| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0520 |
|---|
| Symbol | |
|---|
| ID | 5160743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 576780 |
|---|
| End bp | 578690 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640552436 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001233663 |
|---|
| Protein GI | 148259536 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCAAGA AGCTCTCGAT CCGCTATCAG TTCGCCATGC TCGGTGCTTT TGGCGTCGCA
ATCACTGTCG CGGCGGTGGC GTTGAACCTG TTCGACTCAT ACCAGATGGA GTTACACTCT
AAGGAAGCCC AGGCCAGAGC ACTGGTCGCG AGCGCCGTCA CCTCGACTGA AACCTATGTC
CATCTCGCGG ATCAGGGAGT GATCACGAAA CAGAAGGCCC AGTCCCTCGC TCTCAAGGCT
CTGGGCGCGG CGCGCTTCGA TCACGGCAAC TACTTCTTCG TCTACGACCG GCACGGCGTT
GCGCTGGCAA ATCCGAAAAA GTCGGTGATC GGGAAAAATC TGGAGAACGT GAAGGATCCA
TACGGTCATT ACGTGATCCG CCCACTGATG CAGGCAGCGG CGAGCGGTCA TCCGATCTTT
CATGAATATT ATTGGCCGAA AGCGGGATCC TCGACTCCCC AGCCCAAGAT TTCCTACATG
GCGGAGGTGC CGGGCTGGCA CTGGATGATC GGGTCCGGTC TTTACATCAG TGATCTCAGA
ACGAATTTCT GGAACGGGGT GCTGCGTTTC GCCGCGATCT TCATTCCGGT TCTGTTCGCC
TTTCTTCTGC TCATGATTTA CATGCAGAAA AACATCGCGA ACATCCTCAA GCGCATGACC
TCGGTGATGA AGGCGCTGTC GACGGGCGAT TCCAGCGTTG ATGTGCCTTT CACCGACCGG
ACCGACGAGA TCGGCGGCAT GGCGAGCGCG GTCGAGATCT TCAAATCCGC GGGCATCGAG
AAGGCGCGGC TGGAAAACGA TGCCACGGCA GCCGCACGGC AGCGCGAAAC CGAGCGTGCT
CGTACGGAGG CGGAACGCGC CGCCGCCGCG CAGCAGCTCG CCACGGTGGT CGATTCTCTC
GCCCATGGCC TGGAGGAACT CTCGGCCGGC CGGTTGACGT TCCGACTGAC CGCCGCCTTC
GCAGCGGAAT ACGAACAGCT CCGGACAGAC TTCAATGGCG CGATGCAAAG GTTGCAGGAC
GCGATGCGCG TGGTTGCCAC AAATGCCTCG GCCATTCGCT CCGGCAGCGG CGAGATCTCC
AGCGCTGCGG ACGATCTGGC TCGCCGCACC GAGCAGCAAG CCGCGACCCT CGAGGAAACT
GCCGCAGCAC TCGACGAAAT CACGACGACG GTACGCAATA CCGCGGACGC AGCGGTGCAT
GCCCGAAATA TCGTCGATAC CGCGAAGCAG GACGCCGAGC ATGGCGGCTC CGTTGTGTCG
CAGGCGGTGC GGGCGATGGG GGAAATCGAG AACTCATCGA AGCAGATCGG CAACATCATC
GGCGTGATCG ACGAGATCGC CTTCCAGACC AACCTGCTGG CGCTGAACGC GGGTGTCGAG
GCGGCGCGGG CCGGCGAAGC GGGGCGCGGT TTCGCCGTGG TCGCCTCCGA AGTTCGGGCG
CTGGCGCAGC GCTCGGCCGA TGCCGCGAAA GAGATCAAGA CACTGATTTC CGCCTCCAAC
CAGCAGGTTG TCGCGGGCGT GGACCTTGTT GACGAGACGG GCAAGGCTCT CGAACGGATC
GTCCGCCAGA TCGCCGAACT CAACGACTCC GTTGCGAAGA TCGCCGCCTC GGCGCAGGAG
CAGTCGACCG GGCTGGTGCA GGTGAATACC GCCGTCAGCC AGATGGATCA GGCAACGCAA
CAGAACGCGG CCATGGTCGA GGAATCAACG GCTGCCAGCC ACAGCCTCGT TCAGGAAGCC
GAGCAGCTTA CCCAGCTGAT CGGGCGGTTC GATCTGGGCA CATCGCCCGC CCCCGCCTCA
CCGGGCAGAC TGCCGGTAAC GCCGCCGCGG CCCGCGGCAA AGCCGGCCCC CTTTGCCGCC
CCTAAGCGGC ACCTCGAAGG CGCCGATGCC GGCGATTGGG AGGATTTCTG A
|
|---|
| Protein sequence | MLKKLSIRYQ FAMLGAFGVA ITVAAVALNL FDSYQMELHS KEAQARALVA SAVTSTETYV
HLADQGVITK QKAQSLALKA LGAARFDHGN YFFVYDRHGV ALANPKKSVI GKNLENVKDP
YGHYVIRPLM QAAASGHPIF HEYYWPKAGS STPQPKISYM AEVPGWHWMI GSGLYISDLR
TNFWNGVLRF AAIFIPVLFA FLLLMIYMQK NIANILKRMT SVMKALSTGD SSVDVPFTDR
TDEIGGMASA VEIFKSAGIE KARLENDATA AARQRETERA RTEAERAAAA QQLATVVDSL
AHGLEELSAG RLTFRLTAAF AAEYEQLRTD FNGAMQRLQD AMRVVATNAS AIRSGSGEIS
SAADDLARRT EQQAATLEET AAALDEITTT VRNTADAAVH ARNIVDTAKQ DAEHGGSVVS
QAVRAMGEIE NSSKQIGNII GVIDEIAFQT NLLALNAGVE AARAGEAGRG FAVVASEVRA
LAQRSADAAK EIKTLISASN QQVVAGVDLV DETGKALERI VRQIAELNDS VAKIAASAQE
QSTGLVQVNT AVSQMDQATQ QNAAMVEEST AASHSLVQEA EQLTQLIGRF DLGTSPAPAS
PGRLPVTPPR PAAKPAPFAA PKRHLEGADA GDWEDF
|
|---|
| |