| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3179 |
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| Symbol | |
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| ID | 4075349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 162710 |
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| End bp | 165367 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638004682 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_611415 |
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| Protein GI | 99078157 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.498273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGTC AAATCGGCCC CAAAGGAGCA AAGTTCCTGC GCCGCCTCAA CCCGCTTTCC
AGTATTCGCG GCAAGATTAC ATTCATTTTG CTGGCATTGC TGATGATGGT CGGTGGCGCG
GGCTATCTGA TCCTTCAGTC GTTCGACCGC GTGTCACGCA GTGTCGGAGA AATGACGGAG
CGGGACCTGC CGCAGCTCGC GCAGAGCAAT GGTCTTATTC TGGCCGCCAC CAAGACCAAG
GATGCGATGA TCGAAATCTT GATGTCGCAA AACCCCGAGG CCTTGAAAAA CGCGGCGACC
CATGTCGAGA CGGCCTCGAC CGAACTTGCA TCTGCCGTCG CCGCGCTCCC CGCCGAGCAG
CAGCAGGCCT TTGAGGCGGA TCTGGCCAAA GTGGGCGCAA CATTGCAGGC CTCGATCGAC
GCCCGCGCGA CGTCCTTTGC CAACACAGAC CAGCTCAATG CGATGACGCA GGATCTGCAG
CGTCTGGCGG CGGACCTGCA GGCGGTCCTG CTGGAAACCG CAGATGACGC ATATTTCAAT
ACAGCGATGA AGGGCGAAGA CACGATCACC TCGATCGAGG AGACGTTGTT TGATCTGGCT
GAAAACAAGT TCGCCACCCT GCAAACCGTG TTGGAAATTC GCGCCGAAAT CAACTTTCTC
TCTGGCATCA CTCTGGCGAT GTCCTCCACC ACCGATCGGT CGATGTTGTC GATCTTCGGC
GATCTGGCGA TCTCGTCGCG GGACCGGTTG TCCGGTGCGA TCAGCTCCCT TGACGGGACC
GATGCAGGTG CAACCGCAGG CGAGGACCTT GCCATGATCT CTGCCGCGCT CTCGGACGCG
GTGGCAGCAG GGCGCGAGGG CCGCGCCGTT GACCGCGATG CGGTACTTTC CACCCGGCGG
GAGGCTGATG CGGTGCTGTC TTCGACAGTG GATGATCTCG TCTTTGAGCT GACAATTGCC
GCCGACGATG CGGCAACCGG CAACCGAGAT GCGATCCAGG GGCTGCTCGA CAACGAAGTT
GCCTTCCTCA ACCGGCTGCT GGAGATCAGT TCCTGGCTCA GCGCCTTCCA GATCGAAGCC
CTGAAAATCG CAACCGCGCA GACCTTTGAA CAGGCTGAGG TTGCCTCAAA AGCAATGCAG
GCCGCCTCGG GCGCCCTGGC GGGCTTTAGC GAGTTTGGCG GAGGTATCCT TGCGGACCAG
ATCGCGCAGA TGGCGGCCAT GGCGGATCCG GACACAGGCC TTGCCGCCTT TCGGATCAAG
TCCCTCGAAG CCAATCAGGC TGCAACCGAG GCGGCTTCGG CCACTGTGAA TGCAGTGCTG
CAGATCGCCG GTCAGGCCTC CCTGCGCGGA TTGGAAAGCC AGACCACGAT CACCAATCAG
GCTCTGGGCA TCGCCGCGGA CGCGACCGAG GTGCAAGCCA ACCTGCAGAC GATTGGCTGG
ATCGCACTGG CCTTCGTGGG TGTCGCACTC CTTCTCAGCC ACGTCCTGAT CATCCGCCCG
CTCAATGCGA TCAGCCTCAC CACCGAGCGG CTGTCACAGG GTGACATGAG CCCGGTGACC
GGCTTCAACC GGGCCAGCGA CGAAATTGCA CGGATCGCGC GCGCGCTGAC CGTGTTCCGC
GACGGGTTGG TCGAAAAAGA AGAACTCACC CGGATCGCCG ATGAGGAACG GGCCGAAAAC
CAGGCCCGTC AGACCGCCGC TGTCGAAGCG ATTGGCATGG GGCTGGCACG CCTCGCCCGA
GGCGACCTGA CCTATCGCAT CGATCAGGAG CTCACAGAGG GTTACGCCCA GCTCAAGGAA
GACTTCAACA GCACGGCGCA GACCTTGAAC ATGACGGTTG TGGACGTGGT GCAGCTGGCG
GATTCGATCC GCAATGGCTC GTCCGAAATC AGCCAGGCCT CTGATGATCT CTCGCAACGC
ACCGAAAGCC AGGCCGCGAC GCTGGAAGAA ACCGCCGCCG CGCTCGAGGA GCTGACCGCC
AGTGTGCGCT CTGCCGCAGA GGGCGCGCGG GATGCGGAAA ACACCACGAA CAAGGCGCGC
GAGCAGGCCA CCCAGAACGG TCAGGTCGTC GAGCAGGCCG TCACCGCCAT GCAGGAGATC
GAGAGCAGTT CGAGCCAAAT CGAACAGATC ATCGGCGTGA TTGACGACAT CGCCTTTCAG
ACCAACCTGC TGGCATTGAA TGCCGGCGTC GAAGCGGCGC GGGCGGGCGA AGCCGGGCGC
GGTTTTGCTG TGGTGGCCTC CGAGGTGCGC GGCCTCTCGC AACGCACAAC CGAAGCCGCA
CGCGACATCA AGGAGCTGAT TTCCAAGAGC AGCACCCAAG TCGAAGCCGG GGTGGATCTG
GTCGGACGCG CCGGACAGGC GCTTGGCGAC ATCCTTGAAC GGGTGACCCA TATCTCGGGG
CTGGTCAGCA CGATTGCTGA ATCAACTGAC GAGCAGGCCA CGGGGCTCGG TGAGGCCAAT
GTCGCGGTCT CACAGCTGGA TCAGGTGACT CAGCAAAACG CTGCAATGGT CGAAGAAACC
AACGCCGCCG GACAATTGCT GCGTCAGGAT GCGGAGAAAC TGGCAACCCT GATGGCGAAC
TTTACCGTGT CGTCAATCTC CTCGTCGGCG CAGGCTCCGG CAGAGCACGG GTCAAGCGCG
CCAGAGCAGG CTGCGTGA
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| Protein sequence | MLRQIGPKGA KFLRRLNPLS SIRGKITFIL LALLMMVGGA GYLILQSFDR VSRSVGEMTE
RDLPQLAQSN GLILAATKTK DAMIEILMSQ NPEALKNAAT HVETASTELA SAVAALPAEQ
QQAFEADLAK VGATLQASID ARATSFANTD QLNAMTQDLQ RLAADLQAVL LETADDAYFN
TAMKGEDTIT SIEETLFDLA ENKFATLQTV LEIRAEINFL SGITLAMSST TDRSMLSIFG
DLAISSRDRL SGAISSLDGT DAGATAGEDL AMISAALSDA VAAGREGRAV DRDAVLSTRR
EADAVLSSTV DDLVFELTIA ADDAATGNRD AIQGLLDNEV AFLNRLLEIS SWLSAFQIEA
LKIATAQTFE QAEVASKAMQ AASGALAGFS EFGGGILADQ IAQMAAMADP DTGLAAFRIK
SLEANQAATE AASATVNAVL QIAGQASLRG LESQTTITNQ ALGIAADATE VQANLQTIGW
IALAFVGVAL LLSHVLIIRP LNAISLTTER LSQGDMSPVT GFNRASDEIA RIARALTVFR
DGLVEKEELT RIADEERAEN QARQTAAVEA IGMGLARLAR GDLTYRIDQE LTEGYAQLKE
DFNSTAQTLN MTVVDVVQLA DSIRNGSSEI SQASDDLSQR TESQAATLEE TAAALEELTA
SVRSAAEGAR DAENTTNKAR EQATQNGQVV EQAVTAMQEI ESSSSQIEQI IGVIDDIAFQ
TNLLALNAGV EAARAGEAGR GFAVVASEVR GLSQRTTEAA RDIKELISKS STQVEAGVDL
VGRAGQALGD ILERVTHISG LVSTIAESTD EQATGLGEAN VAVSQLDQVT QQNAAMVEET
NAAGQLLRQD AEKLATLMAN FTVSSISSSA QAPAEHGSSA PEQAA
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