| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4186 |
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| Symbol | |
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| ID | 6118541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5090290 |
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| End bp | 5091870 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635752 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_001762537 |
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| Protein GI | 170728511 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACAAA ATTTACCTGT CACTCAGAAA AATTATGATT ACCCAGCAGA TTGGATACTA
CTTTCGACTA CTGATACCAG TAGTATCATA AAATATGCAA ATCCGTCATT TTGTGAAGTT
GCTGGTTACC AGTTAGATGA AATGGTTGGC GAACCTCATA ATATGGTGCG CCACCCTGAT
ATGCCGCCAG CAGCCTTCGA AGATATGTGG ACAACTATCA AAGGCGGTCA CCCTTGGAAG
GGGATGGTTA AAAATCGTTG TGCCAATGGC GATCATTACT GGGTTGATGC TTTTGTTACT
CCGATCTCAG AAGGCGGAAA GGTCGTAGAG TATCAATCTG TTCGAACTAA GCCTTCATCT
GAACAGATAA CCCGAGCAGA AGAGTCCTAT AAAGAGCTTA ACGAGAAGGG CAGCATTGCC
AAGCTAAAGC GTGTTATGAG CTTGCCGAAT AAAATTATGG CCCTTTCGGT GATTGCATTG
CTACCTATGC TATATATTGC GCTTCAATCT GGATTACTCG GAATAGGCCT GTTTGTCGTA
ACAGCACTCG TGTTGCTTCT TGGTTTAAAT ATGCTGTTTT CAAGGTATAA AGCAATCGTT
GATCATTGTA AGGCTATTTA CACTAGTCCC TTAATGTCCT ACCTATATAC TGGCCATACA
GATGATATAG CCCAAATTGA ATTAGCATTG AGAATGCAGT CATCTGAGAT GAAAGCGATG
TTAGGTCGTG CTCTTGACTC CTGTGAGCAG TCTGCATGTA AAGCAAGTGA ATCTGTGACT
AAGGGGGAGG AAGTGAAAAA TAACAGTGAC TCCTTAACTC GTGAGGTTGA ACAGGTTGCA
ACGGCGATGC AAGAGATGAC CGCGACTTTA GGTGATATGG CTTCAAACTG TTCAGATGCT
GCTAACTCAT CTCAATCTGC CTCTGATGAA GCAAATGCAG GTGATGCTAT TGTGACTCAA
ACAATATCTT CAATAGAGTT AATGTCTTCC CAGCTCACTG AAACATCATT AGTCATTAAA
GATTTGGAGG AGCAGAGCAA AGGGATTGGA ACGGTTTTAG ACGTGATCCA AAGTATTGCA
GAGCAAACAA ATCTACTGGC ATTAAATGCT GCCATTGAGG CTGCAAGGGC CGGTGAGCAA
GGTCGTGGTT TTGCGGTTGT TGCTGATGAA GTACGAGCAC TGGCCAAACG AACTCATGAT
TCAACAACTG AGATTCAGAA TATGATTAAT CTGCTGCAGC AGGGAACAGA AAAAGCTGTG
CAGAGTATGC ATCAAGGTGC AGATTCAGCT TCACAATGTG TTGATCAAGC GGCTCAAGCG
GGTAATGCAT TGAGGACAAT TAAAGAGGCT ATTACCTCTA TTTCAGATAT GACTCACCAT
ATCGCCAGTG CAGTTGAGGA GCAATCAAGC GTCTCTAATG AGGTGAATCG CAGTATGGTT
AACATCTCTC AACTGAATGG CTCATCCAAT GATTTAGGCG ATGAGATGAT AGGTTTAAAT
CATGTAGTGG TGACCAATAT TAACTCGCAG AAGGCCTTGG TAGAGCAGTT CCTTAAACGG
AGTCAGAAGC AAGCTTTATA G
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| Protein sequence | MRQNLPVTQK NYDYPADWIL LSTTDTSSII KYANPSFCEV AGYQLDEMVG EPHNMVRHPD
MPPAAFEDMW TTIKGGHPWK GMVKNRCANG DHYWVDAFVT PISEGGKVVE YQSVRTKPSS
EQITRAEESY KELNEKGSIA KLKRVMSLPN KIMALSVIAL LPMLYIALQS GLLGIGLFVV
TALVLLLGLN MLFSRYKAIV DHCKAIYTSP LMSYLYTGHT DDIAQIELAL RMQSSEMKAM
LGRALDSCEQ SACKASESVT KGEEVKNNSD SLTREVEQVA TAMQEMTATL GDMASNCSDA
ANSSQSASDE ANAGDAIVTQ TISSIELMSS QLTETSLVIK DLEEQSKGIG TVLDVIQSIA
EQTNLLALNA AIEAARAGEQ GRGFAVVADE VRALAKRTHD STTEIQNMIN LLQQGTEKAV
QSMHQGADSA SQCVDQAAQA GNALRTIKEA ITSISDMTHH IASAVEEQSS VSNEVNRSMV
NISQLNGSSN DLGDEMIGLN HVVVTNINSQ KALVEQFLKR SQKQAL
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