| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0082 |
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| Symbol | |
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| ID | 5320909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 89239 |
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| End bp | 91236 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789013 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001325777 |
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| Protein GI | 150395310 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAC GCGGGAAAAT TAACTTGATC GTCGGCATCA TGAGTCTGCT GGCGATAGCG
ATCACCGGTA TGTCGTTGCT TATCGTGAGC GAGTACAACC AGCGGCTCGG TGAATACCAG
AACGCTTCCG ACCGGGCCTT CAAAGGCGAG CGGCTCAATC GTCTCGTAAC GGCCGTGGTC
ATGGAGGCGC GGGGCATCTA TGCGGCGCCG ACGGTTGAAA AGGCAAAGCC ATTTGCCGAG
GGCATTCTCA AAAATCTCGG CAAGATAGAT ACGCTGCTGG AGGAGTGGCG GCCGCTGGTG
CCGGCCGACG TCCTGCCCGC CTTCGATACC CTCGTAAAGC GCGCGGAGGA ATTCAAGGTG
TTCCGAAGTG AGACGGCGCG CCTGGGCACG GAAGTTGCGC CGCAGGCGGC CAACGAGCAG
GGCAACAATG AAGCCAATCG GGCCAACCGC AAGGCTTTTC AAGCTGAGAT CGACGTCGTC
GTGGACGCGA ACCTTGCCTT GCTTCAGACG ATTACCGCCG ACATCGCCGA ATACAAGCGC
TCGATCGTGC TGATCGTGCT TGCAACCGCA GCTCTTGGCA TGCTGGCCGG GATCGGCGCT
GCCTTCTACA TTGCGACCAA CCACCTCAGC CGCCCGATTC TCGATCTGAC GGCCAAGATG
AAGGTGCTTG CCGGCGGTGA CCTCACGGCG GATGTGCCCT TCGCCGGGCG CAAGGACGAG
ATCGGCGATA TGGCGGCAGC GGTCGAAGTC TTCAAACAGA ACAGCCTTGC CGTTCGAGAG
CTCAACGCCC AGGAAGAAGT CCTGCGTGGA AAGAGCGCGG ACCTGCAGTC GAGCATCGCC
ACGGTCGTCG CGGCGGCTGC GGCGGGCGAT TTCACCCAGC GCATCAGCAA GGACTATGAC
AACGACGATC TCAACCGTTT TGCGGCAAGC GTCAACGAAC TGGTCAACAG TGTCGATACC
GGTATTGCCG AGACCCGAAG GGTCATTGCG AGCCTGGCAA CGGGCGACCT AACGCAGAGC
ATGAAGGGTC AGTTCCAGGG CGCATTCGCG GAGCTGCAGA CGAACGTCAA CGACACCTTG
CAGACGCTTC AGAAGACGCT CCGCGAGGTC CGCACGACGA CGGACTCGAT CAATGGAAAC
TCTACCGAGC TGCGCAGTGC TGCCGACGAC CTTTCCAAGC GGACGGAACA GCAGGCCGCG
GCGCTTGAGG AAACCTCGGC AGCGCTCGAC CAGATAACCG CCGCAGTCCG CAATTCGACC
GAACGGGCTC ATGAGGCGAC CGTGATGGTT ACGGAGGCGA AGGACAGTGC TGCGCAGTCG
GCATCGGTCG TCCGCAATGC CATCGATGCC ATGGGCCGGA TCGAACAGGC TTCGAGCGAG
ATCGGCCAGA TTACCAACGT CATCGACGAA ATTGCCTTCC AGACCAACCT GCTGGCCCTG
AACGCAGGCG TCGAGGCGGC ACGCGCCGGA GATGCCGGCA AGGGTTTCGC CGTCGTCGCC
CAGGAGGTCC GTGAACTCGC CCAGCGTGCC GCCAGCGCCG CCAAGGATAT CAAATCGCTG
ATTTCCAAGT CCGGTGACGA GGTGTCAACC GGCGTCAAGC TCGTACAGGC AACGGGAGCG
GCGCTCGGCC AGATCGAGAC GCGCGTCCTC AAGATCAACG ATCACATCCA TTCGATCGCG
ACGGCCGCGC GTGAGCAATC GACGGGCCTT GGCGAAGTCA GCACTGCCGT CAACCAGATG
GATCAGGTCA CCCAGCGCAA TGCCGCCATG GTGGAAGAGG CGAATGCTGC CACGCATAAG
CTATCCGCTG AAGCTGACAA CCTTGCCAAC CTGATCGCCT ATTTCAAGAT CGAGCGCGAC
CCGGTGCGTA CGATCACGCC GGCAAGGGAA ACGAACCGCC CCGTTGCATC GCCCGCCCGC
CGTATGATGG GGTCGGTCGC GCGCGCTTTC GGCAACGGTT CCGCCGCGGT CGCCCGTGAT
GATTGGGAGG AATTCTGA
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| Protein sequence | MKIRGKINLI VGIMSLLAIA ITGMSLLIVS EYNQRLGEYQ NASDRAFKGE RLNRLVTAVV
MEARGIYAAP TVEKAKPFAE GILKNLGKID TLLEEWRPLV PADVLPAFDT LVKRAEEFKV
FRSETARLGT EVAPQAANEQ GNNEANRANR KAFQAEIDVV VDANLALLQT ITADIAEYKR
SIVLIVLATA ALGMLAGIGA AFYIATNHLS RPILDLTAKM KVLAGGDLTA DVPFAGRKDE
IGDMAAAVEV FKQNSLAVRE LNAQEEVLRG KSADLQSSIA TVVAAAAAGD FTQRISKDYD
NDDLNRFAAS VNELVNSVDT GIAETRRVIA SLATGDLTQS MKGQFQGAFA ELQTNVNDTL
QTLQKTLREV RTTTDSINGN STELRSAADD LSKRTEQQAA ALEETSAALD QITAAVRNST
ERAHEATVMV TEAKDSAAQS ASVVRNAIDA MGRIEQASSE IGQITNVIDE IAFQTNLLAL
NAGVEAARAG DAGKGFAVVA QEVRELAQRA ASAAKDIKSL ISKSGDEVST GVKLVQATGA
ALGQIETRVL KINDHIHSIA TAAREQSTGL GEVSTAVNQM DQVTQRNAAM VEEANAATHK
LSAEADNLAN LIAYFKIERD PVRTITPARE TNRPVASPAR RMMGSVARAF GNGSAAVARD
DWEEF
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