| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4181 |
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| Symbol | |
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| ID | 4175970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5035787 |
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| End bp | 5037283 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638057217 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_663734 |
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| Protein GI | 109900479 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.07397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGACC GTCATTATGC TTGGGTCACT AGCGCAAACA AAAATATGCA AATTACCTTC
ATTGCGTTAG CGATCATCAG CTTAGCCTTG GCCAATTTTA ATCAAACCTG GATAGAAGCC
ATTCTGGTTG GCGGCTCGAC GAGTGTTATA TGTTTAACCT TTATTCACCT AAAGCCTCAG
TCACGTTTAA CTCAACATGT TGTGGCCATT GGCTTAATGC TGTTTACGGC ACTTCATATT
CACCAGATGC ATGGGCTAGT AGAGATGCAC TTTGGGATCT TTGTGCTGCT CTCGTTCTTA
GCGTACTACC GAAATTGGCG GTTGTACGTG ACCGCGATTT TAGTGGTGGT TGTGCACCAT
CTTAGTTTCT TTGTGATGCA ATCAAAAGGG ATGGGGGTGT ACGTTTTAGC GGATGGTGGT
CTGCTGTTTT ATCTTATTAT CGTGCATGCT GTTTATGCTC TGGTGCAAGC CTTGATGCTG
GCTAAAATGG CAAAAGACAA TCAAGTTGAG TCACTTTCTG CTGCAGCCCT TACCAGCAGC
ATCGAAAAAA TCATGAGCGA CAGAGCAGCA ATTGATTTGA AGGTCAGGGC GGATCAAACA
CTCAATGCCG ATTCTGTGGT GGCGTTCAAT AATTTACTTA GCATGTTCGA CAATCTGATC
ACCGGTATGC GCGGGGCTGC AGAGCAAATT AATAGTACCT CCGTGATCAC CAACCAAAAT
AGCACGGAGT TACATGGGAT TAAGCAAAAA AGTATGACTG AAGTGCAGTA TATCGATACG
GCTTCAATTG AACTGGCTCA ATCCTCACGC ACCATGAACG AAGACACAAA GCGCGTGCAA
CAGCAATCTA CAGAAGCGCA CAGTCATGTC CACGAAGCAG AACAAACGGT GGATGAAACG
AAAGAAGACG TGACTAACCT AGGGACCAAG CTGAGTGAAA CGAATGAGAA TGTGCGCAAC
CTCGCTGATA ATTGCCAGAG TATTTCACAA GTACTTGAGA CCATTAAATC GATAGCAGAT
CAGACTAACT TATTGGCATT GAATGCCGCT ATTGAAGCCG CAAGGGCTGG GGAGCATGGC
CGTGGTTTTG CTGTGGTCGC AGATGAAGTG AGAACGCTCG CTTCGCGCAC TAAAAAAAGT
ACGGAAGAGG TAAACCTCAT TGTTGAGAAC CTGTTGAGTT CATCCAAATT GTCCAGCGAT
TCTATGGCTG ATTGCCTATC GCTAAGTGGA ACTGCTAACA CTAGAACACA AAAAGCTCGC
GACCTAATGA GCCAGGTTCA GCATAATATT TTGCAGATGA CGGAAGCGGT CAATATGATG
ACGGAATCCA GTGAGCAACA AATACACAAT AGCGAGACAA TTCAAAGTGC CGCCACAAGA
TTGAAGTCTA TTAACCAAGA TGAGCTCACA AAGATCGCTG CCATGGATCA CGAAGCAGGC
TTGCTCTCAG GCAGAACCAA AGATCTTAAT TTACAGTTAT CGCAGTTTTC CACCTAG
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| Protein sequence | MSDRHYAWVT SANKNMQITF IALAIISLAL ANFNQTWIEA ILVGGSTSVI CLTFIHLKPQ
SRLTQHVVAI GLMLFTALHI HQMHGLVEMH FGIFVLLSFL AYYRNWRLYV TAILVVVVHH
LSFFVMQSKG MGVYVLADGG LLFYLIIVHA VYALVQALML AKMAKDNQVE SLSAAALTSS
IEKIMSDRAA IDLKVRADQT LNADSVVAFN NLLSMFDNLI TGMRGAAEQI NSTSVITNQN
STELHGIKQK SMTEVQYIDT ASIELAQSSR TMNEDTKRVQ QQSTEAHSHV HEAEQTVDET
KEDVTNLGTK LSETNENVRN LADNCQSISQ VLETIKSIAD QTNLLALNAA IEAARAGEHG
RGFAVVADEV RTLASRTKKS TEEVNLIVEN LLSSSKLSSD SMADCLSLSG TANTRTQKAR
DLMSQVQHNI LQMTEAVNMM TESSEQQIHN SETIQSAATR LKSINQDELT KIAAMDHEAG
LLSGRTKDLN LQLSQFST
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