Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0839 |
Symbol | |
ID | 4077545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 884254 |
End bp | 887037 |
Gene Length | 2784 bp |
Protein Length | 927 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638006137 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_612834 |
Protein GI | 99080680 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.587759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.752939 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATC CGTCTGAAGT CCAATCAAGA CCTCGCCGCA AATTTGGTAT TTTCCGCAGT GTGCGCTCTA AACTCAGTGC TGTCTTGGTG CTTCTGGCCG CGGGCATTAC CCTATTTGGT TATATCACTT ATGGGCTGCT CATGCAGGTC TCCGGGCATA TTACCGAACT GAATGACGAA AACCTTCCCG ACCTCGAAGT CTCGCAAGAC ATCACCCTTG CGGCCGATAT GGCCAAAGAC AGCATGATTA CCATGCTGGT GGTGGATAAT GCCGCGGGCA TCGATCAGGC CATGGGCGAG GTGGACGCCG CGCGCACGGC GCTGGGCAGT GCGATTGCAG AGCTCAACGA CGATATCGAA CCCCAGTTTT CCGCAAGCCT TGATGAGGTG TCTCAGGCTC TTGCGGATCT TGCCGAGGCC CGCAGGGTCA CTTTCGCAAG TGATGACCAG ATTGAGGCCA GAGTACGCGA CATGCAAAGC ATCATCAGCG AACTCAGCGT CGTCATGGCG GAACTGTCGC GCTCTGCCGC CATCGAATTG CGACAGGGCG CCGAGGCGAC AGATCAGAAA ATTGACAATA CGGTCACGCG CCTGGTCGAG GTGGATTTTT ACAATCAATC GCTCCTGCTG GAGGCCCAGG CCGAACTCAA TCTGCTGACC GGCGCCGCCG TGTCGGCCGG AGGGACCAAA GACCCCGAGA CCCTGGCCCA GATAGAGGCC ATGGCTGAAA AATCGCGCGA CCGTCTCTTG GAAATCACCG ACATTATCAG CGAACGCGCT CCCGAGATTT TTGACACCTC ACTCCTGATT ACGGCTGTGT TTACGCTCGA GACGGTGCTG GCGCAGAGCC TGTTTCCCTC CGAAACCCTG CGCAAGGCTG CATTGAGCGC CCGCGCCGAC ACAGCAAAAG CCATTGATAC GGCAATCAAC GCCCAGATGC GCAGTTTGCT GGCATCGGTT AACGCGGCGA AGGATGCGAA CGGCGATGCG CTCGAGTTGC TGCTCACCAA TGAGGTGGGC TTTCTGCGAG AGCTGGTTGA GATCGGGATC GCGATCAACA TGTTCCAGGT TGCCGCTCTT GATGCGGCTA CTTCCGATGA CGAAGCCAGC GTAAGTGACG CCGAGAAGGG AATGGTTGAA GCAGGCGCCC TTTTTGCAAA GTATCAGGAT TTTCGCGATG GGCGGGTTGT CGAGTTCCTC TCGCGCCTGA GCGATCTGAA TGATCCCGAA ACGGGCCTCG CAGCTCTTCA GATCAAAGGC ATCAAAGCTG CAGAAGCATC AGACGCGGCC ACCCTCAATG CACGCACTTC GGTCGAGGCG ATCTCCCAGC GCGCTGCGGA GTTCACCGCC AGCACACTCA GTGAAATCGA TGTGATGACG GATGAAATCT TTGATGAAGT CGAGTTGATG GTGCGGGACC TAGTTGTCTC AGCCGCTGTT GCAGGCGTGT GTTTCCTTGC GATATTTTCC GTTATTCAGC TTCTGATCCT GCGTCCGTTG AACCGGATCA GTGCGAGCAC GGAACGGCTT GCGGAGGGGG ATCGCAGCCC TGTCACCGGG TTTGAACGCA CCAGTACAGA GATTTACCGG ATCGCGCGCT CGCTGTCGGT GTTCCGCGAT GGGATCGTCG AAAAAGAAGA GCTCGAAGAG ATGGCGGCCG CCGAACGGCA GGAGCGCGAA CGGGTGCAGG CCAAGGCGGT CGAGGCGCTG GGCACGGGGC TGGAGCGGCT CTCCAGCGGG GATCTGACCG GCCACATCCA CGAAGAACTC GGCGAGGGCT ATGACCGGCT GCGGCTCGAC TTCAACCGCA CCCTCGACAC CTTGAATGAC ACCGTCGGCC AGGTGATCGA CACCTCTGCC TCCATTCGCA ACGGCGCCTC GGAAATCAGC CAGGCCTCGC AGGACCTGTC GCATCGCACC GAAAGCCAGG CCGCGACGCT CGAAGAGACC GCCGCCGCAT TGGATGAGAT GACGGCCAGC GTGACCTCTG CCGCGGAAGG CGCGCGCGAT GTGGAACGCA CCTCGAACGA GGCGCGCAGC GAGGCCGAAG CCAGTGGCGA TATCGTGCGC AGCGCTGTTT CGGCGATGAC CGAGATCGAA CAGAGTTCGG GCAAGATCGC GCAGATCATC TCGGTGATTG ACGATATCGC CTTTCAGACT AACCTCTTGG CACTCAATGC CGGTGTCGAG GCGGCCCGGG CCGGGGAGGC GGGGCGTGGC TTTGCGGTTG TGGCCTCCGA GGTGCGGGGC CTTGCGCAGC GCTCTTCGGA TGCGGCGCTG GAAATCAAGA ATCTGATCAG CGACAGCTCG AAACAGGTGG AGCGTGGTGT TGATCTTGTG GGCAAGGCCG GTGAGGCGCT GGACAACATC CTGAACCGCG TGAGTCATGT CTCCGAGCTG ATTTCCGGGA TCGCCACCGG TGCGCAGGAG CAATCCACGG GGCTCTTGGA AATCAACACG GGTATGAACC AGCTGGATCA GGTGACCCAG CAAAACGCTG CCATGGTCGA GGAGGCCACT GCGGCGAGCC AGCTCCTGAA CACGGATGCG GAGACGCTTG CGGATCTGGT GGCCCGGTTC CAGACGGCAA ATACGGCGCG GACCCCTGCC GCGGGCGCTG GGGATGTGGG CGAGGACGCC GGATCAGAGG CGCTTGCTCC CACAAGCTGG GGCGATGCAC AGGACATCGA GTGGGAGGCC ACCGAGGTCG AAGAGCCCTT TGTCCCGGAG CAGACAGACT GGTCCGACTT TGATGGCGAC GACACTCAGG CAACCGGGAC GTAA
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Protein sequence | MSDPSEVQSR PRRKFGIFRS VRSKLSAVLV LLAAGITLFG YITYGLLMQV SGHITELNDE NLPDLEVSQD ITLAADMAKD SMITMLVVDN AAGIDQAMGE VDAARTALGS AIAELNDDIE PQFSASLDEV SQALADLAEA RRVTFASDDQ IEARVRDMQS IISELSVVMA ELSRSAAIEL RQGAEATDQK IDNTVTRLVE VDFYNQSLLL EAQAELNLLT GAAVSAGGTK DPETLAQIEA MAEKSRDRLL EITDIISERA PEIFDTSLLI TAVFTLETVL AQSLFPSETL RKAALSARAD TAKAIDTAIN AQMRSLLASV NAAKDANGDA LELLLTNEVG FLRELVEIGI AINMFQVAAL DAATSDDEAS VSDAEKGMVE AGALFAKYQD FRDGRVVEFL SRLSDLNDPE TGLAALQIKG IKAAEASDAA TLNARTSVEA ISQRAAEFTA STLSEIDVMT DEIFDEVELM VRDLVVSAAV AGVCFLAIFS VIQLLILRPL NRISASTERL AEGDRSPVTG FERTSTEIYR IARSLSVFRD GIVEKEELEE MAAAERQERE RVQAKAVEAL GTGLERLSSG DLTGHIHEEL GEGYDRLRLD FNRTLDTLND TVGQVIDTSA SIRNGASEIS QASQDLSHRT ESQAATLEET AAALDEMTAS VTSAAEGARD VERTSNEARS EAEASGDIVR SAVSAMTEIE QSSGKIAQII SVIDDIAFQT NLLALNAGVE AARAGEAGRG FAVVASEVRG LAQRSSDAAL EIKNLISDSS KQVERGVDLV GKAGEALDNI LNRVSHVSEL ISGIATGAQE QSTGLLEINT GMNQLDQVTQ QNAAMVEEAT AASQLLNTDA ETLADLVARF QTANTARTPA AGAGDVGEDA GSEALAPTSW GDAQDIEWEA TEVEEPFVPE QTDWSDFDGD DTQATGT
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