More than 300 homologs were found in PanDaTox collection
for query gene TM1040_3209 on replicon NC_008043
Organism: Ruegeria sp. TM1040



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008043  TM1040_3209  methyl-accepting chemotaxis sensory transducer  100 
 
 
782 aa  1586    Ruegeria sp. TM1040  Bacteria  normal  0.684679  normal 
 
 
-
 
NC_008044  TM1040_2453  methyl-accepting chemotaxis sensory transducer  43.86 
 
 
788 aa  583  1.0000000000000001e-165  Ruegeria sp. TM1040  Bacteria  normal  0.925334  normal  0.122382 
 
 
-
 
NC_008044  TM1040_1027  methyl-accepting chemotaxis sensory transducer  41.64 
 
 
795 aa  449  1.0000000000000001e-124  Ruegeria sp. TM1040  Bacteria  normal  normal  0.551962 
 
 
-
 
NC_008044  TM1040_0984  methyl-accepting chemotaxis sensory transducer  54.81 
 
 
608 aa  386  1e-106  Ruegeria sp. TM1040  Bacteria  normal  0.0666136  normal  0.983928 
 
 
-
 
NC_010581  Bind_3620  methyl-accepting chemotaxis sensory transducer  47.5 
 
 
677 aa  362  1e-98  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0125911 
 
 
-
 
NC_008044  TM1040_0359  methyl-accepting chemotaxis sensory transducer  60.17 
 
 
927 aa  355  2e-96  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0839  methyl-accepting chemotaxis sensory transducer  60.17 
 
 
927 aa  354  2.9999999999999997e-96  Ruegeria sp. TM1040  Bacteria  normal  0.587759  normal  0.752939 
 
 
-
 
NC_008044  TM1040_0433  methyl-accepting chemotaxis sensory transducer  35.57 
 
 
776 aa  350  7e-95  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0236  methyl-accepting chemotaxis sensory transducer  46.88 
 
 
660 aa  348  2e-94  Caulobacter sp. K31  Bacteria  normal  0.105118  normal 
 
 
-
 
NC_011666  Msil_1449  methyl-accepting chemotaxis sensory transducer  46.87 
 
 
647 aa  343  5.999999999999999e-93  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008043  TM1040_3177  methyl-accepting chemotaxis sensory transducer  46.02 
 
 
749 aa  342  1e-92  Ruegeria sp. TM1040  Bacteria  normal  0.726311  normal 
 
 
-
 
NC_008043  TM1040_3194  methyl-accepting chemotaxis sensory transducer  47.75 
 
 
614 aa  341  2.9999999999999998e-92  Ruegeria sp. TM1040  Bacteria  normal  0.311641  normal 
 
 
-
 
NC_009636  Smed_0051  methyl-accepting chemotaxis sensory transducer  38.02 
 
 
796 aa  338  2.9999999999999997e-91  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.000000874578 
 
 
-
 
NC_011369  Rleg2_0052  methyl-accepting chemotaxis sensory transducer  43.67 
 
 
778 aa  337  7e-91  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0947231 
 
 
-
 
NC_010338  Caul_0276  methyl-accepting chemotaxis sensory transducer  45.41 
 
 
657 aa  336  9e-91  Caulobacter sp. K31  Bacteria  normal  0.461968  normal  0.560518 
 
 
-
 
NC_011989  Avi_4013  methyl-accepting chemotaxis protein  33.01 
 
 
756 aa  335  2e-90  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1798  methyl-accepting chemotaxis sensory transducer  46.84 
 
 
615 aa  329  1.0000000000000001e-88  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.371991  normal 
 
 
-
 
NC_010338  Caul_0222  methyl-accepting chemotaxis sensory transducer  48.94 
 
 
642 aa  327  7e-88  Caulobacter sp. K31  Bacteria  normal  0.414219  normal  0.376796 
 
 
-
 
NC_008044  TM1040_1383  methyl-accepting chemotaxis sensory transducer  48.77 
 
 
705 aa  323  5e-87  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1141  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.92 
 
 
501 aa  322  1.9999999999999998e-86  Caulobacter sp. K31  Bacteria  normal  0.489477  hitchhiker  0.000166409 
 
 
-
 
NC_008044  TM1040_2002  methyl-accepting chemotaxis sensory transducer  57.28 
 
 
530 aa  320  6e-86  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0994  methyl-accepting chemotaxis protein  45.99 
 
 
649 aa  318  2e-85  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3179  methyl-accepting chemotaxis sensory transducer  50.76 
 
 
885 aa  318  3e-85  Ruegeria sp. TM1040  Bacteria  normal  normal  0.498273 
 
 
-
 
NC_011989  Avi_0988  methyl-accepting chemotaxis protein  43.5 
 
 
695 aa  318  4e-85  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3360  methyl-accepting chemotaxis sensory transducer  43.04 
 
 
648 aa  315  9.999999999999999e-85  Jannaschia sp. CCS1  Bacteria  normal  0.59059  normal 
 
 
-
 
NC_011989  Avi_2608  methyl-accepting chemotaxis protein  41.15 
 
 
655 aa  313  6.999999999999999e-84  Agrobacterium vitis S4  Bacteria  normal  0.445883  n/a   
 
 
-
 
NC_010338  Caul_2177  methyl-accepting chemotaxis sensory transducer  45.57 
 
 
602 aa  310  8e-83  Caulobacter sp. K31  Bacteria  normal  0.180362  normal  0.483778 
 
 
-
 
NC_009636  Smed_0489  methyl-accepting chemotaxis sensory transducer  43.13 
 
 
698 aa  310  9e-83  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.000832175  normal 
 
 
-
 
NC_010335  Caul_5142  methyl-accepting chemotaxis sensory transducer  45.55 
 
 
599 aa  309  1.0000000000000001e-82  Caulobacter sp. K31  Bacteria  normal  0.367406  normal  0.838811 
 
 
-
 
NC_010338  Caul_1355  methyl-accepting chemotaxis sensory transducer  45.5 
 
 
494 aa  310  1.0000000000000001e-82  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0606  methyl-accepting chemotaxis sensory transducer  43.15 
 
 
644 aa  308  2.0000000000000002e-82  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.307243 
 
 
-
 
NC_011984  Avi_9088  methyl-accepting chemotaxis protein  42.2 
 
 
761 aa  308  3e-82  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0563  methyl-accepting chemotaxis sensory transducer  44.78 
 
 
645 aa  307  5.0000000000000004e-82  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.73856 
 
 
-
 
NC_010338  Caul_4292  methyl-accepting chemotaxis sensory transducer  54.67 
 
 
535 aa  307  5.0000000000000004e-82  Caulobacter sp. K31  Bacteria  normal  normal  0.432431 
 
 
-
 
NC_010581  Bind_0110  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  54.19 
 
 
588 aa  306  1.0000000000000001e-81  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.885184  normal  0.0508963 
 
 
-
 
NC_011989  Avi_4113  methyl-accepting chemotaxis protein  46.21 
 
 
778 aa  306  1.0000000000000001e-81  Agrobacterium vitis S4  Bacteria  normal  0.433818  n/a   
 
 
-
 
NC_009484  Acry_2144  methyl-accepting chemotaxis sensory transducer  53.11 
 
 
556 aa  305  2.0000000000000002e-81  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0943  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.37 
 
 
793 aa  305  3.0000000000000004e-81  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.27721  normal 
 
 
-
 
NC_011989  Avi_0452  methyl-accepting chemotaxis protein  39.69 
 
 
622 aa  303  6.000000000000001e-81  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1117  methyl-accepting chemotaxis protein  42.07 
 
 
657 aa  303  8.000000000000001e-81  Agrobacterium vitis S4  Bacteria  normal  0.593573  n/a   
 
 
-
 
NC_010338  Caul_2435  methyl-accepting chemotaxis sensory transducer  52.82 
 
 
507 aa  302  2e-80  Caulobacter sp. K31  Bacteria  normal  0.264745  normal  0.414024 
 
 
-
 
NC_011989  Avi_0806  methyl-accepting chemotaxis protein  44.9 
 
 
842 aa  301  2e-80  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3729  methyl-accepting chemotaxis protein  41.58 
 
 
644 aa  301  2e-80  Agrobacterium vitis S4  Bacteria  normal  0.554142  n/a   
 
 
-
 
NC_010338  Caul_3214  methyl-accepting chemotaxis sensory transducer  51.69 
 
 
532 aa  301  3e-80  Caulobacter sp. K31  Bacteria  normal  normal  0.409706 
 
 
-
 
NC_011989  Avi_2927  methyl-accepting chemotaxis protein  44.63 
 
 
730 aa  301  3e-80  Agrobacterium vitis S4  Bacteria  normal  0.0257741  n/a   
 
 
-
 
NC_011369  Rleg2_3216  methyl-accepting chemotaxis sensory transducer  30.88 
 
 
771 aa  301  3e-80  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.556382 
 
 
-
 
NC_011989  Avi_1208  methyl-accepting chemotaxis protein  41.88 
 
 
604 aa  300  9e-80  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_2705  methyl-accepting chemotaxis sensory transducer  45.22 
 
 
509 aa  299  1e-79  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0520  methyl-accepting chemotaxis sensory transducer  48.33 
 
 
636 aa  297  5e-79  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5554  methyl-accepting chemotaxis protein  45.05 
 
 
653 aa  297  6e-79  Agrobacterium vitis S4  Bacteria  normal  0.0672502  n/a   
 
 
-
 
NC_012850  Rleg_3511  methyl-accepting chemotaxis sensory transducer  30.08 
 
 
771 aa  296  7e-79  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.595827 
 
 
-
 
NC_012854  Rleg_6402  methyl-accepting chemotaxis sensory transducer  44.67 
 
 
688 aa  296  8e-79  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.579482  normal  0.320846 
 
 
-
 
NC_012850  Rleg_0401  methyl-accepting chemotaxis sensory transducer  43.2 
 
 
615 aa  296  1e-78  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.000192098 
 
 
-
 
NC_012850  Rleg_0214  methyl-accepting chemotaxis sensory transducer  43.29 
 
 
663 aa  295  2e-78  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.287216 
 
 
-
 
NC_011989  Avi_2928  methyl-accepting chemotaxis protein  44.74 
 
 
792 aa  295  3e-78  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5151  methyl-accepting chemotaxis protein  42.31 
 
 
776 aa  294  3e-78  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3445  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.14 
 
 
746 aa  294  5e-78  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.2502  normal 
 
 
-
 
NC_011369  Rleg2_0221  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.51 
 
 
785 aa  293  7e-78  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2051  methyl-accepting chemotaxis sensory transducer  44.55 
 
 
717 aa  293  9e-78  Sinorhizobium medicae WSM419  Bacteria  normal  0.245091  normal  0.347836 
 
 
-
 
NC_011369  Rleg2_0185  methyl-accepting chemotaxis sensory transducer  45.02 
 
 
669 aa  291  2e-77  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0626  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.47 
 
 
726 aa  292  2e-77  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0369  methyl-accepting chemotaxis sensory transducer  42.82 
 
 
615 aa  291  3e-77  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  hitchhiker  0.00881781 
 
 
-
 
NC_011368  Rleg2_4524  methyl-accepting chemotaxis sensory transducer  44.42 
 
 
661 aa  291  3e-77  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.66296 
 
 
-
 
NC_009636  Smed_1613  methyl-accepting chemotaxis sensory transducer  44.81 
 
 
603 aa  291  4e-77  Sinorhizobium medicae WSM419  Bacteria  normal  0.183078  normal  0.160096 
 
 
-
 
NC_011989  Avi_1159  methyl-accepting chemotaxis protein  39.09 
 
 
671 aa  290  5.0000000000000004e-77  Agrobacterium vitis S4  Bacteria  normal  0.573311  n/a   
 
 
-
 
NC_012848  Rleg_5069  methyl-accepting chemotaxis sensory transducer  44.79 
 
 
714 aa  290  6e-77  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.277036  normal 
 
 
-
 
NC_012850  Rleg_0400  methyl-accepting chemotaxis sensory transducer  43.07 
 
 
843 aa  290  8e-77  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.00170819 
 
 
-
 
NC_011369  Rleg2_0368  methyl-accepting chemotaxis sensory transducer  42.79 
 
 
843 aa  289  1e-76  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0662296 
 
 
-
 
NC_009484  Acry_2590  methyl-accepting chemotaxis sensory transducer  47.22 
 
 
642 aa  288  2e-76  Acidiphilium cryptum JF-5  Bacteria  normal  0.156907  n/a   
 
 
-
 
NC_011368  Rleg2_5372  methyl-accepting chemotaxis sensory transducer  43.67 
 
 
627 aa  288  2.9999999999999996e-76  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.756404 
 
 
-
 
NC_011368  Rleg2_5354  methyl-accepting chemotaxis sensory transducer  44.58 
 
 
714 aa  287  4e-76  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.642158  normal  0.0994281 
 
 
-
 
NC_012848  Rleg_4670  methyl-accepting chemotaxis sensory transducer  44.89 
 
 
625 aa  285  2.0000000000000002e-75  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.817515 
 
 
-
 
NC_012848  Rleg_5092  methyl-accepting chemotaxis sensory transducer  42.96 
 
 
626 aa  285  2.0000000000000002e-75  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.359668  normal  0.0114189 
 
 
-
 
NC_010338  Caul_1387  methyl-accepting chemotaxis sensory transducer  47.49 
 
 
615 aa  285  3.0000000000000004e-75  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4811  methyl-accepting chemotaxis sensory transducer  44.79 
 
 
625 aa  285  3.0000000000000004e-75  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.327513  normal 
 
 
-
 
NC_010338  Caul_1640  methyl-accepting chemotaxis sensory transducer  44.55 
 
 
600 aa  284  4.0000000000000003e-75  Caulobacter sp. K31  Bacteria  normal  0.0736059  normal  0.0470065 
 
 
-
 
NC_011989  Avi_0793  methyl-accepting chemotaxis protein  38.54 
 
 
740 aa  284  4.0000000000000003e-75  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3923  methyl-accepting chemotaxis protein  42.68 
 
 
843 aa  283  6.000000000000001e-75  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1201  methyl-accepting chemotaxis protein  39.01 
 
 
728 aa  283  6.000000000000001e-75  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3714  methyl-accepting chemotaxis protein  38.1 
 
 
679 aa  283  1e-74  Agrobacterium vitis S4  Bacteria  normal  0.0885803  n/a   
 
 
-
 
NC_009636  Smed_0082  methyl-accepting chemotaxis sensory transducer  38.65 
 
 
665 aa  282  2e-74  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4686  methyl-accepting chemotaxis sensory transducer  45.15 
 
 
601 aa  281  3e-74  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.115608  normal 
 
 
-
 
NC_011989  Avi_1200  methyl-accepting chemotaxis protein  43.63 
 
 
728 aa  281  5e-74  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_2195  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.55 
 
 
577 aa  280  5e-74  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0980  methyl-accepting chemotaxis protein  38.79 
 
 
611 aa  280  5e-74  Agrobacterium vitis S4  Bacteria  normal  0.442512  n/a   
 
 
-
 
NC_012848  Rleg_5255  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50 
 
 
585 aa  279  1e-73  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.700683  normal 
 
 
-
 
NC_011365  Gdia_0173  methyl-accepting chemotaxis sensory transducer  48.87 
 
 
545 aa  278  2e-73  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.074609 
 
 
-
 
NC_008044  TM1040_0476  methyl-accepting chemotaxis sensory transducer  39.11 
 
 
589 aa  279  2e-73  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1547  methyl-accepting chemotaxis protein  39.45 
 
 
635 aa  278  2e-73  Agrobacterium vitis S4  Bacteria  normal  0.0672502  n/a   
 
 
-
 
NC_011370  Rleg2_6126  methyl-accepting chemotaxis sensory transducer  42.59 
 
 
650 aa  278  2e-73  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.375381  normal  0.0878449 
 
 
-
 
NC_012850  Rleg_0098  methyl-accepting chemotaxis sensory transducer  38.04 
 
 
665 aa  278  2e-73  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.713215  normal 
 
 
-
 
NC_012848  Rleg_4978  methyl-accepting chemotaxis sensory transducer  42.17 
 
 
846 aa  278  3e-73  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.23325  normal 
 
 
-
 
NC_009636  Smed_0305  methyl-accepting chemotaxis sensory transducer  42.21 
 
 
841 aa  278  3e-73  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2464  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.41 
 
 
605 aa  277  5e-73  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5535  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.38 
 
 
591 aa  276  9e-73  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.435889 
 
 
-
 
NC_009484  Acry_2990  methyl-accepting chemotaxis sensory transducer  44.84 
 
 
631 aa  275  3e-72  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3005  methyl-accepting chemotaxis sensory transducer  44.08 
 
 
665 aa  273  7e-72  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0080  methyl-accepting chemotaxis sensory transducer  45.93 
 
 
510 aa  273  7e-72  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_5166  methyl-accepting chemotaxis sensory transducer  38.51 
 
 
669 aa  273  8.000000000000001e-72  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_2387  methyl-accepting chemotaxis sensory transducer  43.36 
 
 
505 aa  273  8.000000000000001e-72  Acidiphilium cryptum JF-5  Bacteria  normal  0.0566767  n/a   
 
 
-
 
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