More than 300 homologs were found in PanDaTox collection
for query gene PSPTO_0263 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_0263  methyl-accepting chemotaxis protein  100 
 
 
498 aa  1006    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0143  chemotaxis sensory transducer  91.75 
 
 
506 aa  891    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_4181  methyl-accepting chemotaxis sensory transducer  33.04 
 
 
498 aa  239  6.999999999999999e-62  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.07397  n/a   
 
 
-
 
NC_008700  Sama_2397  putative methyl-accepting chemotaxis sensory transducer  37.53 
 
 
530 aa  233  7.000000000000001e-60  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.448764 
 
 
-
 
NC_008228  Patl_4183  methyl-accepting chemotaxis sensory transducer  32.81 
 
 
481 aa  217  4e-55  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2782  methyl-accepting chemotaxis sensory transducer  30.54 
 
 
601 aa  199  1.0000000000000001e-49  Rhodothermus marinus DSM 4252  Bacteria  normal  0.163256  n/a   
 
 
-
 
NC_011138  MADE_00189  putative methyl-accepting chemotaxis protein  29.28 
 
 
493 aa  197  3e-49  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
638 aa  186  1.0000000000000001e-45  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  40.61 
 
 
636 aa  186  1.0000000000000001e-45  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  40.4 
 
 
638 aa  185  1.0000000000000001e-45  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_008752  Aave_0168  methyl-accepting chemotaxis sensory transducer  33.54 
 
 
488 aa  182  1e-44  Acidovorax citrulli AAC00-1  Bacteria  normal  hitchhiker  0.00133638 
 
 
-
 
NC_007348  Reut_B3725  chemotaxis sensory transducer  32.22 
 
 
490 aa  181  2.9999999999999997e-44  Ralstonia eutropha JMP134  Bacteria  normal  0.473606  n/a   
 
 
-
 
NC_007912  Sde_0391  methyl-accepting chemotaxis sensory transducer  36.51 
 
 
499 aa  181  4e-44  Saccharophagus degradans 2-40  Bacteria  normal  0.0811848  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  41.16 
 
 
639 aa  180  5.999999999999999e-44  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  37.2 
 
 
548 aa  177  5e-43  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  37.88 
 
 
638 aa  177  6e-43  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  41.69 
 
 
552 aa  176  9e-43  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  38.7 
 
 
638 aa  176  9.999999999999999e-43  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  38.91 
 
 
552 aa  174  2.9999999999999996e-42  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  37.59 
 
 
713 aa  173  5.999999999999999e-42  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
636 aa  172  9e-42  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  38.03 
 
 
638 aa  171  4e-41  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  38.91 
 
 
628 aa  170  5e-41  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
640 aa  170  5e-41  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  34.54 
 
 
773 aa  170  5e-41  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_009438  Sputcn32_1396  methyl-accepting chemotaxis sensory transducer  36.3 
 
 
548 aa  170  6e-41  Shewanella putrefaciens CN-32  Bacteria  normal  0.664947  n/a   
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.91 
 
 
628 aa  169  7e-41  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.03 
 
 
626 aa  169  9e-41  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  38.91 
 
 
643 aa  169  1e-40  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  40 
 
 
681 aa  169  1e-40  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  38.36 
 
 
650 aa  169  1e-40  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_1084  methyl-accepting chemotaxis sensory transducer  39.6 
 
 
541 aa  168  2e-40  Shewanella baltica OS185  Bacteria  hitchhiker  0.000100295  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  37.59 
 
 
716 aa  168  2e-40  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  38.91 
 
 
638 aa  168  2e-40  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01731  Methyl-accepting chemotaxis protein  36.72 
 
 
539 aa  168  2e-40  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3274  methyl-accepting chemotaxis sensory transducer  39.6 
 
 
541 aa  167  2.9999999999999998e-40  Shewanella baltica OS223  Bacteria  normal  0.0175031  normal  0.083895 
 
 
-
 
NC_011138  MADE_00464  methyl-accepting chemotaxis protein  35.45 
 
 
636 aa  167  2.9999999999999998e-40  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  37.8 
 
 
712 aa  167  2.9999999999999998e-40  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  41.26 
 
 
647 aa  167  2.9999999999999998e-40  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3698  methyl-accepting chemotaxis sensory transducer  32.48 
 
 
463 aa  167  4e-40  Shewanella sp. MR-7  Bacteria  normal  0.246306  normal  0.556215 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  37.8 
 
 
712 aa  167  5.9999999999999996e-40  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009997  Sbal195_1117  methyl-accepting chemotaxis sensory transducer  39.8 
 
 
541 aa  167  5.9999999999999996e-40  Shewanella baltica OS195  Bacteria  normal  0.0100073  normal  0.0339889 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  40.14 
 
 
564 aa  167  5.9999999999999996e-40  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  37.54 
 
 
626 aa  166  5.9999999999999996e-40  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_008321  Shewmr4_0326  methyl-accepting chemotaxis sensory transducer  32.48 
 
 
463 aa  167  5.9999999999999996e-40  Shewanella sp. MR-4  Bacteria  normal  0.876228  normal 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  37.66 
 
 
541 aa  166  1.0000000000000001e-39  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  39.29 
 
 
676 aa  164  2.0000000000000002e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  40.28 
 
 
642 aa  165  2.0000000000000002e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
645 aa  165  2.0000000000000002e-39  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_009052  Sbal_1015  methyl-accepting chemotaxis sensory transducer  39.27 
 
 
541 aa  165  2.0000000000000002e-39  Shewanella baltica OS155  Bacteria  unclonable  0.0000000434326  n/a   
 
 
-
 
NC_009665  Shew185_3782  methyl-accepting chemotaxis sensory transducer  43.42 
 
 
524 aa  164  3e-39  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  39.79 
 
 
541 aa  164  3e-39  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  37.37 
 
 
545 aa  164  4.0000000000000004e-39  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  43.56 
 
 
524 aa  164  5.0000000000000005e-39  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  43.04 
 
 
646 aa  164  5.0000000000000005e-39  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_009052  Sbal_0543  methyl-accepting chemotaxis sensory transducer  43.56 
 
 
524 aa  163  6e-39  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.34 
 
 
524 aa  163  6e-39  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  37.99 
 
 
638 aa  163  6e-39  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  41.16 
 
 
636 aa  163  6e-39  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1789  chemotaxis sensory transducer  42.26 
 
 
546 aa  163  6e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.478165  decreased coverage  0.000703042 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  37.17 
 
 
541 aa  163  6e-39  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3725  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.56 
 
 
524 aa  163  6e-39  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  36.73 
 
 
625 aa  163  7e-39  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_009438  Sputcn32_1020  methyl-accepting chemotaxis sensory transducer  37.99 
 
 
541 aa  163  8.000000000000001e-39  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00762848  n/a   
 
 
-
 
NC_007912  Sde_0671  putative methyl-accepting chemotaxis sensory transducer  40 
 
 
531 aa  163  8.000000000000001e-39  Saccharophagus degradans 2-40  Bacteria  normal  0.178659  hitchhiker  0.000000219808 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  41.83 
 
 
624 aa  162  1e-38  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  36.05 
 
 
632 aa  162  1e-38  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  39.36 
 
 
642 aa  162  1e-38  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_008577  Shewana3_3173  methyl-accepting chemotaxis sensory transducer  37.66 
 
 
541 aa  162  1e-38  Shewanella sp. ANA-3  Bacteria  normal  0.0131988  normal 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  40.54 
 
 
714 aa  162  1e-38  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  37.2 
 
 
629 aa  162  1e-38  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  42.22 
 
 
524 aa  161  2e-38  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_0513  methyl-accepting chemotaxis sensory transducer  37.93 
 
 
542 aa  161  2e-38  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.12 
 
 
523 aa  162  2e-38  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  36.69 
 
 
541 aa  161  2e-38  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  39.35 
 
 
638 aa  160  3e-38  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  36.05 
 
 
632 aa  161  3e-38  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  36.18 
 
 
540 aa  161  3e-38  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.89 
 
 
524 aa  161  3e-38  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  41.77 
 
 
541 aa  160  3e-38  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.89 
 
 
524 aa  161  3e-38  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  39.35 
 
 
638 aa  160  4e-38  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_008321  Shewmr4_2995  methyl-accepting chemotaxis sensory transducer  37.33 
 
 
541 aa  160  4e-38  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00226615  normal  0.196783 
 
 
-
 
NC_008322  Shewmr7_3076  methyl-accepting chemotaxis sensory transducer  37.33 
 
 
541 aa  160  4e-38  Shewanella sp. MR-7  Bacteria  unclonable  0.0000214454  normal  0.805143 
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  38.78 
 
 
541 aa  160  5e-38  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  39.65 
 
 
541 aa  159  7e-38  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  39.37 
 
 
638 aa  159  7e-38  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  39.36 
 
 
541 aa  159  8e-38  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  35.84 
 
 
546 aa  159  9e-38  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.77 
 
 
526 aa  159  1e-37  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.3 
 
 
624 aa  159  1e-37  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  38.21 
 
 
645 aa  159  1e-37  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  35.96 
 
 
629 aa  159  1e-37  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  36.3 
 
 
629 aa  159  1e-37  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_009784  VIBHAR_05136  torS; sensor protein TorS  36.64 
 
 
558 aa  159  1e-37  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  36.7 
 
 
568 aa  158  2e-37  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  38.3 
 
 
619 aa  159  2e-37  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  41.04 
 
 
542 aa  158  2e-37  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_008740  Maqu_0956  methyl-accepting chemotaxis sensory transducer  34.1 
 
 
676 aa  158  2e-37  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0143  methyl-accepting chemotaxis sensory transducer  38.69 
 
 
539 aa  159  2e-37  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
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