More than 300 homologs were found in PanDaTox collection
for query gene Sama_2397 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_2397  putative methyl-accepting chemotaxis sensory transducer  100 
 
 
530 aa  1080    Shewanella amazonensis SB2B  Bacteria  normal  normal  0.448764 
 
 
-
 
NC_004578  PSPTO_0263  methyl-accepting chemotaxis protein  38.03 
 
 
498 aa  260  4e-68  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0143  chemotaxis sensory transducer  35.52 
 
 
506 aa  231  3e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_00189  putative methyl-accepting chemotaxis protein  27.93 
 
 
493 aa  200  6e-50  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_4181  methyl-accepting chemotaxis sensory transducer  29.09 
 
 
498 aa  197  3e-49  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.07397  n/a   
 
 
-
 
NC_008228  Patl_4183  methyl-accepting chemotaxis sensory transducer  32.06 
 
 
481 aa  188  2e-46  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  37.33 
 
 
544 aa  181  2.9999999999999997e-44  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  34.67 
 
 
543 aa  179  8e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  38.27 
 
 
544 aa  179  1e-43  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0185  methyl-accepting chemotaxis protein  41.47 
 
 
770 aa  179  1e-43  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  36.73 
 
 
541 aa  178  2e-43  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  38.81 
 
 
636 aa  177  6e-43  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  34.92 
 
 
630 aa  175  1.9999999999999998e-42  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.54 
 
 
523 aa  174  2.9999999999999996e-42  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  36.42 
 
 
681 aa  174  3.9999999999999995e-42  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_008321  Shewmr4_0326  methyl-accepting chemotaxis sensory transducer  31.21 
 
 
463 aa  174  3.9999999999999995e-42  Shewanella sp. MR-4  Bacteria  normal  0.876228  normal 
 
 
-
 
NC_008322  Shewmr7_3698  methyl-accepting chemotaxis sensory transducer  31.21 
 
 
463 aa  174  3.9999999999999995e-42  Shewanella sp. MR-7  Bacteria  normal  0.246306  normal  0.556215 
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  38.43 
 
 
671 aa  174  5e-42  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
630 aa  173  5.999999999999999e-42  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  40.86 
 
 
552 aa  173  6.999999999999999e-42  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
630 aa  173  6.999999999999999e-42  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  35.28 
 
 
564 aa  173  7.999999999999999e-42  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  39.02 
 
 
637 aa  173  9e-42  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  34.08 
 
 
630 aa  172  1e-41  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  41.06 
 
 
568 aa  172  1e-41  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  39.78 
 
 
713 aa  172  1e-41  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  38.93 
 
 
716 aa  172  2e-41  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  36.25 
 
 
645 aa  172  2e-41  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  42.57 
 
 
544 aa  171  3e-41  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  39.58 
 
 
553 aa  171  3e-41  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  36.25 
 
 
630 aa  171  3e-41  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  36.51 
 
 
544 aa  170  5e-41  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  38.93 
 
 
712 aa  170  5e-41  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  38.03 
 
 
554 aa  170  6e-41  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  35.92 
 
 
645 aa  170  7e-41  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  39.6 
 
 
712 aa  170  7e-41  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  40.54 
 
 
545 aa  170  7e-41  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
554 aa  169  8e-41  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  35.87 
 
 
544 aa  169  9e-41  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  46.89 
 
 
545 aa  169  1e-40  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  32.08 
 
 
630 aa  169  1e-40  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.08 
 
 
630 aa  169  1e-40  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  37.72 
 
 
640 aa  169  1e-40  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  33.51 
 
 
638 aa  169  1e-40  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  32.08 
 
 
630 aa  169  1e-40  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  37.7 
 
 
541 aa  169  1e-40  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  36.11 
 
 
541 aa  168  2e-40  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  32.08 
 
 
630 aa  169  2e-40  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3699  methyl-accepting chemotaxis protein  42.41 
 
 
543 aa  169  2e-40  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  38.11 
 
 
554 aa  168  2e-40  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1999  methyl-accepting chemotaxis sensory transducer  39.16 
 
 
405 aa  168  2e-40  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  38.44 
 
 
553 aa  168  2.9999999999999998e-40  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  35.28 
 
 
645 aa  167  4e-40  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  35.07 
 
 
630 aa  167  4e-40  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  35.28 
 
 
645 aa  167  5e-40  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_008740  Maqu_2789  methyl-accepting chemotaxis sensory transducer  38.93 
 
 
545 aa  167  5.9999999999999996e-40  Marinobacter aquaeolei VT8  Bacteria  normal  0.888266  n/a   
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  37.76 
 
 
676 aa  166  9e-40  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_5093  histidine kinase, HAMP region: chemotaxis sensory transducer  38.79 
 
 
676 aa  166  9e-40  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  37.99 
 
 
554 aa  166  1.0000000000000001e-39  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  38.49 
 
 
629 aa  166  1.0000000000000001e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2398  methyl-accepting chemotaxis sensory transducer  35.74 
 
 
656 aa  166  1.0000000000000001e-39  Shewanella pealeana ATCC 700345  Bacteria  normal  0.201842  n/a   
 
 
-
 
NC_009438  Sputcn32_0925  methyl-accepting chemotaxis sensory transducer  39.16 
 
 
543 aa  166  1.0000000000000001e-39  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  38.75 
 
 
622 aa  166  1.0000000000000001e-39  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  39.1 
 
 
640 aa  165  2.0000000000000002e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_009438  Sputcn32_0672  methyl-accepting chemotaxis sensory transducer  32.02 
 
 
568 aa  165  2.0000000000000002e-39  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  41.54 
 
 
554 aa  164  3e-39  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2814  methyl-accepting chemotaxis sensory transducer  36.04 
 
 
702 aa  164  4.0000000000000004e-39  Shewanella woodyi ATCC 51908  Bacteria  normal  0.650804  normal 
 
 
-
 
NC_011663  Sbal223_3382  methyl-accepting chemotaxis sensory transducer  38.4 
 
 
543 aa  164  4.0000000000000004e-39  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3455  methyl-accepting chemotaxis sensory transducer  38.4 
 
 
543 aa  164  4.0000000000000004e-39  Shewanella baltica OS185  Bacteria  normal  0.0121993  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  36.9 
 
 
543 aa  164  5.0000000000000005e-39  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2601  chemotaxis sensory transducer  35.56 
 
 
569 aa  164  5.0000000000000005e-39  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.441915  normal  0.36116 
 
 
-
 
NC_009831  Ssed_3256  methyl-accepting chemotaxis protein  37.05 
 
 
558 aa  163  6e-39  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  32.7 
 
 
650 aa  163  6e-39  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  33.06 
 
 
554 aa  163  6e-39  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  37.99 
 
 
554 aa  163  6e-39  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_009997  Sbal195_3579  methyl-accepting chemotaxis sensory transducer  38.4 
 
 
543 aa  163  6e-39  Shewanella baltica OS195  Bacteria  normal  normal  0.0986947 
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  35.99 
 
 
631 aa  163  7e-39  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  39.23 
 
 
554 aa  163  7e-39  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_011663  Sbal223_3352  methyl-accepting chemotaxis sensory transducer  36.39 
 
 
573 aa  163  7e-39  Shewanella baltica OS223  Bacteria  normal  0.729863  normal 
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  34.01 
 
 
640 aa  163  8.000000000000001e-39  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_010506  Swoo_3576  methyl-accepting chemotaxis sensory transducer  34.62 
 
 
772 aa  163  8.000000000000001e-39  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0207298 
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.06 
 
 
554 aa  163  8.000000000000001e-39  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  33.06 
 
 
554 aa  163  8.000000000000001e-39  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  38.13 
 
 
640 aa  163  9e-39  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  33.06 
 
 
554 aa  163  9e-39  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_009052  Sbal_0938  methyl-accepting chemotaxis sensory transducer  36.39 
 
 
548 aa  162  1e-38  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3424  methyl-accepting chemotaxis sensory transducer  36.39 
 
 
548 aa  162  1e-38  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  36.61 
 
 
674 aa  162  1e-38  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_007005  Psyr_3735  PAS  37.12 
 
 
521 aa  162  1e-38  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  37.69 
 
 
544 aa  162  1e-38  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3549  methyl-accepting chemotaxis sensory transducer  36.39 
 
 
548 aa  162  1e-38  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  38.77 
 
 
540 aa  162  1e-38  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  39.23 
 
 
554 aa  162  1e-38  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  36.05 
 
 
623 aa  161  2e-38  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  35.86 
 
 
546 aa  162  2e-38  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  37.91 
 
 
636 aa  162  2e-38  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  36.52 
 
 
620 aa  161  2e-38  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  39.23 
 
 
568 aa  162  2e-38  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0908  methyl-accepting chemotaxis sensory transducer  38.15 
 
 
543 aa  162  2e-38  Shewanella baltica OS155  Bacteria  normal  0.073872  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  39.72 
 
 
679 aa  161  3e-38  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
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