Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0305 |
Symbol | |
ID | 5321137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 326610 |
End bp | 329135 |
Gene Length | 2526 bp |
Protein Length | 841 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789240 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001325999 |
Protein GI | 150395532 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCATCG ACAGGATACT CGCGCGCTTC AAGATTCAGA CGAAGGTTCT CTTCTTCATC CTTCCCTTCG TCATCAGCAT TTCAGCCGTC GGCATCACCG GCCTTTATGC CACGGGCCTT TTGCAGGGCC GTATGGAGAT CTCGAACAGC GTCCTGCAGA CGCTGAGCGG CTTCAAGGAC GTCTATGCGC AGATGAACAA CTTCCTGCAG CGGACGACCG ATGAAAGTCG CCGGATGCTC AAGGACGCAA TCGTCACGCA AAAGGAAGTG CTGGCCGAAG CCGCGACGCA GGTCGCCGAT GGAAATGGCA AGGACGAGCT CGCTGCTGCC ATCGCCGAGA CCAGCGACAT CGAGACGCGC ATCGACGGGC TGTGGACGCT CCATGAAGGC GAACAGAAGC TGCGGGCCGG GACAAGGGCC AATCTGGAGC GGCTTGCGGC CGAACAGGCG AAGATCAATG AGGAGGCGAA CCGGCTGCAA TACGCCGTGC GCAAGGACGA GAATGCAGCC AAGACGATGC TGCGCAACGC CGAAAAGCTC ATGCGCGCCA GCCGCTTCTA CGCAGAATTC GCGACGGAGG TGAGCGGGGC GGTAACGGTC GAGGAGAAGC TCAAGGTCAC AGAGGCCCGA TACCCGACCA TTGGCCGCAC GCAACGGGAT ATCTTCGTGC TCCTGCCGAA GGGCGAGAAA TCTCTTGCCG AAACCGTCAA CTCGGCTTCC GGGGCGATCG GCGCTCTCAT CAAGACGCCG CCCGGCCCCG AAACGCTCGC CGGTCTTTCG AAATATGTCG ACCGTTTCCG CACCGCGAGC TTTCGCCTGG AAGCAGCATC GGTCGGCAAG ATGCGCGAGG CGACGCAGAT TTTCAGCGAA CTCGACGGGA AGATCGCCGG GACTGAATCC GTGCTGACAG CGACACGCAG GCTCACGATA TCCCTGACCG ATATCCAGAT CGCCACCGCG GCCTTTCTCG GAGTGACGGA CGAGGAAAAT CGCAAGAAGC TCCTCGACAA ATTCCTCGCA GTCCAGTCCA ACCTGACAAC CTTGCGCGGC ATAGCCAGCG GCATGACCTT CTTCGATCAG ACCGAGGGCG TCCTCCTGCC GATCATCGAC GGGATGAAGA AAGACGGCCT GGCGCTCGTC GAGACAACCG CGAAGCGAAC TGCGGAATTC GAGGCTGCGG GAGCGGCGAT CAACAAGATC TGGAGCGATC TCACCGGTTT TGCCGAGCAG CAGAAGGTCG TCGCCGGTGC CGAGCGGGAG GAGGCGGATC AGATTTCCCT GGGGGCGACC ATTGCCGGCG TAGTCATTGC CCTTCTCGCG GGAATTGCGC TTACGATTAC GCTCAAGAAA CCCATTGGAC AGATAACGGC TGCCATGCGG CGCCTCGCGG ATGGTGCGCT CGATACTTCG ATCGATGGCG GCATGCGCCG CGACGAGATC GGCGACATGG CGCGTGCCCT CGGCGTCTTC AAGGAAAATG CACTCTCCAA GGTGCGCATC GAGGTGGAGA GTGCCCAGGA ACGTGCTCGC GCGGATGCCG AGCGCAACCG CAACGACGCA GAGAAGCGCG AACTCGACAG GCAGATCGAC CTTGCCGTCA ATGAACTCGC CGCCGGTCTG GGGCGCCTGG CACAGGGCGA CCTGTCGCGG CAGATCGAAG TGCCCTTCAA AGGCCGGCTC GAACAATTGC GGCTGGATTT CAATGGTTCG CTCGTTCGCC TTCAGGATAC GCTGGCGCAG ATCCGTGCCA ATGCCCAGTC TATCCAGAAA AGCGGCGCCA GCATGCACCG GTCCGCCGAC GCGCTGTCGA AGCGGACCGA GGCTCAGGCC GCTTCGCTGG AGGAGACGGC GGCGGCGGTC GACCAGATCA CCGTCACGGT GCGTTCTTCG GCGGAAAGGG CGCACGAGGC GAACCAGGCG GTGATCGAGA CCAAGCGGAG CGCCGACAGC TCGGCAACGG TCGTCACCAA CGCCGTTGCT GCTATGGGAC GCATCGAGGA TGCCTCGCGG CAGATTGAAC AGATCATCGA GGTGATCGAC GACATTGCCT TTCAGACCAA TCTTCTGGCG CTCAACGCAG GCATCGAAGC GGCTCGCGCC GGGGAAGCGG GCAAGGGCTT TGCCGTGGTG GCGCAGGAAG TGCGCGAACT CGCGCAGCGC TCGGCCGGGG CGGCGCGCGA AATCAAGGGG CTGATCGAGA AATCGACGAA AGAGGTGAGC TCCGGCTCAC GCCTCGTCAA CGAAACGGGC GCCGTGCTCG CCTCGATCAG CGCCGAGATC GTCACCGTAA GCCGGCATGT GGAGATGATT GCCACGGCGA GCCGCGACCA GGCGATAGCC CTGAACGAAG TCAATGGTTC GGTCAACCAG ATGGACCAGA TGACCCAGCA GAACGCCTCG ATGGTCGAGG AAGCGACTGC CACCAGCCTG GCGCTCGCGA ACCAGGCAGA TAGCTTGATG ACGCTGGTCG AACAGTTCCG TCTCGAGCCG GTGGTTGCAG CCGATCACGC TTATCGGGCG GCATAG
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Protein sequence | MFIDRILARF KIQTKVLFFI LPFVISISAV GITGLYATGL LQGRMEISNS VLQTLSGFKD VYAQMNNFLQ RTTDESRRML KDAIVTQKEV LAEAATQVAD GNGKDELAAA IAETSDIETR IDGLWTLHEG EQKLRAGTRA NLERLAAEQA KINEEANRLQ YAVRKDENAA KTMLRNAEKL MRASRFYAEF ATEVSGAVTV EEKLKVTEAR YPTIGRTQRD IFVLLPKGEK SLAETVNSAS GAIGALIKTP PGPETLAGLS KYVDRFRTAS FRLEAASVGK MREATQIFSE LDGKIAGTES VLTATRRLTI SLTDIQIATA AFLGVTDEEN RKKLLDKFLA VQSNLTTLRG IASGMTFFDQ TEGVLLPIID GMKKDGLALV ETTAKRTAEF EAAGAAINKI WSDLTGFAEQ QKVVAGAERE EADQISLGAT IAGVVIALLA GIALTITLKK PIGQITAAMR RLADGALDTS IDGGMRRDEI GDMARALGVF KENALSKVRI EVESAQERAR ADAERNRNDA EKRELDRQID LAVNELAAGL GRLAQGDLSR QIEVPFKGRL EQLRLDFNGS LVRLQDTLAQ IRANAQSIQK SGASMHRSAD ALSKRTEAQA ASLEETAAAV DQITVTVRSS AERAHEANQA VIETKRSADS SATVVTNAVA AMGRIEDASR QIEQIIEVID DIAFQTNLLA LNAGIEAARA GEAGKGFAVV AQEVRELAQR SAGAAREIKG LIEKSTKEVS SGSRLVNETG AVLASISAEI VTVSRHVEMI ATASRDQAIA LNEVNGSVNQ MDQMTQQNAS MVEEATATSL ALANQADSLM TLVEQFRLEP VVAADHAYRA A
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