyl-accepting chemotaxis sensory transducer  39.9 
 
 
843 aa  256  1.0000000000000001e-66  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0662296 
 
 
-
 
NC_011989  Avi_3647  methyl-accepting chemotaxis protein  37.72 
 
 
680 aa  255  2.0000000000000002e-66  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0080  methyl-accepting chemotaxis sensory transducer  47.71 
 
 
510 aa  255  2.0000000000000002e-66  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_2775  methyl-accepting chemotaxis protein  49.83 
 
 
558 aa  255  2.0000000000000002e-66  Agrobacterium vitis S4  Bacteria  normal  0.536477  n/a   
 
 
-
 
NC_011989  Avi_0958  methyl-accepting chemotaxis protein  37.23 
 
 
610 aa  255  2.0000000000000002e-66  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4091  methyl-accepting chemotaxis protein  47.91 
 
 
592 aa  254  4.0000000000000004e-66  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2440  methyl accepting chemotaxis protein  53.69 
 
 
770 aa  254  6e-66  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0806  methyl-accepting chemotaxis protein  41.4 
 
 
842 aa  254  6e-66  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0476  methyl-accepting chemotaxis sensory transducer  39.84 
 
 
589 aa  253  1e-65  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3714  methyl-accepting chemotaxis protein  35.32 
 
 
679 aa  253  1e-65  Agrobacterium vitis S4  Bacteria  normal  0.0885803  n/a   
 
 
-
 
NC_012850  Rleg_2464  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.43 
 
 
605 aa  253  1e-65  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4113  methyl-accepting chemotaxis protein  36.3 
 
 
778 aa  253  1e-65  Agrobacterium vitis S4  Bacteria  normal  0.433818  n/a   
 
 
-
 
NC_011365  Gdia_1550  methyl-accepting chemotaxis sensory transducer  49.33 
 
 
531 aa  252  2e-65  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.483034  normal  0.19588 
 
 
-
 
NC_012850  Rleg_0580  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.95 
 
 
606 aa  252  2e-65  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.237889  normal 
 
 
-
 
NC_012848  Rleg_5092  methyl-accepting chemotaxis sensory transducer  45.7 
 
 
626 aa  251  3e-65  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.359668  normal  0.0114189 
 
 
-
 
NC_011368  Rleg2_5372  methyl-accepting chemotaxis sensory transducer  40.39 
 
 
627 aa  251  3e-65  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.756404 
 
 
-
 
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