| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0839 |
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| Symbol | |
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| ID | 4077545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 884254 |
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| End bp | 887037 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006137 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_612834 |
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| Protein GI | 99080680 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.587759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.752939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATC CGTCTGAAGT CCAATCAAGA CCTCGCCGCA AATTTGGTAT TTTCCGCAGT
GTGCGCTCTA AACTCAGTGC TGTCTTGGTG CTTCTGGCCG CGGGCATTAC CCTATTTGGT
TATATCACTT ATGGGCTGCT CATGCAGGTC TCCGGGCATA TTACCGAACT GAATGACGAA
AACCTTCCCG ACCTCGAAGT CTCGCAAGAC ATCACCCTTG CGGCCGATAT GGCCAAAGAC
AGCATGATTA CCATGCTGGT GGTGGATAAT GCCGCGGGCA TCGATCAGGC CATGGGCGAG
GTGGACGCCG CGCGCACGGC GCTGGGCAGT GCGATTGCAG AGCTCAACGA CGATATCGAA
CCCCAGTTTT CCGCAAGCCT TGATGAGGTG TCTCAGGCTC TTGCGGATCT TGCCGAGGCC
CGCAGGGTCA CTTTCGCAAG TGATGACCAG ATTGAGGCCA GAGTACGCGA CATGCAAAGC
ATCATCAGCG AACTCAGCGT CGTCATGGCG GAACTGTCGC GCTCTGCCGC CATCGAATTG
CGACAGGGCG CCGAGGCGAC AGATCAGAAA ATTGACAATA CGGTCACGCG CCTGGTCGAG
GTGGATTTTT ACAATCAATC GCTCCTGCTG GAGGCCCAGG CCGAACTCAA TCTGCTGACC
GGCGCCGCCG TGTCGGCCGG AGGGACCAAA GACCCCGAGA CCCTGGCCCA GATAGAGGCC
ATGGCTGAAA AATCGCGCGA CCGTCTCTTG GAAATCACCG ACATTATCAG CGAACGCGCT
CCCGAGATTT TTGACACCTC ACTCCTGATT ACGGCTGTGT TTACGCTCGA GACGGTGCTG
GCGCAGAGCC TGTTTCCCTC CGAAACCCTG CGCAAGGCTG CATTGAGCGC CCGCGCCGAC
ACAGCAAAAG CCATTGATAC GGCAATCAAC GCCCAGATGC GCAGTTTGCT GGCATCGGTT
AACGCGGCGA AGGATGCGAA CGGCGATGCG CTCGAGTTGC TGCTCACCAA TGAGGTGGGC
TTTCTGCGAG AGCTGGTTGA GATCGGGATC GCGATCAACA TGTTCCAGGT TGCCGCTCTT
GATGCGGCTA CTTCCGATGA CGAAGCCAGC GTAAGTGACG CCGAGAAGGG AATGGTTGAA
GCAGGCGCCC TTTTTGCAAA GTATCAGGAT TTTCGCGATG GGCGGGTTGT CGAGTTCCTC
TCGCGCCTGA GCGATCTGAA TGATCCCGAA ACGGGCCTCG CAGCTCTTCA GATCAAAGGC
ATCAAAGCTG CAGAAGCATC AGACGCGGCC ACCCTCAATG CACGCACTTC GGTCGAGGCG
ATCTCCCAGC GCGCTGCGGA GTTCACCGCC AGCACACTCA GTGAAATCGA TGTGATGACG
GATGAAATCT TTGATGAAGT CGAGTTGATG GTGCGGGACC TAGTTGTCTC AGCCGCTGTT
GCAGGCGTGT GTTTCCTTGC GATATTTTCC GTTATTCAGC TTCTGATCCT GCGTCCGTTG
AACCGGATCA GTGCGAGCAC GGAACGGCTT GCGGAGGGGG ATCGCAGCCC TGTCACCGGG
TTTGAACGCA CCAGTACAGA GATTTACCGG ATCGCGCGCT CGCTGTCGGT GTTCCGCGAT
GGGATCGTCG AAAAAGAAGA GCTCGAAGAG ATGGCGGCCG CCGAACGGCA GGAGCGCGAA
CGGGTGCAGG CCAAGGCGGT CGAGGCGCTG GGCACGGGGC TGGAGCGGCT CTCCAGCGGG
GATCTGACCG GCCACATCCA CGAAGAACTC GGCGAGGGCT ATGACCGGCT GCGGCTCGAC
TTCAACCGCA CCCTCGACAC CTTGAATGAC ACCGTCGGCC AGGTGATCGA CACCTCTGCC
TCCATTCGCA ACGGCGCCTC GGAAATCAGC CAGGCCTCGC AGGACCTGTC GCATCGCACC
GAAAGCCAGG CCGCGACGCT CGAAGAGACC GCCGCCGCAT TGGATGAGAT GACGGCCAGC
GTGACCTCTG CCGCGGAAGG CGCGCGCGAT GTGGAACGCA CCTCGAACGA GGCGCGCAGC
GAGGCCGAAG CCAGTGGCGA TATCGTGCGC AGCGCTGTTT CGGCGATGAC CGAGATCGAA
CAGAGTTCGG GCAAGATCGC GCAGATCATC TCGGTGATTG ACGATATCGC CTTTCAGACT
AACCTCTTGG CACTCAATGC CGGTGTCGAG GCGGCCCGGG CCGGGGAGGC GGGGCGTGGC
TTTGCGGTTG TGGCCTCCGA GGTGCGGGGC CTTGCGCAGC GCTCTTCGGA TGCGGCGCTG
GAAATCAAGA ATCTGATCAG CGACAGCTCG AAACAGGTGG AGCGTGGTGT TGATCTTGTG
GGCAAGGCCG GTGAGGCGCT GGACAACATC CTGAACCGCG TGAGTCATGT CTCCGAGCTG
ATTTCCGGGA TCGCCACCGG TGCGCAGGAG CAATCCACGG GGCTCTTGGA AATCAACACG
GGTATGAACC AGCTGGATCA GGTGACCCAG CAAAACGCTG CCATGGTCGA GGAGGCCACT
GCGGCGAGCC AGCTCCTGAA CACGGATGCG GAGACGCTTG CGGATCTGGT GGCCCGGTTC
CAGACGGCAA ATACGGCGCG GACCCCTGCC GCGGGCGCTG GGGATGTGGG CGAGGACGCC
GGATCAGAGG CGCTTGCTCC CACAAGCTGG GGCGATGCAC AGGACATCGA GTGGGAGGCC
ACCGAGGTCG AAGAGCCCTT TGTCCCGGAG CAGACAGACT GGTCCGACTT TGATGGCGAC
GACACTCAGG CAACCGGGAC GTAA
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| Protein sequence | MSDPSEVQSR PRRKFGIFRS VRSKLSAVLV LLAAGITLFG YITYGLLMQV SGHITELNDE
NLPDLEVSQD ITLAADMAKD SMITMLVVDN AAGIDQAMGE VDAARTALGS AIAELNDDIE
PQFSASLDEV SQALADLAEA RRVTFASDDQ IEARVRDMQS IISELSVVMA ELSRSAAIEL
RQGAEATDQK IDNTVTRLVE VDFYNQSLLL EAQAELNLLT GAAVSAGGTK DPETLAQIEA
MAEKSRDRLL EITDIISERA PEIFDTSLLI TAVFTLETVL AQSLFPSETL RKAALSARAD
TAKAIDTAIN AQMRSLLASV NAAKDANGDA LELLLTNEVG FLRELVEIGI AINMFQVAAL
DAATSDDEAS VSDAEKGMVE AGALFAKYQD FRDGRVVEFL SRLSDLNDPE TGLAALQIKG
IKAAEASDAA TLNARTSVEA ISQRAAEFTA STLSEIDVMT DEIFDEVELM VRDLVVSAAV
AGVCFLAIFS VIQLLILRPL NRISASTERL AEGDRSPVTG FERTSTEIYR IARSLSVFRD
GIVEKEELEE MAAAERQERE RVQAKAVEAL GTGLERLSSG DLTGHIHEEL GEGYDRLRLD
FNRTLDTLND TVGQVIDTSA SIRNGASEIS QASQDLSHRT ESQAATLEET AAALDEMTAS
VTSAAEGARD VERTSNEARS EAEASGDIVR SAVSAMTEIE QSSGKIAQII SVIDDIAFQT
NLLALNAGVE AARAGEAGRG FAVVASEVRG LAQRSSDAAL EIKNLISDSS KQVERGVDLV
GKAGEALDNI LNRVSHVSEL ISGIATGAQE QSTGLLEINT GMNQLDQVTQ QNAAMVEEAT
AASQLLNTDA ETLADLVARF QTANTARTPA AGAGDVGEDA GSEALAPTSW GDAQDIEWEA
TEVEEPFVPE QTDWSDFDGD DTQATGT
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