More than 300 homologs were found in PanDaTox collection
for query gene MADE_00189 on replicon NC_011138
Organism: Alteromonas macleodii 'Deep ecotype'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011138  MADE_00189  putative methyl-accepting chemotaxis protein  100 
 
 
493 aa  993    Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_4181  methyl-accepting chemotaxis sensory transducer  32.07 
 
 
498 aa  256  4e-67  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.07397  n/a   
 
 
-
 
NC_008228  Patl_4183  methyl-accepting chemotaxis sensory transducer  34.23 
 
 
481 aa  256  1.0000000000000001e-66  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0263  methyl-accepting chemotaxis protein  29.28 
 
 
498 aa  197  3e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2397  putative methyl-accepting chemotaxis sensory transducer  27.93 
 
 
530 aa  186  6e-46  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.448764 
 
 
-
 
NC_007005  Psyr_0143  chemotaxis sensory transducer  30.02 
 
 
506 aa  179  8e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3725  chemotaxis sensory transducer  30.8 
 
 
490 aa  154  4e-36  Ralstonia eutropha JMP134  Bacteria  normal  0.473606  n/a   
 
 
-
 
NC_008322  Shewmr7_3698  methyl-accepting chemotaxis sensory transducer  29.91 
 
 
463 aa  143  7e-33  Shewanella sp. MR-7  Bacteria  normal  0.246306  normal  0.556215 
 
 
-
 
NC_008345  Sfri_0336  methyl-accepting chemotaxis sensory transducer  31.37 
 
 
500 aa  143  8e-33  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0326  methyl-accepting chemotaxis sensory transducer  29.91 
 
 
463 aa  142  9.999999999999999e-33  Shewanella sp. MR-4  Bacteria  normal  0.876228  normal 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  35.76 
 
 
541 aa  142  1.9999999999999998e-32  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_008752  Aave_0168  methyl-accepting chemotaxis sensory transducer  26.64 
 
 
488 aa  140  6e-32  Acidovorax citrulli AAC00-1  Bacteria  normal  hitchhiker  0.00133638 
 
 
-
 
NC_013501  Rmar_2782  methyl-accepting chemotaxis sensory transducer  24.51 
 
 
601 aa  137  3.0000000000000003e-31  Rhodothermus marinus DSM 4252  Bacteria  normal  0.163256  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.23 
 
 
626 aa  134  5e-30  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  31.89 
 
 
631 aa  133  6e-30  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  31.34 
 
 
645 aa  133  6.999999999999999e-30  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  31.34 
 
 
645 aa  133  6.999999999999999e-30  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  34.38 
 
 
541 aa  132  2.0000000000000002e-29  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  31.39 
 
 
558 aa  132  2.0000000000000002e-29  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  31.34 
 
 
645 aa  131  3e-29  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  31.06 
 
 
638 aa  130  5.0000000000000004e-29  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  32.18 
 
 
541 aa  129  9.000000000000001e-29  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  39.6 
 
 
628 aa  129  1.0000000000000001e-28  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.19 
 
 
626 aa  129  1.0000000000000001e-28  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_30820  putative methyl-accepting chemotaxis transducer  30.77 
 
 
535 aa  128  2.0000000000000002e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0142633  hitchhiker  0.0000000000042709 
 
 
-
 
NC_008789  Hhal_1714  methyl-accepting chemotaxis sensory transducer  28.71 
 
 
673 aa  128  2.0000000000000002e-28  Halorhodospira halophila SL1  Bacteria  normal  0.712235  n/a   
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  31.04 
 
 
645 aa  128  3e-28  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  39.81 
 
 
552 aa  127  6e-28  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_009092  Shew_2952  methyl-accepting chemotaxis sensory transducer  35.27 
 
 
541 aa  126  7e-28  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000751538  normal 
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  27.12 
 
 
549 aa  125  1e-27  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_009784  VIBHAR_05097  sensor protein TorS  35.27 
 
 
542 aa  126  1e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  27.88 
 
 
637 aa  125  1e-27  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  34.73 
 
 
536 aa  125  1e-27  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  29.5 
 
 
630 aa  125  1e-27  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  30.82 
 
 
630 aa  125  2e-27  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  36.75 
 
 
541 aa  125  2e-27  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  33.13 
 
 
671 aa  125  2e-27  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_009656  PSPA7_2644  chemotaxis transducer  33.33 
 
 
280 aa  124  3e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  0.120039  n/a   
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  30.61 
 
 
554 aa  124  3e-27  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  35.1 
 
 
633 aa  124  3e-27  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_007492  Pfl01_5515  chemotaxis sensory transducer  28.89 
 
 
658 aa  124  4e-27  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.501051  normal  0.584272 
 
 
-
 
NC_004578  PSPTO_5554  methyl-accepting chemotaxis protein  33.45 
 
 
676 aa  124  5e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  31.25 
 
 
554 aa  124  5e-27  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  27.24 
 
 
569 aa  124  5e-27  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  35.68 
 
 
542 aa  124  5e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_004004  methyl-accepting chemotaxis protein  36.93 
 
 
663 aa  123  6e-27  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.29 
 
 
623 aa  123  7e-27  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_007005  Psyr_5093  histidine kinase, HAMP region: chemotaxis sensory transducer  35.68 
 
 
676 aa  123  7e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.96 
 
 
623 aa  123  7e-27  Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  31.12 
 
 
554 aa  123  7e-27  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_009483  Gura_3063  methyl-accepting chemotaxis sensory transducer  28.25 
 
 
533 aa  123  8e-27  Geobacter uraniireducens Rf4  Bacteria  normal  0.378908  n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  37.02 
 
 
628 aa  123  9e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU0750  methyl-accepting chemotaxis protein, putative  28.88 
 
 
539 aa  122  9.999999999999999e-27  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1363  PAS  37.37 
 
 
544 aa  122  9.999999999999999e-27  Dechloromonas aromatica RCB  Bacteria  normal  hitchhiker  0.000284571 
 
 
-
 
NC_007298  Daro_2834  histidine kinase, HAMP region: chemotaxis sensory transducer  37.02 
 
 
671 aa  122  9.999999999999999e-27  Dechloromonas aromatica RCB  Bacteria  normal  0.188903  normal 
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  26.33 
 
 
570 aa  122  9.999999999999999e-27  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  30.51 
 
 
630 aa  122  9.999999999999999e-27  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  30.51 
 
 
630 aa  122  9.999999999999999e-27  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  29 
 
 
632 aa  122  9.999999999999999e-27  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009654  Mmwyl1_0922  methyl-accepting chemotaxis sensory transducer  29.24 
 
 
674 aa  122  9.999999999999999e-27  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  29.59 
 
 
621 aa  121  1.9999999999999998e-26  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_013502  Rmar_2870  methyl-accepting chemotaxis sensory transducer  34.73 
 
 
636 aa  122  1.9999999999999998e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0210  methyl-accepting chemotaxis sensory transducer  31.95 
 
 
632 aa  122  1.9999999999999998e-26  Pseudomonas putida W619  Bacteria  normal  0.248487  normal  0.150257 
 
 
-
 
NC_009997  Sbal195_1117  methyl-accepting chemotaxis sensory transducer  41.57 
 
 
541 aa  121  1.9999999999999998e-26  Shewanella baltica OS195  Bacteria  normal  0.0100073  normal  0.0339889 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  31.38 
 
 
554 aa  122  1.9999999999999998e-26  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  35.37 
 
 
627 aa  121  1.9999999999999998e-26  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  31.56 
 
 
628 aa  122  1.9999999999999998e-26  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  28.66 
 
 
716 aa  122  1.9999999999999998e-26  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_008609  Ppro_0042  methyl-accepting chemotaxis sensory transducer  30.91 
 
 
565 aa  121  1.9999999999999998e-26  Pelobacter propionicus DSM 2379  Bacteria  normal  0.121118  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  31.33 
 
 
636 aa  121  3e-26  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  29.97 
 
 
646 aa  121  3e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  30.36 
 
 
554 aa  121  3e-26  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2177  methyl-accepting chemotaxis sensory transducer  32.78 
 
 
628 aa  121  3e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1015  methyl-accepting chemotaxis sensory transducer  41.57 
 
 
541 aa  121  3e-26  Shewanella baltica OS155  Bacteria  unclonable  0.0000000434326  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  28.37 
 
 
638 aa  121  3e-26  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_011663  Sbal223_3274  methyl-accepting chemotaxis sensory transducer  41.57 
 
 
541 aa  121  3e-26  Shewanella baltica OS223  Bacteria  normal  0.0175031  normal  0.083895 
 
 
-
 
NC_008321  Shewmr4_2995  methyl-accepting chemotaxis sensory transducer  40.45 
 
 
541 aa  121  3e-26  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00226615  normal  0.196783 
 
 
-
 
NC_011663  Sbal223_3601  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.66 
 
 
554 aa  121  3e-26  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3076  methyl-accepting chemotaxis sensory transducer  40.45 
 
 
541 aa  121  3e-26  Shewanella sp. MR-7  Bacteria  unclonable  0.0000214454  normal  0.805143 
 
 
-
 
NC_009665  Shew185_1084  methyl-accepting chemotaxis sensory transducer  41.57 
 
 
541 aa  121  3e-26  Shewanella baltica OS185  Bacteria  hitchhiker  0.000100295  n/a   
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  28.3 
 
 
544 aa  121  3e-26  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  30.99 
 
 
646 aa  120  3.9999999999999996e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_010524  Lcho_1601  methyl-accepting chemotaxis sensory transducer  27.64 
 
 
490 aa  120  3.9999999999999996e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000628162 
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  32.66 
 
 
568 aa  120  3.9999999999999996e-26  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  32.66 
 
 
554 aa  120  3.9999999999999996e-26  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2652  methyl-accepting chemotaxis protein  28.3 
 
 
392 aa  120  4.9999999999999996e-26  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0606  methyl-accepting chemotaxis protein  27.99 
 
 
587 aa  120  4.9999999999999996e-26  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001261  methyl-accepting chemotaxis protein  29.84 
 
 
547 aa  120  6e-26  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  30.21 
 
 
630 aa  120  6e-26  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_008577  Shewana3_3173  methyl-accepting chemotaxis sensory transducer  40.45 
 
 
541 aa  120  6e-26  Shewanella sp. ANA-3  Bacteria  normal  0.0131988  normal 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  31.09 
 
 
554 aa  120  6e-26  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_01518  hypothetical protein  34.63 
 
 
674 aa  120  7e-26  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  31.75 
 
 
548 aa  119  7.999999999999999e-26  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0749  methyl-accepting chemotaxis sensory transducer  31.76 
 
 
657 aa  120  7.999999999999999e-26  Thermosipho melanesiensis BI429  Bacteria  normal  0.388814  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  28.05 
 
 
712 aa  120  7.999999999999999e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_013501  Rmar_1624  methyl-accepting chemotaxis sensory transducer  34.02 
 
 
626 aa  119  7.999999999999999e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  0.835429  n/a   
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  32.38 
 
 
554 aa  120  7.999999999999999e-26  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1020  methyl-accepting chemotaxis sensory transducer  41.01 
 
 
541 aa  119  9e-26  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00762848  n/a   
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  32.75 
 
 
623 aa  119  9.999999999999999e-26  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  30.59 
 
 
554 aa  119  9.999999999999999e-26  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
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