Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0806 |
Symbol | mclA |
ID | 7386297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 691473 |
End bp | 694001 |
Gene Length | 2529 bp |
Protein Length | 842 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643650368 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_002548578 |
Protein GI | 222147621 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTATTTG ATCGTCTACT TTCTCGGTGC AAGATTCAGA CCAAGGTTCT GGTCTTCATC GTTCCGTTTG TTCTCAGTAT TTCGGCCGTT GGTCTGACCG GCTACTACGC ATCGCGTATC CTGCAAGGGC AGATGGAAGT CACCAATAGT GTGGTCAACA CGCTGAGTGG TTTCAAGAAT GTCTATGCGG CGATGACGGC TTTTCTGCAA AAGACCACGG ATGCATCGAA AACGGCGCTG GATCAGGAGC TGGATGCACA GTTGACGAGT TTGAAGGCCA TGCGCATCTC GCTTGACGGT CTGGGCGGAG CAGCCCAGGT CGATGCGGCG ATTGCCGGAA CGGAATCGAT TGCCGGTCAG GTCAAGCGCC TGTGGGATTT GGATCATGGC GCGGCGGATC TGCGTGCAGC CCTGGAGGCC GATACCCAGC AACTGTCCAG CCAGCAGAGC GATCTGCTCA CCTATTCCAC CCATGTCCGT GAGGCGCTGG CCAAGGATGA AAGCCAGGCC AAGACCATGC TGCGCGATTC CGACCGGTTG ACGCGCGGCG CCAACCTGAT TGCCGATCTG GTCACAGACT TCAACAGCGC CACCGCCCCG GAGGCGAAGA TGGAGCTGGT CAAGACGCGG ATGCCGGAGC TGAAAAAGGC CGTTGCCGAT ATTGCCGCCG CGCTGCCAGC GGAACAGGCC GTGCTGGGCA CATCGCTGAC CGACAATATT CAGCAGTTGG CCGCCCAGAT CGAGATCGGT GTGATCAATG ACACGACAGT CAGTGCGACT GAACAGGCGA TCAACCTGAT GCGGCCGGTG TCCATCCGCT TGCAGGGGGC GTCTACTCTC AAATCCCGGC AGGCGACGGC AGTGTTTGGT ACCCTTGATC AGCCGATTGC CGAATCGACC GCTTTGCTCA CTGCCACACG TCAGCTGGTG GATATCAGCA ATGGGGTTGA ACTGCGCAGT TCACGCTTCA TGGCGGCAGC ATCGGCGGAT GGCCTGCAAA AATTGCAGGC GTCGCTCGGC ACACTGAAAC GCCGTGCCGC AGCCATGGCC AAGGACCCCA ATGTTAGCGC CGACATCAAG GCAAAGCTGT CGCAGATCGC CCCATTGACC GACGCTATGG CCGATAAGGC GACCCGGCTG GTGGCCATGG ATGGCCAGAA AACCGCCGCC TTCCTGGCCG CTGCCCGGGA TATCGACACC ATCTGGTCGC AACTGAGCGA TTTTGCCGCC TCCCAGCGCC AGGTGGCCGA TGAACAGAGC GCCTCTGCCG ATACCATGTC GGCGCTGGCT CTGCTGGCTG GTGTCGTTAT CGCCATTGTC GCTGGTATCG GCCTGATCGC CACCTTCAAG GGGCCGATCA ATCAGATCAC CGCTGCCATG CGCCGCCTGG CATCCGGCGA TCTCGAGATC GAGATTGCTG GCGGCACGCG CCCTGATGAG ATCGGCGATA TGGCCCGCGC CCTTGGCGTG TTCAAGGACA ATGCCGAAGC AAAGATTCGC GCCGAGGCCG AGGGGGCGCG GGTTCGCGCT GAAAGCGAAG CCGAGCGCGC CCGCAATGAT GCTGAAAAGC AGCAGGCCGA CCAGGACGTG CAATTTGCGG TGACGGAACT GGCCGCCGGG CTGGAGCGCC TCGCCAATGG CGATGTCTCC GCCACGCTGG ACCATCCCTT TGCCGGGCGC ATGGAACAGT TGCGCAGTGA CTTCAACCGC TCGCTGACCC GGTTGAAGGA AACCATCGGC CTGATCCAGG GCAATGTCAC GGCCATTCAG GGCAATGTGC AGCAAATGGC CCATTCCACC GACGATCTGT CGCGCCGCAC GGAAACCCAG GCTGCCTCGC TGGAGGAAAC CGCCGCTGCC GTCAACGAAG TCACCTCCAA TGTTCGCCAG GCCGCCGACA GGGCGCGTGA GGTCAATGAC ATCGTGGGCG AAACCCGGGG GAATGCCGAG AAATCGGCTG TCGTGGTCGG CAATGCCGTC TCCGCCATGG CCCGGATCGA GGATGCCTCA AAGAAGATCG AGCAGATCAT CAGCGTCATC GAGGAAATCG CCTTCCAGAC CAATCTTCTG GCGCTGAATG CCGGTGTCGA GGCCGCCCGT GCGGGCGAGG CGGGCAAGGG CTTTGCCGTC GTTGCCCAGG AAGTGCGCGA ACTTGCGCAA CGTTCTGGCC GCGCCGCAAA AGACATCAAG GCGCTGATCA ACACCTCCAC CGAAGAGGTT AATGCCGGGG CGAGACTGGT GCAGGAAACC GGTGCGGCGC TGACCGTCAT CAGCCAGCAA ATCGCCACGA TCAGCACGCA TGTTGAAGGC ATCGCTAGCA CCAGCCGCGA CCAATCGGCA GCCCTTGGCG AAGTCAACAG CGCCGTCGGC CAGATGGACA GTCTGACCCA GCAAAACGCC GCCATGGTCG AAGAAACCTC CGCCGCCAGC CGCATGTTGG CCGACGAGGC GGATCAACTG GTGGGTCTGT TGCAGCAGTT CAAGCTGGAA AGCGGGACGC AGGCCGGGCG GTGGGACCGG GCGGCTTGA
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Protein sequence | MLFDRLLSRC KIQTKVLVFI VPFVLSISAV GLTGYYASRI LQGQMEVTNS VVNTLSGFKN VYAAMTAFLQ KTTDASKTAL DQELDAQLTS LKAMRISLDG LGGAAQVDAA IAGTESIAGQ VKRLWDLDHG AADLRAALEA DTQQLSSQQS DLLTYSTHVR EALAKDESQA KTMLRDSDRL TRGANLIADL VTDFNSATAP EAKMELVKTR MPELKKAVAD IAAALPAEQA VLGTSLTDNI QQLAAQIEIG VINDTTVSAT EQAINLMRPV SIRLQGASTL KSRQATAVFG TLDQPIAEST ALLTATRQLV DISNGVELRS SRFMAAASAD GLQKLQASLG TLKRRAAAMA KDPNVSADIK AKLSQIAPLT DAMADKATRL VAMDGQKTAA FLAAARDIDT IWSQLSDFAA SQRQVADEQS ASADTMSALA LLAGVVIAIV AGIGLIATFK GPINQITAAM RRLASGDLEI EIAGGTRPDE IGDMARALGV FKDNAEAKIR AEAEGARVRA ESEAERARND AEKQQADQDV QFAVTELAAG LERLANGDVS ATLDHPFAGR MEQLRSDFNR SLTRLKETIG LIQGNVTAIQ GNVQQMAHST DDLSRRTETQ AASLEETAAA VNEVTSNVRQ AADRAREVND IVGETRGNAE KSAVVVGNAV SAMARIEDAS KKIEQIISVI EEIAFQTNLL ALNAGVEAAR AGEAGKGFAV VAQEVRELAQ RSGRAAKDIK ALINTSTEEV NAGARLVQET GAALTVISQQ IATISTHVEG IASTSRDQSA ALGEVNSAVG QMDSLTQQNA AMVEETSAAS RMLADEADQL VGLLQQFKLE SGTQAGRWDR AA
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