| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2927 |
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| Symbol | mcpC |
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| ID | 7386107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2443404 |
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| End bp | 2445596 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651934 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002550119 |
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| Protein GI | 222149162 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0257741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATTA TTTCGGCTTT GCCGTTTAAG GTGCTTTTGA CGAGCCTTGG GATCGTGCCT
TTATTGGCAG CGATCGTGCT GGGTGCGATC CTGAGCTGGG AGGCCTGGGA AAACTATACG
AAAACGTCCA AGGCCGTGAC TCTGGAGCAA CTGGCACGGG CCGGGGGCAA TCTGTTGTTG
GTCATGCCCC TGGAGGGCGC GGCGCCGCCG GCAGCCAGGA CTGAGGCGCG GGCAACATCG
GATGCGGCCT ATGCGAAGGT GGTGAGCGCC TATGACGACG CCATCTCCGC TGGCTATGAT
GATGCAATCC TGAACGGCCT GAAGAACCGG CTTGTTGATT CTTTCGCCAA GATCGGCGAA
TTCCGGTCCG CTGTCGATGC CGATCGCGTT GACCCGATCA TGCCGCTGAA ATATCTCCAG
CCTATTTCCG CCATGGGAAT GGAATTGGCC GGCCGCGCTG CCAATCTCGT TGATGATCGC
CTCCTGTCAC AAGGCATCCA GGGCTATTAT TCCTTGTTGC AGGTCAACGA TTCCTATCTG
ATCATCAACC GGATCGGCCA GGTTTATACC CAAAAAGGCA CGCTTTCTCC AGAAGAGTCG
GCCCGTTTCC ATGCTGGTTT CAATAAGGCC ATGATCTACT TGAAGCCGAT GCAGCAATTC
CTGCCCAAGC CGTTGAACGA TCAGTACGAC CAGTTCTGGC GAGGAAGCGA TGTCGCGCCT
GTCCAGAACG CCGTAGATGC GATGGCCGTG GGTCGTACCT ATACCCCCGC CACAGGCGAT
CTCGACACCT GGAACACCAT CATGGCCAAG CGACGGGATT TCGTTGCCAA CCTGATCAAA
TCCACGTCGC AGGATCTGGG CGCATTTGCC GATGCGCAGC TGTCGGACGC GCGTAACTCC
CTCTATTTCA TGGTGACGGC CCTCGGCATC CTGGTTTTGG TCACCGCGCT GTTCAGCATT
TCGGTCCTGC GGATTCTTTC GAATGCCATT CGCCGGATAT CGGGCCGGAT GACCGGCCTG
GCCGAGGGGG ACAAGGTCAC CACTATTCCC TATCTTGACC GCAAAGATGA GATCGGCGAC
ATCGCCCACT CCGTCGAGGT GTTCCGCCAG GCGGCACTTC GCAACGATGA ATTGGAACGG
TCGGCCCAGG AAAACCGCCG TCTTGCCGAA ATAGAGCGCG AGGAAATGCA GGCCAAGGCC
GAGGCCGAGG CAAATGAGCG TCTCGCCCGC GCCACCGGTG CCCTGGCCTC AGGGCTGCGC
CAGCTGGCAG CGGGTGATTT GCTCTGCGAA ATCCAGGAGC AGTTTGCACC GCAATTTGAG
GCATTGAGGC ATGACTTCAA TACATCGGTC AACCAGCTGC GCTCCGTTCT GATTTCCGTC
GGCATATCCG CGACTGGCGT GCGCAACGGC AGCGGTGAAA TTTCCGATGC CTCCAATGAT
CTTTCCAAGC GGACCGAAAC CCAGGCAGCC TCACTGGAGC AGACAGCCGC GGCTCTGGAA
GAAATCACCG CCAATGTGAA GGCGACCTCG CTGCGAACCG GCCAGGCCCG TGATCTCGTT
CGGGATGCTC GCGGCCGTGC CGACAAGTCC AGCAACGTGG TCGGCAATGC GGTAACCGCG
ATGGGCCGGA TCGAGAATGC GTCTCGGCAG ATTGTCCAGA TCATTGGCGT GATCGATGAA
ATCGCGTTCC AGACCAATCT CCTGGCGCTC AATGCCGGTG TTGAGGCAGC GCGAGCTGGA
GAAGCGGGCA AGGGCTTTGC GGTCGTTGCT CAGGAAGTAC GCGAGCTTGC CCAACGTTCC
GCCAATGCGG CAAAGGAAAT CAAACAGCTG ATCGGAAATT CTGAAGTTGC GGTTTCCGAG
GGAGTCAAGC TGGTCCACGA TACCGGTGAG GGCCTGGGTG CCATCGCGCA GGTGGTCGAG
GAGATTAATG CACATATGGA TGCCATCGCG ACAGCCGCCC AGGAGCAATC GGTGGGGCTT
GGCGAAGTCA ATGTCGCCGT CAATCATATG GATCAGGCCA CGCAACAGAA TGCCGCAATG
GTCGAAGAGA TGAATGCTGC CGGTGCAGGG CTTGCCGATG AAGCAGCCAA GCTCTCGGAA
CTGCTGGCGA ATTTCAAGAC AGGCCACCAG AACTCCGGTC GTGCTACGAT CTCTTCCGGA
CGGGCGGATT TCGCGCGCCA GCGGGTCGCC TAG
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| Protein sequence | MRIISALPFK VLLTSLGIVP LLAAIVLGAI LSWEAWENYT KTSKAVTLEQ LARAGGNLLL
VMPLEGAAPP AARTEARATS DAAYAKVVSA YDDAISAGYD DAILNGLKNR LVDSFAKIGE
FRSAVDADRV DPIMPLKYLQ PISAMGMELA GRAANLVDDR LLSQGIQGYY SLLQVNDSYL
IINRIGQVYT QKGTLSPEES ARFHAGFNKA MIYLKPMQQF LPKPLNDQYD QFWRGSDVAP
VQNAVDAMAV GRTYTPATGD LDTWNTIMAK RRDFVANLIK STSQDLGAFA DAQLSDARNS
LYFMVTALGI LVLVTALFSI SVLRILSNAI RRISGRMTGL AEGDKVTTIP YLDRKDEIGD
IAHSVEVFRQ AALRNDELER SAQENRRLAE IEREEMQAKA EAEANERLAR ATGALASGLR
QLAAGDLLCE IQEQFAPQFE ALRHDFNTSV NQLRSVLISV GISATGVRNG SGEISDASND
LSKRTETQAA SLEQTAAALE EITANVKATS LRTGQARDLV RDARGRADKS SNVVGNAVTA
MGRIENASRQ IVQIIGVIDE IAFQTNLLAL NAGVEAARAG EAGKGFAVVA QEVRELAQRS
ANAAKEIKQL IGNSEVAVSE GVKLVHDTGE GLGAIAQVVE EINAHMDAIA TAAQEQSVGL
GEVNVAVNHM DQATQQNAAM VEEMNAAGAG LADEAAKLSE LLANFKTGHQ NSGRATISSG
RADFARQRVA
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