Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1117 |
Symbol | mcpA |
ID | 7386191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 945192 |
End bp | 947165 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643650596 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_002548803 |
Protein GI | 222147846 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.593573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTTT TAGCCAATGC GAGCATTCGC ACGAAAATTC TGTCGCTCAT TGTCCCGGCC TGCATGATCG GCGTCGGCGG GCTGGGCTAC GCGGCCAGTA GTTATAAGTC CACGGATACC GAATATTCTG ATTTCATCGC AACCGACAGT ATCGCGGCAA GCCAGATGTA TCGGACAACG ACCTCTCTGC TGGCGATGGG ATACGGCGCC TATCAGCTTA TCGCATACGA CGTTGGTTCA CTCGATGTGG CTACCGTCAA GGCAGCCTAT GCAGATGCGG TTTCGACCGT ATTCAAGCGT CTGGATGCTG CCAAGGCGCT TGTGCCCGAG CTGTCAGGTG ATATCGACCA GTTTGCCAGC CGCGCCCGCG ATATTCAGGC CCTGACCGAC AAGGCGGTTC AATTGGTTGC CGATGGAAAG CGCGATGAAG CCAGAGCTCT TCTCGTCAAG GCGGATCCAT TGATTGCCAA ATGGCGTGAC GATCTTCGCG ACTGGAATAA CACCAATACG ACGGCCCTCC TGAAAAAAAG TGATGCACTG ACCGACCAGA CGAATTCAAC CATCCTGACG TCATTGACCA TTGTCGGCAG CGTTATGCTT ATGGCCATCA TCCTGGCTCT GTTCGTCACC TCGCGTGGCA TTATCGGTCC GATCGATAAG CTTCGCAGCC GGATGATAGC GCTGGCAAAC GGTGAAACGC AGCAGGAAAT ACCAGGCCTG GCGCGCAAGG ATGAGGTTGG TCAGATGGCT GCCGCTGTCG GCGTGTTCCG CGACAATGCC GTCGAGCGCG CCCGTCTGGA GCAGGAAACC GCGGCCAATC GCAGCCTCTC GGAAAAAGAG CGTCTGGAGC GCGAGGAGCA AAAGGCCAGG GAAGCGGCGG ATATCCAATT TGCGGTCGAC AATCTGGCAA ACGGGCTTTC GCATCTGTCC GATGGCGACG TCTCCTATCG GATCGGCCAG CCTTTCGTCG CCCATCTGGA TGGCGTGCGC GCCAGCTTCA ACAGCTCGGC TGAAAAATTG CAGGAAGCGC TGACCCATGT CGCCCAGAAT GCTAGCGCTA TCGATGCGGG TGCCAATGAA ATAAAGTCGG CAGCTGATGA TCTGGCCAAG CGGACTGAAC AGCAGGCAGC TTCCGTCGAG GAAACGGCCG CAGCCCTGGA ACAAATCACC ACCACGGTGA AGGATTCGAC CCGTCGTGCC CAGGAAGCGG GAACCCTGGT TTCGCGCACC AAGGCCGGCG CAGAGCAATC CGGTGAAGTG GTGCGCCGTG CCGTGATCGC CATGGAACAG ATCGAAAAGT CATCGGCTGA GATTTCCAAC ATCATCAGCG TCATCGATGA AATCGCCTTC CAGACCAATC TTCTGGCGCT GAATGCCGGT GTCGAGGCAG CGCGTGCCGG TGAAGCTGGC AAGGGCTTCG CAGTCGTTGC CCAGGAAGTG CGCGAGCTTG CCCAGCGTTC CGCCAATGCG GCAAAGGACA TCAAGGCGCT GATCACCACC TCCAACAGCC AGGTCCAGTC CGGTGTGCAG CTGGTGGGTG AAACTGGTAC CGCACTGCAA ACCATGGTGG CCGAAGTGCA GGAAATTAAC CGGCATGTCA GCGCTATCGT CGAGGCGGCC CACGAACAGT CTTCCGGTCT CCAGCAGATC AATACCGCTG TGAACCAGAT GGACCAGGAT ACCCAGAAGA ACGCGGCAAT GGTGGAGGAA TCCACGGCTG CAAGCCACGG CCTGGCAAGA GAAGTCGCCT CGCTGAACCA GTTGCTGTCG CAATTCAAGC TGTCTGGCGG CGGGCAAAGT GGGTTTAATT CTGGATCGGC CTATGCCGCC CCGGTTCGTC CCGCCCCCAT TCATCCCGCA CAGGCTCCGG TGGCTTCACC CGCCCGTGCG CTTGGCCGCA AGATCGCCAG TGCCTTTTCC GGCAAATCGT CAGCGACGGC TGCTGCTTCC GATCAGTCCT GGGAAGAGTT CTGA
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Protein sequence | MSFLANASIR TKILSLIVPA CMIGVGGLGY AASSYKSTDT EYSDFIATDS IAASQMYRTT TSLLAMGYGA YQLIAYDVGS LDVATVKAAY ADAVSTVFKR LDAAKALVPE LSGDIDQFAS RARDIQALTD KAVQLVADGK RDEARALLVK ADPLIAKWRD DLRDWNNTNT TALLKKSDAL TDQTNSTILT SLTIVGSVML MAIILALFVT SRGIIGPIDK LRSRMIALAN GETQQEIPGL ARKDEVGQMA AAVGVFRDNA VERARLEQET AANRSLSEKE RLEREEQKAR EAADIQFAVD NLANGLSHLS DGDVSYRIGQ PFVAHLDGVR ASFNSSAEKL QEALTHVAQN ASAIDAGANE IKSAADDLAK RTEQQAASVE ETAAALEQIT TTVKDSTRRA QEAGTLVSRT KAGAEQSGEV VRRAVIAMEQ IEKSSAEISN IISVIDEIAF QTNLLALNAG VEAARAGEAG KGFAVVAQEV RELAQRSANA AKDIKALITT SNSQVQSGVQ LVGETGTALQ TMVAEVQEIN RHVSAIVEAA HEQSSGLQQI NTAVNQMDQD TQKNAAMVEE STAASHGLAR EVASLNQLLS QFKLSGGGQS GFNSGSAYAA PVRPAPIHPA QAPVASPARA LGRKIASAFS GKSSATAAAS DQSWEEF
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