| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5151 |
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| Symbol | mcpC |
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| ID | 7380952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 142294 |
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| End bp | 144624 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643648805 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002547042 |
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| Protein GI | 222106251 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTCT CCATCAGAAA TGTGCTCATT AGCGTTTTCG CCCTGCTCAG CCTTATGCTG
AATGTGCTGG TTGGAAATTC CATGCTGTCT TCGTACCGGA CCTATCAGGT CAATGCCGAA
GTTTCGGAAC TGACCGGTTT TGACAAGGCG TTGTTCAAGG CGCTTTTGGC ATTTCGCAGC
GAGCGCGGCG ACAGCGCCTC CGCCCTGTCG ATCTCCATTG CCGATGGCGC TGGCTCCGTC
CAATCGGTGC AGAAAAACCG GGCGGTTGTC GATGCTGGTA TGAATGAGGC AAAAGTGATC
GCTGGAGGGA TCAAGGCTAC CGACTTGTCG GCGCCGATCG CAACGGTGTT GGCCACTTAT
GAAAAAGTCG CGACCTATCG TAAAACCATC GATGCCGAAT TGGCAAAGCC GCTTGAGGCT
CGTGACGCAA GCATCACCAA GGCGTCAATG GATCTGGGCG GGACGTTCCT GGCCGATCTT
GAAAAGGCGT CCGAGGCTGC GGAAGGCCGC ATGCGCACGC TCGACGCGGC GTTGATGCCG
ATGATCCAGA TGCGCGCCTA TGCATGGTCG ACCCGTGCCC TTGGCGGCGG CAGTGCCTTG
ATCCTCAACA ACGCCGTGAC CTCTGGCCAG CAGATTTCAG CTGAGAACCA GGTCAAACTG
GCCGCGGGAG ACGCCAATGT CGCCTATGCG TGGAAAGCTG TTCGGGTGCT CGTCGATCAT
AAGGATACGC CCCAGGCCAT CAAGGATGGT TTCAAGGTTG CCGATGCAGC ATATTTTACC
GGCGACTACG CTAAAATGCG CGCCGACGTC ATTGCCAAAC TGAGTGCGGG CGAAAAGTCG
CCGCTGACAA TCGATCAATG GAGAGCGCCG ACCACGGCTG CCCTGGGGAA GGTTGCGGAT
ATCGCATCGC TTGCCATGGA TACGTTGAAC GCCAATGCCG CAACGGCAAA GTCTACAGCG
CTGACCCATA CATTGTCGTT CCTGGCGCTC TTCCTGTTGG TGTTGGCGCT CGGCATCATC
GGCTTGGCCG TCATCGTCCG CAAGGTCATT CGCCCGATCG GCGCGTTGAC ACGTTGCATG
GGCGCATTGG CCGACGGCGA CCTGTCGGTT GTCGTTCCCG GCGCCAAACG CCGGGACGAA
ATGGGCGAAA TGGCGCGTTC CGTGGAAGTA TTCCAGATTG CAGCCATCCG CAACAAGGAG
CTAGAGGCCA ACGCCGAGGA AAACCGCAGG ATCGCCGAGC GCGATCGCAT CGAGACGCAG
CGCCGTATAG AAGAGGAGGC CGAGGAGCGA CTGACCCGCG CCACCGGCGC GCTGGCAAGC
GGTCTGCAGA AACTTGCCTC CGGTGATATG CTCTGTGAGA TTTCCGAGGA GTTTGCGCCG
CGCTTCGAGG AACTGCGCCA GGACTTCAAC GCCTCCGTCA GCCAGTTGCG CACCACACTT
CTGGCCGTCG GTGGCTCTGC CCTGGCCGTG TCGGGTGGCA GCAGCGAAAT CTCGCATGCA
TCGGACGACC TGGCCAAGCG AACCGAGCAG CAGGCTGCTT CGCTCGAAGA GACCGCCGCA
GCCCTTGAGG AAATCACCGC CAATGTGAGA GCGACCTCGA AGCGAACCGG CGAGGCCCGC
GATCTGGTGC GTGATACCAA AAGCCGTGCC GAGCAATCGG GTGTCGTCGT CAATAATGCT
GTCACAGCAA TGGAACGCAT TGAACACGCC TCCCGCCAGA TCGGCCAGAT CATCGGCGTG
ATTGATGAGA TTGCCTTCCA GACCAATCTG CTGGCCTTGA ATGCCGGGGT GGAAGCCGCC
CGCGCCGGTG AAGCAGGTAA GGGCTTTGCC GTCGTCGCCC AGGAAGTCCG TGAACTGGCG
CAACGTTCGG CCAATGCCGC CAAGGAAATC AAATCGCTGG TCTCCAATTC GGAAGTCGCC
GTCAGCGAAG GCGTCAAACT GGTCAACGAT ACCGGCGAAG GGTTGACGGC GATCGCCAGC
CTCGTCCAAT CGATCAATCA GCATATGGAT GCAATCGCCA CGGCAGCGCA GGAACAGTCC
GTGGGGCTTG GGGAAGTCAA TACCGCTGTC AACCACATGG ACCAGGCGAC GCAGAAGAAT
GCGGCCATGG TCGAGGAAAT GAACGCGGCC GGCGCTGGCC TGGCCCAGGA AAGCGGCAAG
CTGACCGAAT TGCTCGGCCA GTTCCGCACG GGAGATAACC GGCAGGCCGG ACACGCGCCC
ACTGGACGAG CCCCTGCCAG ACCTGCAACT CGGCCTGCCG CACCATCACG CCAGACCTAT
GCCACTCAGG GCAATGCTGC GCTGAAGGGC GAGAGTTGGG AAGAGTTCTG A
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| Protein sequence | MTLSIRNVLI SVFALLSLML NVLVGNSMLS SYRTYQVNAE VSELTGFDKA LFKALLAFRS
ERGDSASALS ISIADGAGSV QSVQKNRAVV DAGMNEAKVI AGGIKATDLS APIATVLATY
EKVATYRKTI DAELAKPLEA RDASITKASM DLGGTFLADL EKASEAAEGR MRTLDAALMP
MIQMRAYAWS TRALGGGSAL ILNNAVTSGQ QISAENQVKL AAGDANVAYA WKAVRVLVDH
KDTPQAIKDG FKVADAAYFT GDYAKMRADV IAKLSAGEKS PLTIDQWRAP TTAALGKVAD
IASLAMDTLN ANAATAKSTA LTHTLSFLAL FLLVLALGII GLAVIVRKVI RPIGALTRCM
GALADGDLSV VVPGAKRRDE MGEMARSVEV FQIAAIRNKE LEANAEENRR IAERDRIETQ
RRIEEEAEER LTRATGALAS GLQKLASGDM LCEISEEFAP RFEELRQDFN ASVSQLRTTL
LAVGGSALAV SGGSSEISHA SDDLAKRTEQ QAASLEETAA ALEEITANVR ATSKRTGEAR
DLVRDTKSRA EQSGVVVNNA VTAMERIEHA SRQIGQIIGV IDEIAFQTNL LALNAGVEAA
RAGEAGKGFA VVAQEVRELA QRSANAAKEI KSLVSNSEVA VSEGVKLVND TGEGLTAIAS
LVQSINQHMD AIATAAQEQS VGLGEVNTAV NHMDQATQKN AAMVEEMNAA GAGLAQESGK
LTELLGQFRT GDNRQAGHAP TGRAPARPAT RPAAPSRQTY ATQGNAALKG ESWEEF
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