| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9088 |
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| Symbol | mcpC |
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| ID | 7367810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | + |
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| Start bp | 60362 |
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| End bp | 62647 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643644302 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002542599 |
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| Protein GI | 222083196 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATC ACACAGTTAG GCGGCCATTA TGGATTCAGA TTACTGGTTA CGGGTTTGCC
GCGGTTATGT TTGCCAGTGC TGCAATCGGC GGCCTTGCCT GGCACGCGCA ATCGACGATG
AACGACACTG CGGTAAAAAG CAAAACCGCA AGCGACCTCG CCGTCATCCA GGCCGAAATG
GCCGCCATTT CGAGATCGGC AGCAGCGCTT GCCTCCTCCG TCGCCAATGA TCCCGGTACG
GTACAAATGA TCGCAAACGG CGACCGCGAG GGTCTGCTGA CCAAATACCA GCCCGGCATG
GCGGCGGTTG CCAAGGAAGG CGCTTTGCAA ACCTTCACTT TCCTTGACGT GACCGGAACG
GTCGTGGCCC GGTCGCATTC GCCTGCGAAA TTCGGCGACA TGATTATCGG CAGACGGCAG
ACGGTGGCTT CGGCGATAAA CACCGGTAAA CTCTCCGCTG GCATCGAACA AGGTCGCACG
GCCATCAATA CCAGCGCTAC AGCGCCCGTG ATCCGGGACG GCAAGGTCAT CGGTGCGATC
GACGTGGGCA CAGAACTCAG CAACGCCTTC TTCGGCCCAA TTGCCGACCG CCTCGGCGCG
GAAATTGCCG TGGACGTGCT GGTAGAAGGC AAGGTGCAAA CCCAGGCTTC GACGCAGGGG
GACAAGAGCA TTCTTGCGGA AGAGCAGATC AGGGCGGCCC TCGATGGCAA GCCGGTGACG
GCGGGCGTTA CACTCGACGG CCGCGACATG ATCATCAACG CTATTCCCTT CAACAATTTT
GGCGGCGCCA AGCTCGGCGT CATTGAACTT GCCACCGATG CAACGACGAT TCTTGCCGAT
GGTCGTCAGT CGACGCTGAA CTCGATTGGC GCTTCCGTTC TGGTGTCGCT GCTCTCGCTG
TTCGGTTTCC TATTCTTCGC CCGTGCGCTG GGTGGAGCGA TTTCCCGGCT GACCGGGACG
ATGACACGGC TCGCCACGGG CGATCTGTCG GCCAGTGTCG AAGGCGGTCG TCGCCCCGAC
GAAATTGGCG CAATGGCCCG CGCGGTCGAC GTGTTCAAGG AAAACAGCTT AAAGGCGCGC
GAGCTGGAGC GGCAGGCGGA AGAAAACCGC AGCCTCAGCG AGGAACAGCG TCAGCGCAGC
GCCGAACAAG AGCGCAGCCG TTCGCAGGCC ATGGCGGAAG CGACCAGCGG CCTTGCTACC
GGCCTGAAGC ATCTGTCCGA GGGCGACCTG GCATACCAGC TCGACCGTGC ATTCGTGGCC
GACTTCGAAC CGCTGCGCGC CGACTTCAAT GCCGCCGTCA GCCAGTTGCG CGGCACGCTC
ATTTCGTTTG CGCAGGCCAC CAGCTCGATC GACAGCGGCT CGCGTGAAGT CAGTCAGAGT
GCCGACGATC TGGCCAAGCG GACAGAACAG CAGGCCGCCT CACTGGAGGA GACAGCCGCC
GCCCTCGACC AGATCACTGT CAATGTCGCG AGCTCCTCCA AGCGAACCGA AGATGCCCGT
ACCGTCGCCA TCCAGGCCAA TGAAAGCGCC CGCCATTCTG GTGCTGTCGT TGCCAATGCC
GTCGACGCGA TGGGCCGCAT TGAGCAGTCG TCGGGCCAGA TCTCGAACAT CATCGGCGTT
ATCGACGACA TCGCCTTTCA GACCAATCTT CTGGCGCTGA ACGCCGGCGT CGAGGCAGCC
CGGGCCGGCG AAGCAGGCAA GGGTTTTGCT GTCGTCGCCC AAGAGGTGCG CGAACTTGCC
CAGCGTTCCG CCAAAGCCGC CAAGGAGATC AAGGACCTGA TCGGCAAGTC ATCGGTGGAA
GTCGGGACCG GAGTCAAGCT GGTTAGCGAA ACCGGCGACG CGCTGCGCAA GATCGAGACC
TATATCGTCA CCATCAACCA GCACATGGAT GCGATCGCCA CATCCTCGCG CGAGCAGTCG
GTCGGCCTGG CGGAGGTCAA CACGGCCGTC AACCAGATGG ACCAGGTGAC GCAGCAGAAT
GCCGCGATGG TGGAAGAAGC CAATGCGGCC GGCGCTACGC TTGCCAACGA AGCCGGCCGC
CTGCGCGAAC TGATCAGCCA GTTCCAGCTC GGCCATGAAC ACGCGGTTTC GCGGCAGGAC
CCCGCGCCGC GCCGGGCAGC CCCGGTTACG GCAGTTTCCG GTCGCCCGTG GGCGTCGGCT
TCAGCACCCT CGGTGCCGGC AGACTCGCCG GCACGCGGCA TGGTCAGCAA GATCGCAAAG
GCATTTGGCG GCGGGCAAAG CCGTGTTGCA GCAGCGCCAT CGACGGACAG CTGGGAAGAG
TTCTGA
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| Protein sequence | MSDHTVRRPL WIQITGYGFA AVMFASAAIG GLAWHAQSTM NDTAVKSKTA SDLAVIQAEM
AAISRSAAAL ASSVANDPGT VQMIANGDRE GLLTKYQPGM AAVAKEGALQ TFTFLDVTGT
VVARSHSPAK FGDMIIGRRQ TVASAINTGK LSAGIEQGRT AINTSATAPV IRDGKVIGAI
DVGTELSNAF FGPIADRLGA EIAVDVLVEG KVQTQASTQG DKSILAEEQI RAALDGKPVT
AGVTLDGRDM IINAIPFNNF GGAKLGVIEL ATDATTILAD GRQSTLNSIG ASVLVSLLSL
FGFLFFARAL GGAISRLTGT MTRLATGDLS ASVEGGRRPD EIGAMARAVD VFKENSLKAR
ELERQAEENR SLSEEQRQRS AEQERSRSQA MAEATSGLAT GLKHLSEGDL AYQLDRAFVA
DFEPLRADFN AAVSQLRGTL ISFAQATSSI DSGSREVSQS ADDLAKRTEQ QAASLEETAA
ALDQITVNVA SSSKRTEDAR TVAIQANESA RHSGAVVANA VDAMGRIEQS SGQISNIIGV
IDDIAFQTNL LALNAGVEAA RAGEAGKGFA VVAQEVRELA QRSAKAAKEI KDLIGKSSVE
VGTGVKLVSE TGDALRKIET YIVTINQHMD AIATSSREQS VGLAEVNTAV NQMDQVTQQN
AAMVEEANAA GATLANEAGR LRELISQFQL GHEHAVSRQD PAPRRAAPVT AVSGRPWASA
SAPSVPADSP ARGMVSKIAK AFGGGQSRVA AAPSTDSWEE F
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