Gene Avi_2860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2860 
SymbolmcpG 
ID7385974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2379122 
End bp2381128 
Gene Length2007 bp 
Protein Length668 aa 
Translation table11 
GC content60% 
IMG OID643651883 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_002550068 
Protein GI222149111 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACG CAATTTCCGG CCGAGGCCTT TCCGTCGGCC AGCGTCTGAT GACCTTGGGC 
GGCGCTGCCA TCTGCGCCAT CGCGGCCATG CTGGCCGTCG GCTATTACAA GAGCAGCCAA
CTGGATCACT CGTTGAACCG GGCGATAGAA CTCAAGAACA AGCTCGAGAT CGTCAACGAA
TTGCGGCTTG CCAATGGTGA GATCACCCTT GCCGCAATGG ATACGATCAT TGACCGCGAG
GAAGGCAAAG TCCAGCCGGA CCGCCAGAGC ATTTTCGACA AGGCTGGCGT GGCGCTTGCC
AATGGGTCTG CCACCGTCAA GCAGGTCGCC GCAGATGTCG GACAGTCCGC AAATATAGCA
AGCTATGACA GCGATGTGCA GAAGCTCCGC CAGGAAGTCA CGGTAGAATT GAAGAAACTG
GTGGAAACCC AGGCTCCGGA AGAGGATTAT GCCCGGATTG ACGATGTCAT CGATGGCGCC
GGCGGCAAGC TGAGCGACAC GCTGGCCAAT CTTTCCTCCG CCGCAGGCAA ACTGGTGGAA
AGCCGCGTGG CTGCCGCGAC TGAGGCGTCC AGAAGCGCCA TCACCATGCA GATCACCATC
GGTTTGATTG CATTTTTCCT GGTTCTCGGA TTGCAGATCA TCCATGCCCG TTCGGTCGTC
AACGGCATCC GCAATGTCCG CACCAGCCTC AAGAATATTA TCGACGGCAA TTACGACAGC
GAGATCCTCG GTCTGGCGCG CGGCGATGAA ATCGGTGACA TTGCCCGATC AGCTGATATT
TTCCGTCAAG CCGTCATCGA CAAACGCACG CTGGAAGCCG AGGCTGAAGA CAGCCGAAAG
AGCCGCGAAA CCGAGATGCG CGAGAGCGAG GCCGCAGCGG CTGCCGAGCG CGACCGGATG
AAAGCCGCCG TCGATGCCTT GGGCAAGGGC CTGAACCGAC TGGCCGAGGG CGATTTGCAG
GCAGTGGTCG ATGAAGCTTT CCCGCAGGAA GTCGAACGCC TGCGCACGGA TTTCAACCTT
GTCACCACCC ATCTGCGCAA TGTCATGGGC GAGATCTCCA TCAATTCCAG TTCCATCCAG
GCCAATGCCA ATCAGATGCG CTCCGCCGCC GACGATCTGG CGCGCCGCAC CGAACAGCAG
GCCGCATCGC TGGAAGAAAC ATCGGCGGCA CTGGCTGAGA TTACCGAAAC GGTCCGCACC
AGCACGCAGC GCGCCGAAGA TGCCAGCCAC ATGGTCGATA ATGCCAAGAC CTATGCCGAA
CAGTCCGGTG CCGTCGTCTC CGATGCCATG GCGGCCATGG AGCGGATTGA AAGCGCCACC
GGCGAAATCG GCAAGATCAT CAACGTCGTT GACGAGATCG CCTTCCAGAC CAATCTTCTG
GCGTTGAATG CCGGCGTCGA AGCCGCCCGC GCCGGGGATG CCGGCAAAGG CTTTGCCGTG
GTTGCCCAGG AAGTGCGCGC CTTGGCCGGA CGCGCTGCGG AAGCCGCCCG CACCATCAAG
GATCTGGTCA CCAAATCAAG CGACGAAGTG CGCACCGGGG TCGAGCTTGT GACCGCCACC
GGCGAGGCTT TGCATAAAAT AGGCGAAGAT GTGCTCCGAA TTAACGATCA CGTTAAGTCG
ATTGTAACCT CGGCGCGCGA ACAATCAGTT GGCCTGAGTG AAATCAATTC CGCCGTCGGA
CAGATGGACC AGGTCACGCA GCAAAATGCC GCCATGGTCG AAGAAACCAA TGCGGCAAGT
CATACGCTTG CCAGCGATGC AGACAATCTT GGACAGCTCG TTGGGCAATT CAAGATCGGC
GGCGCGGGCG AGACGCGGCC AGGATCACAC CAGGCGCGAC CGACATCAAG CAGACCTGAG
CCGGCAAGAC CGACCTCAGC ACCGACGCAG TCTCCCGCAA AGCAGCTCAT GAGCAAGGTT
GCGGGGGCTT TCACCAAAGG CAGCGGCTCC ACGCCAGCCC GTGCAACGGC AGCCGCCCCA
TCAACCGACC ACTGGGAAGA GTTCTAA
 
Protein sequence
MSNAISGRGL SVGQRLMTLG GAAICAIAAM LAVGYYKSSQ LDHSLNRAIE LKNKLEIVNE 
LRLANGEITL AAMDTIIDRE EGKVQPDRQS IFDKAGVALA NGSATVKQVA ADVGQSANIA
SYDSDVQKLR QEVTVELKKL VETQAPEEDY ARIDDVIDGA GGKLSDTLAN LSSAAGKLVE
SRVAAATEAS RSAITMQITI GLIAFFLVLG LQIIHARSVV NGIRNVRTSL KNIIDGNYDS
EILGLARGDE IGDIARSADI FRQAVIDKRT LEAEAEDSRK SRETEMRESE AAAAAERDRM
KAAVDALGKG LNRLAEGDLQ AVVDEAFPQE VERLRTDFNL VTTHLRNVMG EISINSSSIQ
ANANQMRSAA DDLARRTEQQ AASLEETSAA LAEITETVRT STQRAEDASH MVDNAKTYAE
QSGAVVSDAM AAMERIESAT GEIGKIINVV DEIAFQTNLL ALNAGVEAAR AGDAGKGFAV
VAQEVRALAG RAAEAARTIK DLVTKSSDEV RTGVELVTAT GEALHKIGED VLRINDHVKS
IVTSAREQSV GLSEINSAVG QMDQVTQQNA AMVEETNAAS HTLASDADNL GQLVGQFKIG
GAGETRPGSH QARPTSSRPE PARPTSAPTQ SPAKQLMSKV AGAFTKGSGS TPARATAAAP
STDHWEEF