Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4013 |
Symbol | mcpG |
ID | 7387344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3377786 |
End bp | 3380056 |
Gene Length | 2271 bp |
Protein Length | 756 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643652735 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_002550909 |
Protein GI | 222149952 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CTGGTCACCA ATCTGCGGGC ATTTTCCAGC GTCGCCACGA CGGGTGAGGC TCTTTACAAG TTCAAGGCGG ACTGGCGCTA TCTGGGCGAA AAGCCGCGCG AAGCGCTGGT GGATCGCTAC ATTACTCAGA ATCCCAATCC GGCCGGGCAG CGATTGCAGT TGGAGTCGGC CCGTATCGAT ACCTATGACA GCAACCATGC CAAATTCCAT CCGCTGCTGC GCATGGCCTT GCAGCAATAC GGCTATGCGG ATGTGTTCCT GATCGATCAG AAGGGCAATA TCGTCTATTC GGTGCAGAAA AACGATGAAT ATGCCGGCAA TATCGCCGAT CCCACGCTGA AAGACGGTCC TTTGGCACAG GCCTATGCCC AGGTCGCAAA GAGCGACGAC CGGCAATTCT ATGCGCTGTC CGATTTCACC CTGTATGGTC CGTCGCGTCA GTCGGTGGCC TTCCTGTCGA CGCCGCTGTT CATGGGCGAC ATCAAGATGG GCGTGCTGGT TGTTGCCATT CCCTCGGAAC GGCTGACCGC GATGTTTTCC AACCGCACAG GGCTTGGCGA TACGGGTGAG ACCATTCTTC TCGATTCCAA TAGCGTGATG GTCAATGATT CCGCGCTAAC AGGTGAAAAG GATTCTCTCG TCACCAAGGT TGCCGCACCG ATGCTGGCCG ATGTTTTGAA GGGTGCCAAG GCGAGCGGTC AGATCGATGG CTATCGCAAT ATGGTGAGCT ATGCGGCGGC CATTCCCCTG TCCTTTGCCG GGCACAACTG GGCTGTCGTT GCGCTGATGA GCGAGAAAGA GGCACTGGCC AATGTCGCGC AGCTGCGCAA TATCGTGCTG CTGATTGCCG CCGGTCTACT GGTTCTGGCG ATCACCGGCG CGGTTCTGTT TTCCCGCTCG CTGACCGGGC CGATCAATCA ACTGGTCGAT AGCATGAAAC GGCTGGCCGA TGGTGATACC GGCGTGACGC TTGTCGGTGA GAACCGGGCC GATGAAATCG GCGATATGGT ACGGTCCGTG GCGATCTTCC GCGATGCGGC CATCGAGAAA ACACGGCTGC AATCCGCCGC CGAACAGGAT CGGCAGACAT CGGAGGCCGA GCGTCTGGCC CGTGAAGCTG CCCGCAACGA GGAAACGGCC CGGCTTCAGC AGGCCGTCGA TATTCTCGGC GCCGGTCTGC AACGGCTTGC TGCTGGCGAC CTGACGACCA CTATCGAGAC GCCGTTCATG GAAGGCCTTG ACCGGCTGCG CACCGACTTC AACGATTCGA TCCGGCGGTT GGCATCGACA GTACGCCAGC TGTCCGGCAG CACAGGTTCG ATCAATGGCA CCGCGACCGG AATGGTGGCG GCAACACATG ACCTGTCGCG GCGCTCCGAA CAGCAGGCAG CGGCCATTGA GCAGACATCC GCCGTGATCA ACCAGATCAT GGAGGCCATC CGCACCTCCA CGGAGCGGGC CGAAAATGCG AGACGCATGG TGGCGGATGC CAAGACCTCG ACCGAACGCT CAGGAGCAAT TGTCGGGTCT GCAATCGACG CCATGGGACG GATCGAAGAA GCGTCGCTGG CGATTTCGCA GATCATCAAT GTGATCGATG AGATTGCCTT CCAGACCAAT CTTCTGGCCT TGAACGCTGG CGTGGAAGCG GCCCGTGCGG GCGAAGCAGG CAAGGGCTTT GCCGTTGTTG CCCAGGAAGT GCGTGAATTG GCGCAGCGTT CCGCTGGTGC AGCCAAGGAA ATCAAGGAAC TGATCAGCAA GTCTGGCGAG GCGGTGAAAA GCGGTGTCGG GCTGGTGCGC AATACCGGCG ACGCGCTGGG CGATATTGCC GGTCAGGTCG TGCATATCAA CGAGGAAATC TCGTTCATCG CCACGGCTGT CGGCGAACAA TCGGAAAGCG TGCGGGAAAT TTCCACGGCG ATCCGCCAGA TGGAGGAAAC GACCCAGCAG AATTCGCAGA TGGCAGACCG CACCAATTCC GATATGTCGC GTCTGACCAG CGATGCCGCG GCGCTGTCCA ATCTGGTGTC GCAGTTCAGG GTGATGGATG GTGAGATCGT TCCCAACCCG TCAGCCTCTT CCTATCGTCC TGCGGCTTCG CAGCGGCCGC CTGCGCCCAA TGCCCGTCAG TCCGTCAGGC CAGCCGATCC GGCCAGCAGT CGTCCTGCCG CTTCGCCTGC CCGCGCCTTG ATGGGCAAGC TGGCGGCTGG GTTGAAGACT AGCGGTGGCA CACCCGCCCC AAGCGGTGGC AACAATTGGG AAGAGTTCTG A
|
Protein sequence | MVTNLRAFSS VATTGEALYK FKADWRYLGE KPREALVDRY ITQNPNPAGQ RLQLESARID TYDSNHAKFH PLLRMALQQY GYADVFLIDQ KGNIVYSVQK NDEYAGNIAD PTLKDGPLAQ AYAQVAKSDD RQFYALSDFT LYGPSRQSVA FLSTPLFMGD IKMGVLVVAI PSERLTAMFS NRTGLGDTGE TILLDSNSVM VNDSALTGEK DSLVTKVAAP MLADVLKGAK ASGQIDGYRN MVSYAAAIPL SFAGHNWAVV ALMSEKEALA NVAQLRNIVL LIAAGLLVLA ITGAVLFSRS LTGPINQLVD SMKRLADGDT GVTLVGENRA DEIGDMVRSV AIFRDAAIEK TRLQSAAEQD RQTSEAERLA REAARNEETA RLQQAVDILG AGLQRLAAGD LTTTIETPFM EGLDRLRTDF NDSIRRLAST VRQLSGSTGS INGTATGMVA ATHDLSRRSE QQAAAIEQTS AVINQIMEAI RTSTERAENA RRMVADAKTS TERSGAIVGS AIDAMGRIEE ASLAISQIIN VIDEIAFQTN LLALNAGVEA ARAGEAGKGF AVVAQEVREL AQRSAGAAKE IKELISKSGE AVKSGVGLVR NTGDALGDIA GQVVHINEEI SFIATAVGEQ SESVREISTA IRQMEETTQQ NSQMADRTNS DMSRLTSDAA ALSNLVSQFR VMDGEIVPNP SASSYRPAAS QRPPAPNARQ SVRPADPASS RPAASPARAL MGKLAAGLKT SGGTPAPSGG NNWEEF
|
| |