Gene Avi_2860 details

Gene Information

• Locus tag: Avi_2860
• Symbol: mcpG
• ID: 7385974
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 2379122
• End bp: 2381128
• Gene Length: 2007 bp
• Protein Length: 668 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643651883
• Product: methyl-accepting chemotaxis protein
• Protein accession: YP_002550068
• Protein GI: 222149111
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAACG CAATTTCCGG CCGAGGCCTT TCCGTCGGCC AGCGTCTGAT GACCTTGGGC 
GGCGCTGCCA TCTGCGCCAT CGCGGCCATG CTGGCCGTCG GCTATTACAA GAGCAGCCAA 
CTGGATCACT CGTTGAACCG GGCGATAGAA CTCAAGAACA AGCTCGAGAT CGTCAACGAA 
TTGCGGCTTG CCAATGGTGA GATCACCCTT GCCGCAATGG ATACGATCAT TGACCGCGAG 
GAAGGCAAAG TCCAGCCGGA CCGCCAGAGC ATTTTCGACA AGGCTGGCGT GGCGCTTGCC 
AATGGGTCTG CCACCGTCAA GCAGGTCGCC GCAGATGTCG GACAGTCCGC AAATATAGCA 
AGCTATGACA GCGATGTGCA GAAGCTCCGC CAGGAAGTCA CGGTAGAATT GAAGAAACTG 
GTGGAAACCC AGGCTCCGGA AGAGGATTAT GCCCGGATTG ACGATGTCAT CGATGGCGCC 
GGCGGCAAGC TGAGCGACAC GCTGGCCAAT CTTTCCTCCG CCGCAGGCAA ACTGGTGGAA 
AGCCGCGTGG CTGCCGCGAC TGAGGCGTCC AGAAGCGCCA TCACCATGCA GATCACCATC 
GGTTTGATTG CATTTTTCCT GGTTCTCGGA TTGCAGATCA TCCATGCCCG TTCGGTCGTC 
AACGGCATCC GCAATGTCCG CACCAGCCTC AAGAATATTA TCGACGGCAA TTACGACAGC 
GAGATCCTCG GTCTGGCGCG CGGCGATGAA ATCGGTGACA TTGCCCGATC AGCTGATATT 
TTCCGTCAAG CCGTCATCGA CAAACGCACG CTGGAAGCCG AGGCTGAAGA CAGCCGAAAG 
AGCCGCGAAA CCGAGATGCG CGAGAGCGAG GCCGCAGCGG CTGCCGAGCG CGACCGGATG 
AAAGCCGCCG TCGATGCCTT GGGCAAGGGC CTGAACCGAC TGGCCGAGGG CGATTTGCAG 
GCAGTGGTCG ATGAAGCTTT CCCGCAGGAA GTCGAACGCC TGCGCACGGA TTTCAACCTT 
GTCACCACCC ATCTGCGCAA TGTCATGGGC GAGATCTCCA TCAATTCCAG TTCCATCCAG 
GCCAATGCCA ATCAGATGCG CTCCGCCGCC GACGATCTGG CGCGCCGCAC CGAACAGCAG 
GCCGCATCGC TGGAAGAAAC ATCGGCGGCA CTGGCTGAGA TTACCGAAAC GGTCCGCACC 
AGCACGCAGC GCGCCGAAGA TGCCAGCCAC ATGGTCGATA ATGCCAAGAC CTATGCCGAA 
CAGTCCGGTG CCGTCGTCTC CGATGCCATG GCGGCCATGG AGCGGATTGA AAGCGCCACC 
GGCGAAATCG GCAAGATCAT CAACGTCGTT GACGAGATCG CCTTCCAGAC CAATCTTCTG 
GCGTTGAATG CCGGCGTCGA AGCCGCCCGC GCCGGGGATG CCGGCAAAGG CTTTGCCGTG 
GTTGCCCAGG AAGTGCGCGC CTTGGCCGGA CGCGCTGCGG AAGCCGCCCG CACCATCAAG 
GATCTGGTCA CCAAATCAAG CGACGAAGTG CGCACCGGGG TCGAGCTTGT GACCGCCACC 
GGCGAGGCTT TGCATAAAAT AGGCGAAGAT GTGCTCCGAA TTAACGATCA CGTTAAGTCG 
ATTGTAACCT CGGCGCGCGA ACAATCAGTT GGCCTGAGTG AAATCAATTC CGCCGTCGGA 
CAGATGGACC AGGTCACGCA GCAAAATGCC GCCATGGTCG AAGAAACCAA TGCGGCAAGT 
CATACGCTTG CCAGCGATGC AGACAATCTT GGACAGCTCG TTGGGCAATT CAAGATCGGC 
GGCGCGGGCG AGACGCGGCC AGGATCACAC CAGGCGCGAC CGACATCAAG CAGACCTGAG 
CCGGCAAGAC CGACCTCAGC ACCGACGCAG TCTCCCGCAA AGCAGCTCAT GAGCAAGGTT 
GCGGGGGCTT TCACCAAAGG CAGCGGCTCC ACGCCAGCCC GTGCAACGGC AGCCGCCCCA 
TCAACCGACC ACTGGGAAGA GTTCTAA 

 

Protein sequence

MSNAISGRGL SVGQRLMTLG GAAICAIAAM LAVGYYKSSQ LDHSLNRAIE LKNKLEIVNE 
LRLANGEITL AAMDTIIDRE EGKVQPDRQS IFDKAGVALA NGSATVKQVA ADVGQSANIA 
SYDSDVQKLR QEVTVELKKL VETQAPEEDY ARIDDVIDGA GGKLSDTLAN LSSAAGKLVE 
SRVAAATEAS RSAITMQITI GLIAFFLVLG LQIIHARSVV NGIRNVRTSL KNIIDGNYDS 
EILGLARGDE IGDIARSADI FRQAVIDKRT LEAEAEDSRK SRETEMRESE AAAAAERDRM 
KAAVDALGKG LNRLAEGDLQ AVVDEAFPQE VERLRTDFNL VTTHLRNVMG EISINSSSIQ 
ANANQMRSAA DDLARRTEQQ AASLEETSAA LAEITETVRT STQRAEDASH MVDNAKTYAE 
QSGAVVSDAM AAMERIESAT GEIGKIINVV DEIAFQTNLL ALNAGVEAAR AGDAGKGFAV 
VAQEVRALAG RAAEAARTIK DLVTKSSDEV RTGVELVTAT GEALHKIGED VLRINDHVKS 
IVTSAREQSV GLSEINSAVG QMDQVTQQNA AMVEETNAAS HTLASDADNL GQLVGQFKIG 
GAGETRPGSH QARPTSSRPE PARPTSAPTQ SPAKQLMSKV AGAFTKGSGS TPARATAAAP 
STDHWEEF