More than 300 homologs were found in PanDaTox collection
for query gene PXO_00041 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  54.15 
 
 
740 aa  685    Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  69.15 
 
 
753 aa  993    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  64.06 
 
 
755 aa  681    Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  70.72 
 
 
733 aa  1011    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  100 
 
 
752 aa  1509    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  72.82 
 
 
705 aa  782    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  55.62 
 
 
691 aa  676    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  64.65 
 
 
843 aa  618  1e-175  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  62.39 
 
 
745 aa  596  1e-169  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  65.5 
 
 
706 aa  592  1e-168  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  46.02 
 
 
707 aa  536  1e-151  Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  44.24 
 
 
797 aa  511  1e-143  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  64.14 
 
 
775 aa  500  1e-140  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  73.47 
 
 
793 aa  473  1e-132  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  39.08 
 
 
792 aa  425  1e-117  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  58.29 
 
 
679 aa  377  1e-103  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_007298  Daro_0729  PAS  55.91 
 
 
945 aa  371  1e-101  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  52.51 
 
 
664 aa  370  1e-101  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.38 
 
 
665 aa  367  1e-100  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  51.76 
 
 
664 aa  367  1e-100  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  58.84 
 
 
679 aa  367  1e-100  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  52.64 
 
 
657 aa  365  2e-99  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  52.78 
 
 
656 aa  362  2e-98  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  52.78 
 
 
656 aa  362  2e-98  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  52.02 
 
 
657 aa  360  4e-98  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  54.18 
 
 
767 aa  359  9.999999999999999e-98  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  62.26 
 
 
566 aa  358  1.9999999999999998e-97  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  52.53 
 
 
654 aa  356  6.999999999999999e-97  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  62.39 
 
 
572 aa  352  1e-95  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_011071  Smal_3633  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.88 
 
 
845 aa  352  1e-95  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.522396 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  53.04 
 
 
860 aa  351  3e-95  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  61.37 
 
 
562 aa  350  6e-95  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  57.51 
 
 
579 aa  349  1e-94  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  62.04 
 
 
559 aa  348  2e-94  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  62.42 
 
 
701 aa  347  4e-94  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_009075  BURPS668_A0206  methyl-accepting chemotaxis protein  53.98 
 
 
793 aa  347  6e-94  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  66.34 
 
 
586 aa  346  1e-93  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.12 
 
 
1123 aa  345  2e-93  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II0158  chemotaxis protein  57.71 
 
 
779 aa  345  2e-93  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  58.81 
 
 
569 aa  345  2e-93  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  61.44 
 
 
542 aa  344  2.9999999999999997e-93  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  70.04 
 
 
592 aa  343  5e-93  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  57.64 
 
 
557 aa  343  5.999999999999999e-93  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  57.64 
 
 
557 aa  343  5.999999999999999e-93  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  61.21 
 
 
559 aa  343  8e-93  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  57.64 
 
 
557 aa  343  9e-93  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  52.56 
 
 
863 aa  342  1e-92  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  60.95 
 
 
583 aa  343  1e-92  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  55.01 
 
 
598 aa  342  1e-92  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  56.63 
 
 
578 aa  341  2.9999999999999998e-92  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.12 
 
 
864 aa  340  5e-92  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  68.18 
 
 
617 aa  339  9.999999999999999e-92  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  68.53 
 
 
608 aa  339  9.999999999999999e-92  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  68.53 
 
 
609 aa  339  9.999999999999999e-92  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  64.58 
 
 
579 aa  338  1.9999999999999998e-91  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  56.25 
 
 
589 aa  338  1.9999999999999998e-91  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  57.45 
 
 
580 aa  338  1.9999999999999998e-91  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  67.37 
 
 
601 aa  338  2.9999999999999997e-91  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  60.69 
 
 
527 aa  337  2.9999999999999997e-91  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  61.69 
 
 
578 aa  337  3.9999999999999995e-91  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  62.3 
 
 
580 aa  337  3.9999999999999995e-91  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  61.99 
 
 
561 aa  337  5.999999999999999e-91  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  60.23 
 
 
559 aa  337  7e-91  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  60.19 
 
 
596 aa  336  9e-91  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  53.24 
 
 
579 aa  335  1e-90  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  62.98 
 
 
552 aa  334  3e-90  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  47.86 
 
 
678 aa  334  4e-90  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2609  methyl-accepting chemotaxis sensory transducer  58.29 
 
 
561 aa  334  4e-90  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  56.86 
 
 
575 aa  333  7.000000000000001e-90  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  66.55 
 
 
680 aa  332  1e-89  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_008752  Aave_0421  methyl-accepting chemotaxis sensory transducer  63.61 
 
 
618 aa  333  1e-89  Acidovorax citrulli AAC00-1  Bacteria  normal  0.627209  normal 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  52.39 
 
 
586 aa  331  3e-89  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  66.67 
 
 
515 aa  331  4e-89  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_010681  Bphyt_0231  methyl-accepting chemotaxis sensory transducer  63.3 
 
 
324 aa  331  4e-89  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  47.41 
 
 
610 aa  330  5.0000000000000004e-89  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  66.67 
 
 
515 aa  330  8e-89  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  58.55 
 
 
553 aa  329  1.0000000000000001e-88  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  61.09 
 
 
537 aa  328  2.0000000000000001e-88  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  58.55 
 
 
553 aa  328  2.0000000000000001e-88  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  62.08 
 
 
584 aa  328  2.0000000000000001e-88  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  58.55 
 
 
553 aa  328  2.0000000000000001e-88  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  66.78 
 
 
513 aa  328  3e-88  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  63.12 
 
 
584 aa  328  3e-88  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  58.55 
 
 
553 aa  327  4.0000000000000003e-88  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  60.06 
 
 
591 aa  327  5e-88  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  57.34 
 
 
584 aa  327  7e-88  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  59.93 
 
 
573 aa  325  2e-87  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  56.13 
 
 
585 aa  325  2e-87  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  55.37 
 
 
587 aa  325  2e-87  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  64.21 
 
 
522 aa  325  2e-87  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  64.21 
 
 
522 aa  325  2e-87  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  56.39 
 
 
628 aa  325  2e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  60.44 
 
 
585 aa  324  3e-87  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  58.7 
 
 
552 aa  324  3e-87  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  54.72 
 
 
555 aa  324  3e-87  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  58.93 
 
 
519 aa  325  3e-87  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  66.55 
 
 
556 aa  324  3e-87  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_003296  RS03153  putative methyl-accepting chemotaxis transducer transmembrane protein  64.88 
 
 
524 aa  324  4e-87  Ralstonia solanacearum GMI1000  Bacteria  normal  0.471775  normal  0.0817308 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  56.91 
 
 
566 aa  324  4e-87  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  61.47 
 
 
576 aa  323  5e-87  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
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