Gene Aave_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0168 
Symbol 
ID4666460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp186648 
End bp188114 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content72% 
IMG OID639821379 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_968554 
Protein GI120608876 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00133638 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCAAAG CGAAACGAGG CCGCGACCTC TCCCCCAGCG CGCAACAGGC CCTGCAGACC 
ATAGCCTGCC GGGCGGATGC CCTTCTGCTG GCCATCTGTG CCCTCGGCGC GATCGTCGCG
CTATGGATCG GTTTCGTATA TGGCCGGCCC GGTACCGCAG CGATCTGGGG TGGTGCCCTG
ATGGCGCTGG CCGCATGGGC CTACCTGGCG GTGCGCGGCA GCCTGCTGGG CCGGCTGGCG
CTCGTGACCG CCGGCATCGG GCTGGTGGCC CTGCACATCC AGCTCAGCCT GGGCGCCACC
GAGATGCATT TCGGCGTCTT CGTCTTCCTG GCCTTCGTGC TGGCCTACCG CGACTGGCGG
CCCGTCGTCT TCGCGGCAGT GCTGATCGCC GTGCACCACA TCGCGTTCGA TCGCCTGCAG
CTGGCCGGGG GCCCGGTGTA CTGCCTTACC GAACCCGACT TCGGGCGCGT CCTGGTACAC
GCCGCGTTCG TGGTCGTGCA GACCGCGGTG GAGGTGGCCA TCACCCTGCG CACCCGCGCC
GATGCGATCG AATCGGCGGA ACTCCAGTAC CTGTGCCGCC CCCAGCAGGA CGGCCAGCTG
TCGCTGGACG TGCGCGGCGT GCCGGTGGAC AGCGCCGCGG CCCGGGCCCT GCAGGCCGCG
CTGCTGCGGC TCAACGGGGT GGTGACCGAT GTCCACCAGG CCGCGGCGGG CCTGGCGGCG
GCGGCGGGCG AGATCGCCAC GGGCAACCGC GACCTCAGCC AGCGCACCGA ACGCACCGCC
TCCCACCTGC AGGACGCAGC GGCATCGATG GGCCAGCTGG ACGGCGCCGT GCAGCACAGC
GTGCAGGAGG CGGTGGCCGC CCGCCGGCTG ACGCAGGAAG CCACCCAGGT GGCGGAGCAC
TGCGGCGGCG TGGTGACCGA GGTCGTCGCC ACCGTGCAGG ACATCCACTC CAGCGCCGGA
CGCATTGCCG ACATCGTGGG CGTGATCGAT GGCATCGCCT TCCAGACGAA CATCCTGGCG
CTGAACGCCG CGGTGGAGGC GGCCCGCGCC GGCGAACAGG GCCGGGGTTT CGCGGTGGTG
GCGAGCGAGG TGCGCTCGCT GGCCGGACGC AGCGCCGAAG CCGCCCGCGA AGTCCGCGCG
CTCATCGCCG CCTCCGTGCA GAAGGCCGAG CGCGGCAGCC GGCTGGCGAC GGATGCCGGC
GAGCACATGC AGAACGTGGT GGACTGCGCA CGCCGTGCCT CCGAGGTGGT GGGCGCCATC
AGCACATCGG TCGAAGGGCA ATCGGGCGAA CTGGGCCGCG TCAACGCCTC GGTGACCGAA
CTCGATCACA TGACCCAGCA GAACGCGGCG CTGGTCGAGC AGTCCTCGGC CGCGGCGGCC
AGCCTGCTGG AGCAGGCCGG CCGGCTCAGG AGCGTGGTGG ACGGCTTCCA GTTCCAGCCC
GAACGCCTGC TCGCCGCAGC GCGCTGA
 
Protein sequence
MGKAKRGRDL SPSAQQALQT IACRADALLL AICALGAIVA LWIGFVYGRP GTAAIWGGAL 
MALAAWAYLA VRGSLLGRLA LVTAGIGLVA LHIQLSLGAT EMHFGVFVFL AFVLAYRDWR
PVVFAAVLIA VHHIAFDRLQ LAGGPVYCLT EPDFGRVLVH AAFVVVQTAV EVAITLRTRA
DAIESAELQY LCRPQQDGQL SLDVRGVPVD SAAARALQAA LLRLNGVVTD VHQAAAGLAA
AAGEIATGNR DLSQRTERTA SHLQDAAASM GQLDGAVQHS VQEAVAARRL TQEATQVAEH
CGGVVTEVVA TVQDIHSSAG RIADIVGVID GIAFQTNILA LNAAVEAARA GEQGRGFAVV
ASEVRSLAGR SAEAAREVRA LIAASVQKAE RGSRLATDAG EHMQNVVDCA RRASEVVGAI
STSVEGQSGE LGRVNASVTE LDHMTQQNAA LVEQSSAAAA SLLEQAGRLR SVVDGFQFQP
ERLLAAAR