| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2397 |
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| Symbol | |
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| ID | 4604646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2880177 |
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| End bp | 2881769 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781794 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_928271 |
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| Protein GI | 119775531 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.448764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCACC TGAATTCTGC CTCAATGGCA GCGCCTGTTT TCACAGCACG ACTTACTTGC
CCACTCAAAT GGAGAGTCTC AACAAAAATG AATAACCTAA GCTCTGAGAT GATGCGGGAT
CATTACATTA AATCAGACAC TATCATGTTT TCGGTGCTGG TAATGATGTT CCTCTACGCC
CTCGGTTTGG CGGGGGTTTT CGGTAACTGG ACGGTGGCCA TCATAGTCGG CTTACTGACC
ACAATAGCGG CGGGCGCAAT CCGGGCCCTG AGCCCGGGAG AGCGTATTAC CCGGGTGACC
ATGGGGCTGG CATTTATGGT GATGGTCACC CTGCATGTGC ACCTGTCCCG CGGCATGATA
GAGATGCATT TTGGGTATTT TGCCTGTCTC GCGATGCTGC TCTACTGCCG GGACTGGCTG
CCCATCCTCG CTTCTGCGTT GCTTGCGGCG GTACTGCACG TGGGACTCTT CTGGTGGCAA
ACCACAGGTG GCAGTGTCTT TATGCTCGAC AGTGCAGAAC GCTCCTGGGG GATCATCTTC
ATCCACGCCG GTTATGTGGT CGTTGAAACA CTGGTGTTGG TGGTTATGGC CAAAAATTTG
CACCGTCAGG CAGAGGTTTC TTTTGACATC CAGGCGGTTG CGCATCATCT CACCGGTGAG
CAAATCGACC TCACCCACAG AACCAACGCC AGCAATAACC CCCAAAGCCT TGCATTCAAC
GGTTTTCTGG ATCATCTACA GGGCATGGTC GGCAGAATGG CATCTACGGG AGATAAGCTG
ACTCAGCTCA GTAACAGGTT GCACGATTCC ATGTCTGGGG TGAATAACCG CATGAAACTG
CAGCACAACC AAATCGATGT CATCGCCCAC GCTGTGGGCA ATGTCAGCGA TGCAGTGAGA
CTGATTTCAG ACAACGCCAA CGATGCTTCG GCAGCCGTCA GCGATGCAGA CGCAAAATCC
CGGGATGGCT CTGCGTTAAG CCGCAAAACC CTTGATGAAG TCCTTACGCT GGCAAATGCC
ATTGAACGCG CCGCCGACGC CAGCGGTCGC CTGGCCGAAG ACAGCAAAAG CATTGGCAAA
GTGCTGGATG TGATAAAAAG TATTGCGGAA CAAACCAATC TGTTGGCGCT TAACGCCGCC
ATCGAGGCCG CCCGGGCCGG AGAGCAGGGA CGTGGCTTTG CGGTAGTGGC CGACGAAGTG
CGAAGCCTCG CATCCAAAAC ACAGCAGTCA ACCGAAGAAA TTCACAACAT GATCCAACGT
CTGCAAGCCC GCAGCGATGA TGCCGTTAAC GCCATGTCAA CCAGTCAAAC GAGCGTGACC
CAGTGCGTTG CCTTTACCCA ACAAACCGAT GAAAGACTTG GCCAGGTACG TCAATCCCTG
CAGCAGATTG TAGAAATCAG CAGTCAAATC GCGAGCTCAA CTACAGAACA AATGCAAGCA
ATCGGGGAAA TAAGTCAGAA CGCATTGAGC ATCAGGCAGC TCAGTGATGA CAACAATCAT
GAGCTTGATA GGGTTGTGGA TGAAGTTGCA GAAGCAACCG GGCTCGCGGG CCTTATTCAC
TCCGATATGA AGCGTTTTCA TACCGGCTTA TAA
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| Protein sequence | MAHLNSASMA APVFTARLTC PLKWRVSTKM NNLSSEMMRD HYIKSDTIMF SVLVMMFLYA
LGLAGVFGNW TVAIIVGLLT TIAAGAIRAL SPGERITRVT MGLAFMVMVT LHVHLSRGMI
EMHFGYFACL AMLLYCRDWL PILASALLAA VLHVGLFWWQ TTGGSVFMLD SAERSWGIIF
IHAGYVVVET LVLVVMAKNL HRQAEVSFDI QAVAHHLTGE QIDLTHRTNA SNNPQSLAFN
GFLDHLQGMV GRMASTGDKL TQLSNRLHDS MSGVNNRMKL QHNQIDVIAH AVGNVSDAVR
LISDNANDAS AAVSDADAKS RDGSALSRKT LDEVLTLANA IERAADASGR LAEDSKSIGK
VLDVIKSIAE QTNLLALNAA IEAARAGEQG RGFAVVADEV RSLASKTQQS TEEIHNMIQR
LQARSDDAVN AMSTSQTSVT QCVAFTQQTD ERLGQVRQSL QQIVEISSQI ASSTTEQMQA
IGEISQNALS IRQLSDDNNH ELDRVVDEVA EATGLAGLIH SDMKRFHTGL
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