Gene Avi_4013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4013 
SymbolmcpG 
ID7387344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3377786 
End bp3380056 
Gene Length2271 bp 
Protein Length756 aa 
Translation table11 
GC content60% 
IMG OID643652735 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_002550909 
Protein GI222149952 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGGTCACCA ATCTGCGGGC ATTTTCCAGC GTCGCCACGA CGGGTGAGGC TCTTTACAAG 
TTCAAGGCGG ACTGGCGCTA TCTGGGCGAA AAGCCGCGCG AAGCGCTGGT GGATCGCTAC
ATTACTCAGA ATCCCAATCC GGCCGGGCAG CGATTGCAGT TGGAGTCGGC CCGTATCGAT
ACCTATGACA GCAACCATGC CAAATTCCAT CCGCTGCTGC GCATGGCCTT GCAGCAATAC
GGCTATGCGG ATGTGTTCCT GATCGATCAG AAGGGCAATA TCGTCTATTC GGTGCAGAAA
AACGATGAAT ATGCCGGCAA TATCGCCGAT CCCACGCTGA AAGACGGTCC TTTGGCACAG
GCCTATGCCC AGGTCGCAAA GAGCGACGAC CGGCAATTCT ATGCGCTGTC CGATTTCACC
CTGTATGGTC CGTCGCGTCA GTCGGTGGCC TTCCTGTCGA CGCCGCTGTT CATGGGCGAC
ATCAAGATGG GCGTGCTGGT TGTTGCCATT CCCTCGGAAC GGCTGACCGC GATGTTTTCC
AACCGCACAG GGCTTGGCGA TACGGGTGAG ACCATTCTTC TCGATTCCAA TAGCGTGATG
GTCAATGATT CCGCGCTAAC AGGTGAAAAG GATTCTCTCG TCACCAAGGT TGCCGCACCG
ATGCTGGCCG ATGTTTTGAA GGGTGCCAAG GCGAGCGGTC AGATCGATGG CTATCGCAAT
ATGGTGAGCT ATGCGGCGGC CATTCCCCTG TCCTTTGCCG GGCACAACTG GGCTGTCGTT
GCGCTGATGA GCGAGAAAGA GGCACTGGCC AATGTCGCGC AGCTGCGCAA TATCGTGCTG
CTGATTGCCG CCGGTCTACT GGTTCTGGCG ATCACCGGCG CGGTTCTGTT TTCCCGCTCG
CTGACCGGGC CGATCAATCA ACTGGTCGAT AGCATGAAAC GGCTGGCCGA TGGTGATACC
GGCGTGACGC TTGTCGGTGA GAACCGGGCC GATGAAATCG GCGATATGGT ACGGTCCGTG
GCGATCTTCC GCGATGCGGC CATCGAGAAA ACACGGCTGC AATCCGCCGC CGAACAGGAT
CGGCAGACAT CGGAGGCCGA GCGTCTGGCC CGTGAAGCTG CCCGCAACGA GGAAACGGCC
CGGCTTCAGC AGGCCGTCGA TATTCTCGGC GCCGGTCTGC AACGGCTTGC TGCTGGCGAC
CTGACGACCA CTATCGAGAC GCCGTTCATG GAAGGCCTTG ACCGGCTGCG CACCGACTTC
AACGATTCGA TCCGGCGGTT GGCATCGACA GTACGCCAGC TGTCCGGCAG CACAGGTTCG
ATCAATGGCA CCGCGACCGG AATGGTGGCG GCAACACATG ACCTGTCGCG GCGCTCCGAA
CAGCAGGCAG CGGCCATTGA GCAGACATCC GCCGTGATCA ACCAGATCAT GGAGGCCATC
CGCACCTCCA CGGAGCGGGC CGAAAATGCG AGACGCATGG TGGCGGATGC CAAGACCTCG
ACCGAACGCT CAGGAGCAAT TGTCGGGTCT GCAATCGACG CCATGGGACG GATCGAAGAA
GCGTCGCTGG CGATTTCGCA GATCATCAAT GTGATCGATG AGATTGCCTT CCAGACCAAT
CTTCTGGCCT TGAACGCTGG CGTGGAAGCG GCCCGTGCGG GCGAAGCAGG CAAGGGCTTT
GCCGTTGTTG CCCAGGAAGT GCGTGAATTG GCGCAGCGTT CCGCTGGTGC AGCCAAGGAA
ATCAAGGAAC TGATCAGCAA GTCTGGCGAG GCGGTGAAAA GCGGTGTCGG GCTGGTGCGC
AATACCGGCG ACGCGCTGGG CGATATTGCC GGTCAGGTCG TGCATATCAA CGAGGAAATC
TCGTTCATCG CCACGGCTGT CGGCGAACAA TCGGAAAGCG TGCGGGAAAT TTCCACGGCG
ATCCGCCAGA TGGAGGAAAC GACCCAGCAG AATTCGCAGA TGGCAGACCG CACCAATTCC
GATATGTCGC GTCTGACCAG CGATGCCGCG GCGCTGTCCA ATCTGGTGTC GCAGTTCAGG
GTGATGGATG GTGAGATCGT TCCCAACCCG TCAGCCTCTT CCTATCGTCC TGCGGCTTCG
CAGCGGCCGC CTGCGCCCAA TGCCCGTCAG TCCGTCAGGC CAGCCGATCC GGCCAGCAGT
CGTCCTGCCG CTTCGCCTGC CCGCGCCTTG ATGGGCAAGC TGGCGGCTGG GTTGAAGACT
AGCGGTGGCA CACCCGCCCC AAGCGGTGGC AACAATTGGG AAGAGTTCTG A
 
Protein sequence
MVTNLRAFSS VATTGEALYK FKADWRYLGE KPREALVDRY ITQNPNPAGQ RLQLESARID 
TYDSNHAKFH PLLRMALQQY GYADVFLIDQ KGNIVYSVQK NDEYAGNIAD PTLKDGPLAQ
AYAQVAKSDD RQFYALSDFT LYGPSRQSVA FLSTPLFMGD IKMGVLVVAI PSERLTAMFS
NRTGLGDTGE TILLDSNSVM VNDSALTGEK DSLVTKVAAP MLADVLKGAK ASGQIDGYRN
MVSYAAAIPL SFAGHNWAVV ALMSEKEALA NVAQLRNIVL LIAAGLLVLA ITGAVLFSRS
LTGPINQLVD SMKRLADGDT GVTLVGENRA DEIGDMVRSV AIFRDAAIEK TRLQSAAEQD
RQTSEAERLA REAARNEETA RLQQAVDILG AGLQRLAAGD LTTTIETPFM EGLDRLRTDF
NDSIRRLAST VRQLSGSTGS INGTATGMVA ATHDLSRRSE QQAAAIEQTS AVINQIMEAI
RTSTERAENA RRMVADAKTS TERSGAIVGS AIDAMGRIEE ASLAISQIIN VIDEIAFQTN
LLALNAGVEA ARAGEAGKGF AVVAQEVREL AQRSAGAAKE IKELISKSGE AVKSGVGLVR
NTGDALGDIA GQVVHINEEI SFIATAVGEQ SESVREISTA IRQMEETTQQ NSQMADRTNS
DMSRLTSDAA ALSNLVSQFR VMDGEIVPNP SASSYRPAAS QRPPAPNARQ SVRPADPASS
RPAASPARAL MGKLAAGLKT SGGTPAPSGG NNWEEF