Gene Avi_0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0806 
SymbolmclA 
ID7386297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp691473 
End bp694001 
Gene Length2529 bp 
Protein Length842 aa 
Translation table11 
GC content61% 
IMG OID643650368 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_002548578 
Protein GI222147621 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTATTTG ATCGTCTACT TTCTCGGTGC AAGATTCAGA CCAAGGTTCT GGTCTTCATC 
GTTCCGTTTG TTCTCAGTAT TTCGGCCGTT GGTCTGACCG GCTACTACGC ATCGCGTATC
CTGCAAGGGC AGATGGAAGT CACCAATAGT GTGGTCAACA CGCTGAGTGG TTTCAAGAAT
GTCTATGCGG CGATGACGGC TTTTCTGCAA AAGACCACGG ATGCATCGAA AACGGCGCTG
GATCAGGAGC TGGATGCACA GTTGACGAGT TTGAAGGCCA TGCGCATCTC GCTTGACGGT
CTGGGCGGAG CAGCCCAGGT CGATGCGGCG ATTGCCGGAA CGGAATCGAT TGCCGGTCAG
GTCAAGCGCC TGTGGGATTT GGATCATGGC GCGGCGGATC TGCGTGCAGC CCTGGAGGCC
GATACCCAGC AACTGTCCAG CCAGCAGAGC GATCTGCTCA CCTATTCCAC CCATGTCCGT
GAGGCGCTGG CCAAGGATGA AAGCCAGGCC AAGACCATGC TGCGCGATTC CGACCGGTTG
ACGCGCGGCG CCAACCTGAT TGCCGATCTG GTCACAGACT TCAACAGCGC CACCGCCCCG
GAGGCGAAGA TGGAGCTGGT CAAGACGCGG ATGCCGGAGC TGAAAAAGGC CGTTGCCGAT
ATTGCCGCCG CGCTGCCAGC GGAACAGGCC GTGCTGGGCA CATCGCTGAC CGACAATATT
CAGCAGTTGG CCGCCCAGAT CGAGATCGGT GTGATCAATG ACACGACAGT CAGTGCGACT
GAACAGGCGA TCAACCTGAT GCGGCCGGTG TCCATCCGCT TGCAGGGGGC GTCTACTCTC
AAATCCCGGC AGGCGACGGC AGTGTTTGGT ACCCTTGATC AGCCGATTGC CGAATCGACC
GCTTTGCTCA CTGCCACACG TCAGCTGGTG GATATCAGCA ATGGGGTTGA ACTGCGCAGT
TCACGCTTCA TGGCGGCAGC ATCGGCGGAT GGCCTGCAAA AATTGCAGGC GTCGCTCGGC
ACACTGAAAC GCCGTGCCGC AGCCATGGCC AAGGACCCCA ATGTTAGCGC CGACATCAAG
GCAAAGCTGT CGCAGATCGC CCCATTGACC GACGCTATGG CCGATAAGGC GACCCGGCTG
GTGGCCATGG ATGGCCAGAA AACCGCCGCC TTCCTGGCCG CTGCCCGGGA TATCGACACC
ATCTGGTCGC AACTGAGCGA TTTTGCCGCC TCCCAGCGCC AGGTGGCCGA TGAACAGAGC
GCCTCTGCCG ATACCATGTC GGCGCTGGCT CTGCTGGCTG GTGTCGTTAT CGCCATTGTC
GCTGGTATCG GCCTGATCGC CACCTTCAAG GGGCCGATCA ATCAGATCAC CGCTGCCATG
CGCCGCCTGG CATCCGGCGA TCTCGAGATC GAGATTGCTG GCGGCACGCG CCCTGATGAG
ATCGGCGATA TGGCCCGCGC CCTTGGCGTG TTCAAGGACA ATGCCGAAGC AAAGATTCGC
GCCGAGGCCG AGGGGGCGCG GGTTCGCGCT GAAAGCGAAG CCGAGCGCGC CCGCAATGAT
GCTGAAAAGC AGCAGGCCGA CCAGGACGTG CAATTTGCGG TGACGGAACT GGCCGCCGGG
CTGGAGCGCC TCGCCAATGG CGATGTCTCC GCCACGCTGG ACCATCCCTT TGCCGGGCGC
ATGGAACAGT TGCGCAGTGA CTTCAACCGC TCGCTGACCC GGTTGAAGGA AACCATCGGC
CTGATCCAGG GCAATGTCAC GGCCATTCAG GGCAATGTGC AGCAAATGGC CCATTCCACC
GACGATCTGT CGCGCCGCAC GGAAACCCAG GCTGCCTCGC TGGAGGAAAC CGCCGCTGCC
GTCAACGAAG TCACCTCCAA TGTTCGCCAG GCCGCCGACA GGGCGCGTGA GGTCAATGAC
ATCGTGGGCG AAACCCGGGG GAATGCCGAG AAATCGGCTG TCGTGGTCGG CAATGCCGTC
TCCGCCATGG CCCGGATCGA GGATGCCTCA AAGAAGATCG AGCAGATCAT CAGCGTCATC
GAGGAAATCG CCTTCCAGAC CAATCTTCTG GCGCTGAATG CCGGTGTCGA GGCCGCCCGT
GCGGGCGAGG CGGGCAAGGG CTTTGCCGTC GTTGCCCAGG AAGTGCGCGA ACTTGCGCAA
CGTTCTGGCC GCGCCGCAAA AGACATCAAG GCGCTGATCA ACACCTCCAC CGAAGAGGTT
AATGCCGGGG CGAGACTGGT GCAGGAAACC GGTGCGGCGC TGACCGTCAT CAGCCAGCAA
ATCGCCACGA TCAGCACGCA TGTTGAAGGC ATCGCTAGCA CCAGCCGCGA CCAATCGGCA
GCCCTTGGCG AAGTCAACAG CGCCGTCGGC CAGATGGACA GTCTGACCCA GCAAAACGCC
GCCATGGTCG AAGAAACCTC CGCCGCCAGC CGCATGTTGG CCGACGAGGC GGATCAACTG
GTGGGTCTGT TGCAGCAGTT CAAGCTGGAA AGCGGGACGC AGGCCGGGCG GTGGGACCGG
GCGGCTTGA
 
Protein sequence
MLFDRLLSRC KIQTKVLVFI VPFVLSISAV GLTGYYASRI LQGQMEVTNS VVNTLSGFKN 
VYAAMTAFLQ KTTDASKTAL DQELDAQLTS LKAMRISLDG LGGAAQVDAA IAGTESIAGQ
VKRLWDLDHG AADLRAALEA DTQQLSSQQS DLLTYSTHVR EALAKDESQA KTMLRDSDRL
TRGANLIADL VTDFNSATAP EAKMELVKTR MPELKKAVAD IAAALPAEQA VLGTSLTDNI
QQLAAQIEIG VINDTTVSAT EQAINLMRPV SIRLQGASTL KSRQATAVFG TLDQPIAEST
ALLTATRQLV DISNGVELRS SRFMAAASAD GLQKLQASLG TLKRRAAAMA KDPNVSADIK
AKLSQIAPLT DAMADKATRL VAMDGQKTAA FLAAARDIDT IWSQLSDFAA SQRQVADEQS
ASADTMSALA LLAGVVIAIV AGIGLIATFK GPINQITAAM RRLASGDLEI EIAGGTRPDE
IGDMARALGV FKDNAEAKIR AEAEGARVRA ESEAERARND AEKQQADQDV QFAVTELAAG
LERLANGDVS ATLDHPFAGR MEQLRSDFNR SLTRLKETIG LIQGNVTAIQ GNVQQMAHST
DDLSRRTETQ AASLEETAAA VNEVTSNVRQ AADRAREVND IVGETRGNAE KSAVVVGNAV
SAMARIEDAS KKIEQIISVI EEIAFQTNLL ALNAGVEAAR AGEAGKGFAV VAQEVRELAQ
RSGRAAKDIK ALINTSTEEV NAGARLVQET GAALTVISQQ IATISTHVEG IASTSRDQSA
ALGEVNSAVG QMDSLTQQNA AMVEETSAAS RMLADEADQL VGLLQQFKLE SGTQAGRWDR
AA