Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2002 |
Symbol | |
ID | 4077459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2106428 |
End bp | 2108020 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638007317 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_613996 |
Protein GI | 99081842 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAGC TAAGAGAGCC GCACGCGGAC ACCTCAGCCA TTGATAGCCC TGCTCGCCCC ATTGCAAAGG CGGCGAACAA GCGACGAATT CAGCGGGTCA CCAGTTGGCT GCTGGTCCCC CTGCCTGCCG CGGCCGCGTA TTTTGTCAAC GGGCTCCCCC TCTGGTGGGC CTTTGCCGCG CTGAGCCTTG TGCTCGGTGC CATGGCCTGG GTCTCCCGCA AACTGCCGGA GTCGACGCGC GATTACCTGC TGAGTTTCTG CTTCATCGCC CACTGTATCT TGCTCACCGC CTCGCTCAGC GGTCACGCGT GGCAGCTTGA TACGCATATG ATGTTCTTTG CCGCCCTGGC CATCGTATCG ACCCTTTCAA GTCCGCGCGC GCTGATCTTT GCAACGGTTC TGATCGCGCT GCACCACATT TCATTCAGCG TCCTGATGCC CTCTCTCGTC TATCCGGGTG GCGGCATTGC CGAGAACCTG CAACGCACTG TGATGCATGC GGTGATCGTG CTTCTGGAAG CCGGTGTTCT GCTGCTCAGC ATGCTCAGGA GCCTTGCCGC CGACACGGAG CTGAAAACCC AGCAGAGCGC GGCCGAACAT CAGGCGCAAG CGGCAGAACG CGCCGAAGCC CTCGCGATGC AAAGCCACAA GAACGCCGAG CGCGTCGTCA GCATCGTCGG CGATCATCTG CGTGAACTCG CCGCCGGGCG GCTGGATTGC AAGATCGACA CCTCTTTCCC ACAGGAATAT GCGCAGCTTC AGGAGAGCTT CAATTCCACC GTCGATACGC TGAAAGGCAC CATCGAACAG GTCAAAGACG CCACCTATCG CCTCAGCAAA GGCGCGACGG ACATCGATCA GGCCTCTGAA AATCTCTCCA ACCGCACCGA AAGCCAGGCC GCGACGCTGG AGCAATCCGT GGCCGCCCTC GAAGAACTGA CCACTTCCGT CAAATCTTCG GCCGAAGGCG CGCTCAGCGT TCAGCGCACG ATGGATGATG CCCGCTCCGA AGCCGTAAGC AGCGGTGGCG TCGTGAAGGA TGCGGTCTCC GCCATGAGCG CGATCGAGGA CTCCTCCTCC CAGATTGCGC GCAACATCAG CGTGATCGAC GACATCGCCT TCCAGACCAA CCTGCTGGCG CTCAATGCCG GGGTCGAGGC CGCCCGTGCG GGCGAGGCCG GCAAAGGCTT TGCCGTGGTC GCCGCCGAGG TGCAGGCGCT TGCGCAGCGG TCGGCTGATG CCGCAACCGA GATCAAGAGC CTGATCTCGC AGAGTTCCCA GCACGTTGAT CACGGGGTTG ATCTGGTGGG TCAGGCTGGC GAGGCGATCG AGAAGATCGT TGAACGCGTC GAGCAGATCT CTGAACTTGT GTCGGGCATC GCCACCAGCG CGGCAGAGCA GTCTTCCGGG CTGGGCGAGA TCAACACCGG GATGAGCCAG CTGGATCAGG TGACCCAGCA GAATGCGGCC ATGGTGGAAC AGGTCAGCGC AGCCAGTCAT CTGCTGCATT CGGACTCAAA GCGGCTTGCA CAGTTGATGG CGCATTTCGA GACGGGCGCC GCCGACCAGA CCCAAAGCGC CGCTGCGGCC TGA
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Protein sequence | MQKLREPHAD TSAIDSPARP IAKAANKRRI QRVTSWLLVP LPAAAAYFVN GLPLWWAFAA LSLVLGAMAW VSRKLPESTR DYLLSFCFIA HCILLTASLS GHAWQLDTHM MFFAALAIVS TLSSPRALIF ATVLIALHHI SFSVLMPSLV YPGGGIAENL QRTVMHAVIV LLEAGVLLLS MLRSLAADTE LKTQQSAAEH QAQAAERAEA LAMQSHKNAE RVVSIVGDHL RELAAGRLDC KIDTSFPQEY AQLQESFNST VDTLKGTIEQ VKDATYRLSK GATDIDQASE NLSNRTESQA ATLEQSVAAL EELTTSVKSS AEGALSVQRT MDDARSEAVS SGGVVKDAVS AMSAIEDSSS QIARNISVID DIAFQTNLLA LNAGVEAARA GEAGKGFAVV AAEVQALAQR SADAATEIKS LISQSSQHVD HGVDLVGQAG EAIEKIVERV EQISELVSGI ATSAAEQSSG LGEINTGMSQ LDQVTQQNAA MVEQVSAASH LLHSDSKRLA QLMAHFETGA ADQTQSAAAA
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