More than 300 homologs were found in PanDaTox collection
for query gene SO_0584 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  63.48 
 
 
526 aa  684    Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  100 
 
 
524 aa  1088    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_0543  methyl-accepting chemotaxis sensory transducer  81.3 
 
 
524 aa  864    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  81.49 
 
 
524 aa  867    Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3294  methyl-accepting chemotaxis sensory transducer  80.53 
 
 
524 aa  870    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3782  methyl-accepting chemotaxis sensory transducer  81.11 
 
 
524 aa  864    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  88.17 
 
 
524 aa  941    Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_011663  Sbal223_3725  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  81.3 
 
 
524 aa  864    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  88.36 
 
 
524 aa  943    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  89.31 
 
 
524 aa  952    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  42.56 
 
 
518 aa  407  1.0000000000000001e-112  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.72 
 
 
523 aa  390  1e-107  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  41.23 
 
 
521 aa  380  1e-104  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  41.17 
 
 
529 aa  377  1e-103  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  39.2 
 
 
521 aa  373  1e-102  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_007005  Psyr_3406  PAS  40.85 
 
 
521 aa  374  1e-102  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.97 
 
 
521 aa  375  1e-102  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  39.09 
 
 
521 aa  365  1e-99  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2111  aerotaxis receptor Aer-2  39.09 
 
 
521 aa  365  2e-99  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  38.65 
 
 
521 aa  363  3e-99  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.81 
 
 
521 aa  363  4e-99  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_013457  VEA_001512  aerotaxis sensor receptor protein  39.04 
 
 
516 aa  363  5.0000000000000005e-99  Vibrio sp. Ex25  Bacteria  normal  0.961146  n/a   
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.28 
 
 
521 aa  362  7.0000000000000005e-99  Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_008463  PA14_44300  aerotaxis receptor Aer  38.46 
 
 
521 aa  362  1e-98  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  39.47 
 
 
521 aa  361  2e-98  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.24 
 
 
524 aa  350  2e-95  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  39.59 
 
 
524 aa  338  1.9999999999999998e-91  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  39.29 
 
 
521 aa  333  3e-90  Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.06 
 
 
521 aa  332  7.000000000000001e-90  Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  37.8 
 
 
534 aa  332  9e-90  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_4521  aerotaxis receptor, putative  37.47 
 
 
521 aa  332  1e-89  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  38.35 
 
 
532 aa  332  1e-89  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.03 
 
 
521 aa  331  2e-89  Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_009901  Spea_0337  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.74 
 
 
517 aa  330  5.0000000000000004e-89  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2159  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.11 
 
 
523 aa  330  6e-89  Shewanella loihica PV-4  Bacteria  normal  0.416992  normal  0.881373 
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  36.75 
 
 
521 aa  327  3e-88  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.02 
 
 
516 aa  327  4.0000000000000003e-88  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_009439  Pmen_4451  methyl-accepting chemotaxis sensory transducer  40.16 
 
 
531 aa  326  7e-88  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3735  PAS  36.35 
 
 
521 aa  324  2e-87  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_008740  Maqu_3270  methyl-accepting chemotaxis sensory transducer  35.35 
 
 
532 aa  320  3e-86  Marinobacter aquaeolei VT8  Bacteria  normal  0.415489  n/a   
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  36.42 
 
 
518 aa  315  9.999999999999999e-85  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  37.6 
 
 
521 aa  313  4.999999999999999e-84  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  35.92 
 
 
522 aa  313  6.999999999999999e-84  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  35.7 
 
 
532 aa  309  1.0000000000000001e-82  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  36.31 
 
 
515 aa  308  1.0000000000000001e-82  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.6 
 
 
521 aa  307  3e-82  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  37.4 
 
 
521 aa  304  3.0000000000000004e-81  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_008740  Maqu_0262  methyl-accepting chemotaxis sensory transducer  35.12 
 
 
524 aa  302  9e-81  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0389  methyl-accepting chemotaxis sensory transducer  40.53 
 
 
419 aa  299  1e-79  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03783  Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)  34.84 
 
 
527 aa  298  2e-79  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  36.59 
 
 
538 aa  296  6e-79  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.33 
 
 
522 aa  296  7e-79  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  35.64 
 
 
511 aa  295  1e-78  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.33 
 
 
522 aa  295  1e-78  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.33 
 
 
522 aa  295  2e-78  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  36.24 
 
 
522 aa  293  4e-78  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  34.19 
 
 
523 aa  293  6e-78  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  35.1 
 
 
522 aa  289  8e-77  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  35.1 
 
 
522 aa  288  2e-76  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_009092  Shew_2577  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.79 
 
 
524 aa  288  2e-76  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3073  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.77 
 
 
522 aa  287  4e-76  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000166485 
 
 
-
 
NC_003910  CPS_1621  methyl-accepting chemotaxis protein  37.06 
 
 
513 aa  285  1.0000000000000001e-75  Colwellia psychrerythraea 34H  Bacteria  normal  0.113175  n/a   
 
 
-
 
NC_009997  Sbal195_1317  methyl-accepting chemotaxis sensory transducer  34.96 
 
 
522 aa  285  1.0000000000000001e-75  Shewanella baltica OS195  Bacteria  normal  normal  0.0176898 
 
 
-
 
NC_009654  Mmwyl1_3460  methyl-accepting chemotaxis sensory transducer  33.53 
 
 
520 aa  283  6.000000000000001e-75  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2648  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.66 
 
 
520 aa  283  7.000000000000001e-75  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0618  methyl-accepting chemotaxis protein  34.89 
 
 
583 aa  283  8.000000000000001e-75  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2390  methyl-accepting chemotaxis protein  33.9 
 
 
580 aa  281  1e-74  Burkholderia mallei NCTC 10229  Bacteria  normal  0.790589  n/a   
 
 
-
 
NC_006348  BMA0264  methyl-accepting chemotaxis protein  33.9 
 
 
580 aa  281  1e-74  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2473  methyl-accepting chemotaxis protein  33.9 
 
 
580 aa  281  1e-74  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2685  methyl-accepting chemotaxis protein  33.9 
 
 
580 aa  281  1e-74  Burkholderia mallei SAVP1  Bacteria  normal  0.394636  n/a   
 
 
-
 
NC_009076  BURPS1106A_0760  aerotaxis sensor receptor  33.71 
 
 
583 aa  281  3e-74  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.33 
 
 
527 aa  280  5e-74  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0927  methyl-accepting chemotaxis protein  33.71 
 
 
623 aa  280  6e-74  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0749  aerotaxis sensor receptor  33.71 
 
 
669 aa  279  8e-74  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0120  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.28 
 
 
519 aa  275  1.0000000000000001e-72  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3295  methyl-accepting chemotaxis sensory transducer  35.24 
 
 
519 aa  273  6e-72  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5286  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.4 
 
 
519 aa  271  2e-71  Delftia acidovorans SPH-1  Bacteria  normal  0.982796  normal 
 
 
-
 
NC_007974  Rmet_3682  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.1 
 
 
552 aa  263  4.999999999999999e-69  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0302709 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.57 
 
 
551 aa  263  8e-69  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_008228  Patl_2247  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.12 
 
 
511 aa  261  2e-68  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  32.71 
 
 
520 aa  261  3e-68  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007951  Bxe_A2405  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  33.65 
 
 
514 aa  260  4e-68  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000957151  normal  0.313744 
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  33.12 
 
 
522 aa  258  2e-67  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2113  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.9 
 
 
550 aa  257  3e-67  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.12 
 
 
522 aa  256  5e-67  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_008543  Bcen2424_5364  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.4 
 
 
514 aa  256  8e-67  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  32.91 
 
 
533 aa  256  8e-67  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  32.35 
 
 
522 aa  255  1.0000000000000001e-66  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1294  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.64 
 
 
575 aa  255  1.0000000000000001e-66  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00873235 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  32.89 
 
 
557 aa  253  4.0000000000000004e-66  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_010524  Lcho_1520  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.38 
 
 
543 aa  253  6e-66  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.112151 
 
 
-
 
NC_008061  Bcen_3002  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.63 
 
 
514 aa  253  7e-66  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.05 
 
 
598 aa  252  1e-65  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  31.82 
 
 
522 aa  252  1e-65  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4714  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.43 
 
 
535 aa  252  1e-65  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp1224  aerotaxis sensor receptor transmembrane protein  30.95 
 
 
514 aa  251  2e-65  Ralstonia solanacearum GMI1000  Bacteria  normal  0.229455  normal  0.54431 
 
 
-
 
NC_010506  Swoo_3519  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.68 
 
 
514 aa  251  2e-65  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.89 
 
 
556 aa  251  3e-65  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II2125  methyl-accepting chemotaxis protein  32.56 
 
 
514 aa  251  3e-65  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_5243  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.38 
 
 
514 aa  248  1e-64  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0641076  normal 
 
 
-
 
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