More than 300 homologs were found in PanDaTox collection
for query gene Shew_2902 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007954  Sden_3066  chemotaxis sensory transducer  69.52 
 
 
488 aa  678    Shewanella denitrificans OS217  Bacteria  normal  0.301784  n/a   
 
 
-
 
NC_009092  Shew_2902  methyl-accepting chemotaxis sensory transducer  100 
 
 
479 aa  961    Shewanella loihica PV-4  Bacteria  normal  0.56843  normal  0.473301 
 
 
-
 
NC_008345  Sfri_3719  methyl-accepting chemotaxis sensory transducer  65.55 
 
 
479 aa  619  1e-176  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0481837  n/a   
 
 
-
 
NC_008700  Sama_0643  putative methyl-accepting chemotaxis sensory transducer  63.81 
 
 
478 aa  578  1e-164  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000131612  normal 
 
 
-
 
NC_009784  VIBHAR_05936  hypothetical protein  60.08 
 
 
480 aa  561  1.0000000000000001e-159  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0713  methyl-accepting chemotaxis protein  60.67 
 
 
473 aa  561  1.0000000000000001e-159  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000202  methyl-accepting chemotaxis protein  62.42 
 
 
476 aa  553  1e-156  Vibrio sp. Ex25  Bacteria  normal  0.856149  n/a   
 
 
-
 
NC_008345  Sfri_1416  methyl-accepting chemotaxis sensory transducer  41.49 
 
 
481 aa  346  5e-94  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.493152  n/a   
 
 
-
 
NC_009092  Shew_2263  methyl-accepting chemotaxis sensory transducer  42.71 
 
 
482 aa  344  2e-93  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00569391  normal  0.100749 
 
 
-
 
NC_011663  Sbal223_1632  methyl-accepting chemotaxis sensory transducer  43 
 
 
484 aa  339  8e-92  Shewanella baltica OS223  Bacteria  normal  0.19262  hitchhiker  0.00019204 
 
 
-
 
NC_009052  Sbal_2727  methyl-accepting chemotaxis sensory transducer  42.8 
 
 
484 aa  337  2.9999999999999997e-91  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000872044  n/a   
 
 
-
 
NC_009997  Sbal195_2820  methyl-accepting chemotaxis sensory transducer  42.8 
 
 
484 aa  337  3.9999999999999995e-91  Shewanella baltica OS195  Bacteria  normal  0.0806929  normal  0.41842 
 
 
-
 
NC_009665  Shew185_2744  methyl-accepting chemotaxis sensory transducer  42.8 
 
 
484 aa  337  3.9999999999999995e-91  Shewanella baltica OS185  Bacteria  normal  0.234847  n/a   
 
 
-
 
NC_008321  Shewmr4_1442  methyl-accepting chemotaxis sensory transducer  42.3 
 
 
484 aa  337  3.9999999999999995e-91  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1499  methyl-accepting chemotaxis sensory transducer  42.18 
 
 
484 aa  336  5e-91  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1507  methyl-accepting chemotaxis sensory transducer  42.8 
 
 
484 aa  336  5.999999999999999e-91  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2140  putative methyl-accepting chemotaxis sensory transducer  40.79 
 
 
479 aa  331  2e-89  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2422  methyl-accepting chemotaxis sensory transducer  43 
 
 
484 aa  328  2.0000000000000001e-88  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2947  methyl-accepting chemotaxis sensory transducer  42.36 
 
 
482 aa  323  3e-87  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1664  methyl-accepting chemotaxis sensory transducer  41.01 
 
 
482 aa  323  5e-87  Shewanella sediminis HAW-EB3  Bacteria  normal  0.587548  normal 
 
 
-
 
NC_009901  Spea_1637  methyl-accepting chemotaxis sensory transducer  41.32 
 
 
482 aa  315  1.9999999999999998e-84  Shewanella pealeana ATCC 700345  Bacteria  normal  0.301948  n/a   
 
 
-
 
NC_007954  Sden_0861  chemotaxis sensory transducer  40.79 
 
 
481 aa  310  4e-83  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1954  putative methyl-accepting chemotaxis sensory transducer  36.87 
 
 
504 aa  288  2e-76  Shewanella amazonensis SB2B  Bacteria  normal  0.0290306  normal 
 
 
-
 
NC_008321  Shewmr4_1807  methyl-accepting chemotaxis sensory transducer  38.98 
 
 
505 aa  287  4e-76  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2170  methyl-accepting chemotaxis sensory transducer  38.98 
 
 
505 aa  287  4e-76  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2217  methyl-accepting chemotaxis sensory transducer  38.99 
 
 
500 aa  286  5e-76  Shewanella loihica PV-4  Bacteria  normal  0.802205  normal  0.183546 
 
 
-
 
NC_009665  Shew185_1899  methyl-accepting chemotaxis sensory transducer  38.26 
 
 
506 aa  284  2.0000000000000002e-75  Shewanella baltica OS185  Bacteria  hitchhiker  0.000132488  n/a   
 
 
-
 
NC_009052  Sbal_1872  methyl-accepting chemotaxis sensory transducer  38.39 
 
 
506 aa  284  3.0000000000000004e-75  Shewanella baltica OS155  Bacteria  normal  0.0204582  n/a   
 
 
-
 
NC_008577  Shewana3_1862  methyl-accepting chemotaxis sensory transducer  38.61 
 
 
505 aa  283  5.000000000000001e-75  Shewanella sp. ANA-3  Bacteria  normal  0.149959  normal 
 
 
-
 
NC_011663  Sbal223_2420  methyl-accepting chemotaxis sensory transducer  38.39 
 
 
506 aa  283  6.000000000000001e-75  Shewanella baltica OS223  Bacteria  normal  0.0671416  hitchhiker  0.00255163 
 
 
-
 
NC_009997  Sbal195_1906  methyl-accepting chemotaxis sensory transducer  38.39 
 
 
506 aa  283  6.000000000000001e-75  Shewanella baltica OS195  Bacteria  hitchhiker  0.00117287  normal 
 
 
-
 
NC_004347  SO_2083  methyl-accepting chemotaxis protein  36.86 
 
 
505 aa  281  2e-74  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_1827  methyl-accepting chemotaxis sensory transducer  39.13 
 
 
502 aa  280  3e-74  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00626539  n/a   
 
 
-
 
NC_007954  Sden_1601  chemotaxis sensory transducer  37.93 
 
 
500 aa  276  6e-73  Shewanella denitrificans OS217  Bacteria  normal  0.78336  n/a   
 
 
-
 
NC_009831  Ssed_2599  methyl-accepting chemotaxis sensory transducer  37.55 
 
 
501 aa  268  2e-70  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000558383  normal 
 
 
-
 
NC_009901  Spea_2471  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
499 aa  253  6e-66  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003409  methyl-accepting chemotaxis protein  35.22 
 
 
467 aa  251  1e-65  Vibrio sp. Ex25  Bacteria  decreased coverage  0.0000050033  n/a   
 
 
-
 
NC_008345  Sfri_3852  methyl-accepting chemotaxis sensory transducer  35.39 
 
 
467 aa  250  3e-65  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02368  hypothetical protein  36.46 
 
 
472 aa  240  4e-62  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_4500  methyl-accepting chemotaxis protein  33.92 
 
 
467 aa  238  2e-61  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000000193555 
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  35.15 
 
 
557 aa  182  1e-44  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  38.98 
 
 
636 aa  177  3e-43  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  35.04 
 
 
559 aa  177  4e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  36.08 
 
 
568 aa  176  6e-43  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  36.9 
 
 
541 aa  176  8e-43  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  37.26 
 
 
712 aa  174  2.9999999999999996e-42  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  35.19 
 
 
714 aa  174  3.9999999999999995e-42  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  34.9 
 
 
714 aa  172  9e-42  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.86 
 
 
533 aa  172  1e-41  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  33.42 
 
 
653 aa  171  2e-41  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  33.76 
 
 
642 aa  171  2e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  35.9 
 
 
713 aa  171  2e-41  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  34.18 
 
 
634 aa  172  2e-41  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  36.54 
 
 
545 aa  171  2e-41  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  37.86 
 
 
533 aa  172  2e-41  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  31.77 
 
 
653 aa  171  3e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  37.15 
 
 
572 aa  171  3e-41  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  36.78 
 
 
712 aa  171  3e-41  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  34.29 
 
 
639 aa  170  4e-41  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0529  methyl-accepting chemotaxis protein-like protein  36.23 
 
 
677 aa  170  4e-41  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  36.74 
 
 
634 aa  170  4e-41  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  36.1 
 
 
561 aa  169  9e-41  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  35.56 
 
 
715 aa  169  9e-41  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  34.19 
 
 
640 aa  169  9e-41  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.33 
 
 
626 aa  169  1e-40  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  34.39 
 
 
648 aa  169  1e-40  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  38.41 
 
 
564 aa  169  1e-40  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  34.52 
 
 
653 aa  168  2e-40  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  37.14 
 
 
564 aa  168  2e-40  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  33.06 
 
 
541 aa  168  2e-40  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  32.21 
 
 
639 aa  168  2e-40  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  35.46 
 
 
640 aa  168  2e-40  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  38.35 
 
 
629 aa  167  2.9999999999999998e-40  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  37.86 
 
 
533 aa  167  2.9999999999999998e-40  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2234  putative chemotaxis transducer  37.18 
 
 
545 aa  167  5e-40  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  38.19 
 
 
533 aa  167  5e-40  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.83 
 
 
626 aa  167  5e-40  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  38.35 
 
 
640 aa  166  6.9999999999999995e-40  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  35.59 
 
 
541 aa  166  8e-40  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  37.67 
 
 
714 aa  166  8e-40  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  37.67 
 
 
714 aa  166  9e-40  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_009457  VC0395_A0931  methyl-accepting chemotaxis protein  35.13 
 
 
543 aa  166  1.0000000000000001e-39  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  34.99 
 
 
647 aa  166  1.0000000000000001e-39  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  37.67 
 
 
714 aa  166  1.0000000000000001e-39  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  37.33 
 
 
714 aa  166  1.0000000000000001e-39  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  32.21 
 
 
546 aa  165  2.0000000000000002e-39  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  33.71 
 
 
712 aa  165  2.0000000000000002e-39  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  35.88 
 
 
658 aa  165  2.0000000000000002e-39  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  35.41 
 
 
552 aa  165  2.0000000000000002e-39  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  32.51 
 
 
633 aa  164  3e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  32.99 
 
 
642 aa  164  3e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  35.46 
 
 
561 aa  164  3e-39  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  33.91 
 
 
638 aa  164  4.0000000000000004e-39  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  34.67 
 
 
626 aa  164  4.0000000000000004e-39  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  35.85 
 
 
714 aa  164  4.0000000000000004e-39  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  34.91 
 
 
738 aa  164  4.0000000000000004e-39  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  35.65 
 
 
541 aa  163  5.0000000000000005e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  34.82 
 
 
638 aa  163  5.0000000000000005e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  33.43 
 
 
554 aa  164  5.0000000000000005e-39  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  35.83 
 
 
716 aa  163  6e-39  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
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