Gene Dvul_0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0230 
Symbol 
ID4662641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp281207 
End bp284098 
Gene Length2892 bp 
Protein Length963 aa 
Translation table11 
GC content65% 
IMG OID639818426 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_965681 
Protein GI120601281 
COG category[N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein
[COG2703] Hemerythrin 
TIGRFAM ID[TIGR02481] hemerythrin-like metal-binding domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCA AGCGCAAGCT CATGGTCGGA TTCATCCTTG CCCTGTTCGT GACCTGCACT 
CTCATGGCCG GAGTCAACTG GCACTTCGCC CACGACGGCA TGAACGGCAT CGGCGACACT
GCAGTGGAAG CCATGAAGGA CAGGGCACGC GGGCAGCTTG AGAGCATTCG CAGCGCCAAG
GCCCTGCACA TCGAAGACCT GTTCCAACGC ATCCGCAACC AGACACGCAC GCTGGCAGAG
AGTCTCACCG TCCGTGAGGC CGCAACGACA CTGAGTGCGG CCTATTTCAC GGTGCAAGGC
GAGACCACTG GCGCGCTCGA CGCCAAGGCA CTGCGAGGCA AGCTGACCGA GGACTATGCC
GGGGCGAACT ATCTCGCCAA CCCGACCTTC GCCACCCATG CCCGCACCGC GAAGGGCTAC
GCCCCCCGTC CTGCGGAAAC GTACCTGCCG AAAGATGCCA ACGGCATCAT CCTGCAGGCG
ATGTACGTGC ACCCTTCGGG CAACCCCAAC CCGCTGGGCG AAAAGCACCG CCTCGACGCC
AACCCGCTGG CGTCCACCTA CAACACCCTG CACCGCAAGT ACCATCCCAT ACTGCGCAAC
TATCTGACGA CGTTCGGCTA CTACGACATC TTCATCATCG ATGCCGCCAG CGGCGTCATC
GTCTATACGG TCTTCAAGGA GAAGGACTAC GCCACCTCAC TGCTGACGGG CCCCTACCGC
GACACGGGGC TGGGCGCGGT CTTTCGCGAG GCGGTGGAGA ACGGACGCAA GGGACGGCGC
GACGCCGTAT CCATCTCCGA CTTCGCCCCC TACGAACCCA GCTACAACGC TCCGGCGGCC
TTCATAGCCG CACCGGTCTT CGACGACCGG GGAACATGTC AGGCCGTGCT GGCCTTCCAG
ATGCCCGTGG ACAACATCGA CCGCATCATG ACCTCGAACG GACGCTGGCA GGAGGTGGGG
CTTGGCACCA CGGGTGAGAC CTACCTCGTG GGCCCCGACA TGCACCCGCG TTCGAAGCTG
CGCGCCGCCT CCGGGGCATC GGACGAGGTC GTCGTCGACA GCGAGGCGGC ACGCAAGGCC
CTCGGTGGCG AGTCGGGCAC GGCCACCATC AGGGACTACC GCGGCAAGAA CGTCCTCGCG
GCATGGCAGC CACTGCGTCT GGAAGGTCTC CACTACGGCC TCATCGCCGA AATCGACATC
GACGAGGCCC TCCTTGCCAC CAGCAAGATA ACCGCCGCAC GGCAGGGTGC CGAAGCGCGC
ACGCTCTGGG GCACGCTACT GGTGCTCGCC CTCGGCACGC TGCTCGGGTC GGGCATCGCC
ATAGCGCTGG TGGGCGCTCT CTCCAGACCG CTTCAACGGC TACAGGTCTA CGCGGGGGAC
GTGGCCGCGG GCAACCTCGA CGCGCGCCCC GAAGGGCAGT ACCCGGCCGA ACTCGACGCC
ATGCGCCACT CCATCGAGAG CATGGTGCAG AACCTGCGTA TGCGCATCCA TGAGGCCGAC
GCCAAGGGCA TGGAAGCCGC CGACAGCGCA CAGGCGGCAC AGGCCGCACT GGACAAGGCC
CGGGCATCCG AAACCCGCAT CAAGGGCCTC ATGGAACGCA TGACCGGGGC GGCAGGCAAG
GCCCGCAGCG TGTCGGAACA CGTCTCACGT TCCATCAACG ACCTCACCGC GCAGGTGCAC
ACCATCACGC AGGGCGTCGA GACGCAGCGC CACCGCATGG ACGACACGGC GCAAGCCATG
GATACCATGC GCACCATGGT CTCCGATGTG GCTGACAATG CCCGGCGGGC GGCGGAACAG
GCCGACCTTT CACGTGGGCA CGCGCAGCAG GGTGCCTCGG GAGTGGGCGA GGCCGTGGCC
TCCATCGGTC AGGTCCGCGA ACGCATCGAA CGCCTCAACA CCGCCATGGC CCGCCTCGGT
GAAGAGGCCG ACAGCATCGG CAAGGTCATG TCCGTCATCT CCGACATCGC CGACCAGACC
AACCTGCTGG CCCTCAACGC AGCCATCGAG GCGGCAAGGG CGGGGGACGC CGGGCGCGGG
TTCGCCGTGG TGGCCGACGA AGTGCGCAAA CTCGCAGAGA AGACCATGCA GGCGACAGGC
GAGGTCGGCA GTGCCGTCAC GCGCATACAG ACCCACACCC GAGACAACAT CGCCGCTGTT
GAGACAGCCA TGCGCGAAGC CACAGCGTCG GCGGACGCGG CGACGGCATC GGGCCGGGTC
ATGGACGACA TCGTCTCCCG CGTGGACGAG ACGGCGGGCA TGGTGCAGTC CATCGCCGCA
GCCAGCGACC AGCAGGCCGC GGCCGCGACC ATGGTGGGGC GCAACGTGGA GGAGGTGAAC
GCCATCGCAG GTGACACGGC CGCCTCCATG AGCCACTTCG CAGGCACACT GGAGGACATC
TTCTCGCAAG TACAGGAACT GTTCTCCATG ATCGAGGTCA TCAGCACCGG CGAAGAGGGG
GTCTCGGTAC TGGCTGACAC GGGCAACGCG GATGTGCTCG TGAAGTGGTC CGAAGACCTC
GCCAACCTGC CGAGTATCGA CGTGCAACAC AAACGGCTCG TGGAGTACAT CAACGACCTC
TACCGCGCTG CGCGCCTCAG GGACATGGGC AAGGCCCGCG CGGTGTTCGA CGCACTCAAG
AACTACGCCG TAGAGCATTT CGGGTACGAG GAAAGGCTCT TCGACGACTA TGCCTACCCC
GAGACGGCAC GGCACAAGGA GATACATCGC CGCTTCGTCG AGACCGTTCT CAAGTGGGAG
AAGCAACTGG CTGCGGGAGA CCCCGAGGTG GTGATGACCA CCCTGCGGGG CCTCGTCGAC
TGGCTGGTGA ACCATATCAT GAAGGAGGAC AAGAAGTACG AGGCCTACTT GCGCGAACGC
GGAGTCTCCT GA
 
Protein sequence
MTLKRKLMVG FILALFVTCT LMAGVNWHFA HDGMNGIGDT AVEAMKDRAR GQLESIRSAK 
ALHIEDLFQR IRNQTRTLAE SLTVREAATT LSAAYFTVQG ETTGALDAKA LRGKLTEDYA
GANYLANPTF ATHARTAKGY APRPAETYLP KDANGIILQA MYVHPSGNPN PLGEKHRLDA
NPLASTYNTL HRKYHPILRN YLTTFGYYDI FIIDAASGVI VYTVFKEKDY ATSLLTGPYR
DTGLGAVFRE AVENGRKGRR DAVSISDFAP YEPSYNAPAA FIAAPVFDDR GTCQAVLAFQ
MPVDNIDRIM TSNGRWQEVG LGTTGETYLV GPDMHPRSKL RAASGASDEV VVDSEAARKA
LGGESGTATI RDYRGKNVLA AWQPLRLEGL HYGLIAEIDI DEALLATSKI TAARQGAEAR
TLWGTLLVLA LGTLLGSGIA IALVGALSRP LQRLQVYAGD VAAGNLDARP EGQYPAELDA
MRHSIESMVQ NLRMRIHEAD AKGMEAADSA QAAQAALDKA RASETRIKGL MERMTGAAGK
ARSVSEHVSR SINDLTAQVH TITQGVETQR HRMDDTAQAM DTMRTMVSDV ADNARRAAEQ
ADLSRGHAQQ GASGVGEAVA SIGQVRERIE RLNTAMARLG EEADSIGKVM SVISDIADQT
NLLALNAAIE AARAGDAGRG FAVVADEVRK LAEKTMQATG EVGSAVTRIQ THTRDNIAAV
ETAMREATAS ADAATASGRV MDDIVSRVDE TAGMVQSIAA ASDQQAAAAT MVGRNVEEVN
AIAGDTAASM SHFAGTLEDI FSQVQELFSM IEVISTGEEG VSVLADTGNA DVLVKWSEDL
ANLPSIDVQH KRLVEYINDL YRAARLRDMG KARAVFDALK NYAVEHFGYE ERLFDDYAYP
ETARHKEIHR RFVETVLKWE KQLAAGDPEV VMTTLRGLVD WLVNHIMKED KKYEAYLRER
GVS