| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0143 |
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| Symbol | |
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| ID | 4172170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 169158 |
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| End bp | 170777 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053142 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_659729 |
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| Protein GI | 109896474 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTCT TAACGAAAAT GTCGATAGCG CAAAAGTTGT ACTTGATTCC GATCATTGGC
TCCATTGGCT TTTTAGTCTA CTTGTGGGTC ACAACTCACA CTGCAATGAA CAACATTGAA
CTGCTCGAAG ACGCAGACAA GGTGCAGTAT CCTGCATTAG AAGCGACCAG TAGTGCCTTG
GTCAAAATGG AAAAGGTCAA AGAAACCCTT AGTAGCGCTG TTACCACTGG CGATGAAGAG
ACGCTGGCTG TTGCTAAAGT GCAGGCGGCG GATACTAAGG TTTTGTTAGA TAAGATTATT
TCTATCGAGC CTAGCTTGAG CGTGGAGGCG AATCGTATTA AGCAGTCTTT TAATAACTAT
TTTAATCTTG CTTACAAAGT GTCTGAGTCA ATGGTGAACA ATACGGCTGA TTTCTCAAAG
ATCGGCGAGT TATCCACCAG AATGAACAAA AGCTATGATG ATGCCACTAC AGCATTAGGT
GCTTTTCGTG ATGCACGCGT AAATGGCTTC AAGCAAGCGA TAACGGAATC TAACGACGCG
TTAAAAAATA TGCTGTCATT TGGTGCCATT ATGGCTGGGG TGACGATTGT GTTGTTGTTT
GCCACAGCCA TTCCTATCGT CATGGGGATC CGCGGCAGTA TTGACCAAGT TGTTAACTCA
TTAAAAGACA TAGCCCAGGA AGATGGGGAT CTTACGGTGC GTATCCAAAG CCGGAATCAA
GACGAAATTG GTGATTTGGT GCATTGGTTT AACCAGTTTA TGGAAAAGCT ACAAGGTGTG
GTCAAAGACA TAGTGAATGC ATCCATGCCT TTATCTCAGT TGGCCCAAAA CTTAAATCAA
CTTACCGATG ATACTAACCG CACAATCGAT GTTCAGCAAA GTGCCGCTAG TCAAGCTAAG
TCAGCGGTTG ATGATATGAC GCGCAGTGTA AACGCGGTTG CTGAAAGTGC CGCTGAAGCG
GCTAATGCAG CAGGTGATGC ATCCGCTGCA GCAGATGATG GCCAAGCAGT GGTTAATCAT
ACGGTACAAA GTATTCGTGA GCTGGCAGCC AACGTGGATA GTTCTGCTGA GGTTATCAAG
CAACTTGAAG CAGATTCAAA ACAAGTCGGC GTAGTGCTGG ACGTGATTAA AGGTATTGCT
GAGCAAACCA ACTTGTTAGC GCTAAACGCC GCTATTGAAG CCGCACGAGC GGGTGAGCAT
GGTAGAGGGT TTGCGGTCGT GGCGGATGAA GTTCGCACGC TAGCGTCGCG TACTCAACAA
TCTACCGAGC AAATTCAACA AACGATTGAA CAACTGCAAA ATGCATCGCG CTCAGCGGTG
AGTGTTATGG CAAAAGGGAC AGAGCAAGCA ACGAGCAGTG TAGATACAGC AAATAAAGCC
GGCGCCAGTT TGACCGTTAT TACCCAAACC ATCAGCCGGA TAACCCAGAT GAACGACCAA
ATTGCTCACG CGACAGGCGA GCAGCAAAGT GTGGCAGGTG TAATAAGCCA CAACGTAGAT
GAGATACACC AGCGTACAGA AGAAACAGCT AATAGCTCAG GTCGCTTAGC CTCAGTGAGC
GGCGAGCTTG CAGAGTTAGC TAAGCACTTA GAAGGAATTA CGCAGCAGTT TAAGGTCTAG
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| Protein sequence | MSFLTKMSIA QKLYLIPIIG SIGFLVYLWV TTHTAMNNIE LLEDADKVQY PALEATSSAL
VKMEKVKETL SSAVTTGDEE TLAVAKVQAA DTKVLLDKII SIEPSLSVEA NRIKQSFNNY
FNLAYKVSES MVNNTADFSK IGELSTRMNK SYDDATTALG AFRDARVNGF KQAITESNDA
LKNMLSFGAI MAGVTIVLLF ATAIPIVMGI RGSIDQVVNS LKDIAQEDGD LTVRIQSRNQ
DEIGDLVHWF NQFMEKLQGV VKDIVNASMP LSQLAQNLNQ LTDDTNRTID VQQSAASQAK
SAVDDMTRSV NAVAESAAEA ANAAGDASAA ADDGQAVVNH TVQSIRELAA NVDSSAEVIK
QLEADSKQVG VVLDVIKGIA EQTNLLALNA AIEAARAGEH GRGFAVVADE VRTLASRTQQ
STEQIQQTIE QLQNASRSAV SVMAKGTEQA TSSVDTANKA GASLTVITQT ISRITQMNDQ
IAHATGEQQS VAGVISHNVD EIHQRTEETA NSSGRLASVS GELAELAKHL EGITQQFKV
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