| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3194 |
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| Symbol | |
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| ID | 4075298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 187476 |
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| End bp | 189320 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004703 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_611430 |
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| Protein GI | 99078172 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.311641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCA CTGAAATCAA ATCTTCCGCC CTTAAGGGAT GGTCCATTTT CACCAAGCTC
AGCTTGTTGT TGGCAGCGGC AACGCTGGTG ATCGTAACCT TCATCACCGT CGCAAACAAA
TTGATCATTG ACCAAACCGT CCGGGAAGGT GTGCGTACCC TTGGTCAGAA TGTCACCTAT
TCAGTCGCCT CGCGCAGCGG CGGGGCGATC CGTTTTGGCG ATCAGGACAA GCTGCTCGCA
GATTTGTCTT TGGTCATCGA AATGTCCGAA GGGCGCTCGC TGAACGGGAT TGCGGTCAAC
GGGGACGGCA ACCTGATTGC CTCCGCTGGC GACGCAGGTG AAGCGCAACT TGACCTGCTC
TCCGAACTCG CTCTTGCGGC ATTTGAGAGC AACGAGATGC AAGTGAGCGC CAATGGTGAA
GCCTTTGCCG CTCCCGCCAC CACCTCCAAA GGTGTCCCCG TTGGGGCGAT TGCCATGACT
TGGTCAAGCA AAGCAGCCAT GATCGGCGCT CTTCAGCAAC AAATGATTGC CTATGGCGCC
GGTGCTGTGC TGTTTTTTGC GATGATGTTC ATTGCCTCCA TGGTCCTGCG CCGGATCGTC
AGCGCTCCTT TGAAGGATCT CGGCACCAGC ATCGTCGACA TTGCCGCAGG GCAGTATGAC
AAGCCTGTCG AGTATCTGGA ACGAGCGGAT GAGGTGGGGC GCATCGCCCG AAATGTTGAA
AACCTCAAGC AGCAGCTGGC CCTGGCACAC GCCAAGGAAA CAGAACGCGA AACCGCACAA
GCCCATCAGA AACACGTCGT CGATGCCCTG AACAACGCGC TGAAAAGCAT GTCTGACGGC
GACCTTACCC AGGCGATTGA TGATCCTTTT GCCGAGGAAT ACGAAACCCT GCGCCGCAAC
TTCAATACGA CGCGAGCCAC CATGGTCAGC ATCATCGACT CCGTCATAGA GAGCAGCGAG
CGCATTCGCT CAAGTGCGGA ACAGATCAGC GTCTCGTCTG CTGACTTGTC TCAGCGCACC
GAAAGCCAGG CTGCCACGCT TGAGGAAACC GCGGCCGCGA TGGAAGAGCT CAACGGCAGC
GTGCGCTCCG CAGCCGGTGG CGCGCGTGAA GTCGAAGGCA TCATGGAAGA AACCCGTGCC
ACTGCCGAAC AGAGCAGCAA GGTGGTTTCA GATGCAGTGG AAGCCATGTC CAACATTGAG
GCCTCCTCGG TCAAGATCTC CAAGATTCTG ACCATGATCG ACGACATTGC ATTCCAGACG
AACCTCCTCG CGCTCAACGC AGGCGTCGAA GCCGCGCGCG CCGGCGAAGC AGGCCGTGGC
TTTGCGGTTG TGGCCTCTGA GGTCCGCGCC CTCGCGCAAC GGTCATCGGA TGCCGCGCAA
GAGATTAAGC ACCTGATCGT CGAGAGCACG GAACAGGTTG GTGAAGGGGT GCGCCTTGTA
GGCCGTACGG GTGAGGAGCT CGACAAGATC ATCGGTCGTG TCGGGACGAT CTCCGGTCAC
GTCAGCGGCA TCGCAACCGG GGCAGAGGAA CAGTCGACCA CTTTGAACGA GATCAACACC
GGCGTTTCGC AACTGGATCA GGTGACGCAA CACAACGCGG CCATGGTTGA GGAAACGACC
GCTGCGAGCC AGGTGTTGCG CAATGATGCC ACGCAACTCG CGCGTGTCGT GGCGATCTTC
AAGACCGGTG ACACCAAGCG CAAATCCCAA TCAGAACCTG AAGCCCCCAC TGTGGCACAG
GCAGATGTGT CGCATGCCTA CGCGGCAGAA GAATCCCCCC AAGAGGCGCC CGCGGCAGAC
GCGCAGATTC TGCAGAAGAA AGCGGTGGGG TGGGAGGACT TCTAA
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| Protein sequence | MATTEIKSSA LKGWSIFTKL SLLLAAATLV IVTFITVANK LIIDQTVREG VRTLGQNVTY
SVASRSGGAI RFGDQDKLLA DLSLVIEMSE GRSLNGIAVN GDGNLIASAG DAGEAQLDLL
SELALAAFES NEMQVSANGE AFAAPATTSK GVPVGAIAMT WSSKAAMIGA LQQQMIAYGA
GAVLFFAMMF IASMVLRRIV SAPLKDLGTS IVDIAAGQYD KPVEYLERAD EVGRIARNVE
NLKQQLALAH AKETERETAQ AHQKHVVDAL NNALKSMSDG DLTQAIDDPF AEEYETLRRN
FNTTRATMVS IIDSVIESSE RIRSSAEQIS VSSADLSQRT ESQAATLEET AAAMEELNGS
VRSAAGGARE VEGIMEETRA TAEQSSKVVS DAVEAMSNIE ASSVKISKIL TMIDDIAFQT
NLLALNAGVE AARAGEAGRG FAVVASEVRA LAQRSSDAAQ EIKHLIVEST EQVGEGVRLV
GRTGEELDKI IGRVGTISGH VSGIATGAEE QSTTLNEINT GVSQLDQVTQ HNAAMVEETT
AASQVLRNDA TQLARVVAIF KTGDTKRKSQ SEPEAPTVAQ ADVSHAYAAE ESPQEAPAAD
AQILQKKAVG WEDF
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