More than 300 homologs were found in PanDaTox collection
for query gene Patl_4183 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_4183  methyl-accepting chemotaxis sensory transducer  100 
 
 
481 aa  981    Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_4181  methyl-accepting chemotaxis sensory transducer  57.62 
 
 
498 aa  532  1e-150  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.07397  n/a   
 
 
-
 
NC_011138  MADE_00189  putative methyl-accepting chemotaxis protein  34.23 
 
 
493 aa  266  5.999999999999999e-70  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0263  methyl-accepting chemotaxis protein  33.26 
 
 
498 aa  234  3e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0143  chemotaxis sensory transducer  34.88 
 
 
506 aa  200  5e-50  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2397  putative methyl-accepting chemotaxis sensory transducer  32.27 
 
 
530 aa  192  2e-47  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.448764 
 
 
-
 
NC_008322  Shewmr7_3698  methyl-accepting chemotaxis sensory transducer  31.06 
 
 
463 aa  167  4e-40  Shewanella sp. MR-7  Bacteria  normal  0.246306  normal  0.556215 
 
 
-
 
NC_008321  Shewmr4_0326  methyl-accepting chemotaxis sensory transducer  29.93 
 
 
463 aa  167  5e-40  Shewanella sp. MR-4  Bacteria  normal  0.876228  normal 
 
 
-
 
NC_013501  Rmar_2782  methyl-accepting chemotaxis sensory transducer  26.21 
 
 
601 aa  157  4e-37  Rhodothermus marinus DSM 4252  Bacteria  normal  0.163256  n/a   
 
 
-
 
NC_008345  Sfri_0336  methyl-accepting chemotaxis sensory transducer  31.46 
 
 
500 aa  155  2e-36  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B3725  chemotaxis sensory transducer  30.54 
 
 
490 aa  151  2e-35  Ralstonia eutropha JMP134  Bacteria  normal  0.473606  n/a   
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  31.4 
 
 
648 aa  150  4e-35  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_009654  Mmwyl1_0685  methyl-accepting chemotaxis sensory transducer  33.13 
 
 
620 aa  148  2.0000000000000003e-34  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0956  methyl-accepting chemotaxis sensory transducer  31.76 
 
 
676 aa  144  4e-33  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0168  methyl-accepting chemotaxis sensory transducer  29.72 
 
 
488 aa  140  4.999999999999999e-32  Acidovorax citrulli AAC00-1  Bacteria  normal  hitchhiker  0.00133638 
 
 
-
 
NC_008228  Patl_0604  methyl-accepting chemotaxis sensory transducer  32.98 
 
 
641 aa  139  1e-31  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.471742  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  35.36 
 
 
541 aa  139  1e-31  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008740  Maqu_3809  methyl-accepting chemotaxis sensory transducer  34.48 
 
 
547 aa  139  2e-31  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1582  methyl-accepting chemotaxis sensory transducer  31.63 
 
 
678 aa  139  2e-31  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.85269 
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  36.96 
 
 
631 aa  135  9.999999999999999e-31  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  29.62 
 
 
549 aa  135  1.9999999999999998e-30  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  32.86 
 
 
646 aa  135  1.9999999999999998e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_009654  Mmwyl1_2719  methyl-accepting chemotaxis sensory transducer  33.12 
 
 
655 aa  133  9e-30  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  32.96 
 
 
572 aa  132  1.0000000000000001e-29  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0209  methyl-accepting chemotaxis sensory transducer  32.92 
 
 
677 aa  132  1.0000000000000001e-29  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  38.32 
 
 
545 aa  132  2.0000000000000002e-29  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  35.98 
 
 
553 aa  132  2.0000000000000002e-29  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_4580  methyl-accepting chemotaxis sensory transducer  32.31 
 
 
648 aa  132  2.0000000000000002e-29  Pseudomonas putida W619  Bacteria  normal  normal  0.0108713 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  30.1 
 
 
558 aa  131  3e-29  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0877  methyl-accepting chemotaxis sensory transducer  31.01 
 
 
540 aa  131  3e-29  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11332 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  32.19 
 
 
630 aa  130  4.0000000000000003e-29  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0606  methyl-accepting chemotaxis protein  33.9 
 
 
587 aa  130  4.0000000000000003e-29  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0922  methyl-accepting chemotaxis sensory transducer  32.45 
 
 
674 aa  130  4.0000000000000003e-29  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_002906  methyl-accepting chemotaxis protein  33.68 
 
 
678 aa  130  5.0000000000000004e-29  Vibrio sp. Ex25  Bacteria  normal  0.816112  n/a   
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  32.16 
 
 
646 aa  130  5.0000000000000004e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  32.19 
 
 
630 aa  130  5.0000000000000004e-29  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_008321  Shewmr4_1767  methyl-accepting chemotaxis sensory transducer  29.45 
 
 
545 aa  130  5.0000000000000004e-29  Shewanella sp. MR-4  Bacteria  normal  0.381763  normal 
 
 
-
 
NC_008322  Shewmr7_1845  methyl-accepting chemotaxis sensory transducer  29.45 
 
 
545 aa  130  5.0000000000000004e-29  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
564 aa  130  5.0000000000000004e-29  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  32.19 
 
 
630 aa  130  6e-29  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0750  methyl-accepting chemotaxis protein, putative  30.15 
 
 
539 aa  130  6e-29  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.19 
 
 
630 aa  130  6e-29  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3099  methyl-accepting chemotaxis sensory transducer  32.77 
 
 
672 aa  130  6e-29  Marinobacter aquaeolei VT8  Bacteria  normal  0.500846  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  36.48 
 
 
773 aa  129  9.000000000000001e-29  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  31.92 
 
 
541 aa  129  9.000000000000001e-29  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2116  methyl-accepting chemotaxis sensory transducer  31.02 
 
 
545 aa  129  9.000000000000001e-29  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2254  methyl-accepting chemotaxis sensory transducer  29.22 
 
 
545 aa  129  1.0000000000000001e-28  Shewanella sp. ANA-3  Bacteria  normal  normal  0.492 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  29.17 
 
 
544 aa  129  1.0000000000000001e-28  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  32.65 
 
 
630 aa  129  1.0000000000000001e-28  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  32.65 
 
 
630 aa  129  1.0000000000000001e-28  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  36.33 
 
 
553 aa  129  1.0000000000000001e-28  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_008345  Sfri_2331  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
538 aa  129  1.0000000000000001e-28  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.797541  n/a   
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  31.5 
 
 
411 aa  128  2.0000000000000002e-28  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3709  methyl-accepting chemotaxis sensory transducer  32.93 
 
 
707 aa  128  2.0000000000000002e-28  Marinomonas sp. MWYL1  Bacteria  normal  0.852924  normal  0.967698 
 
 
-
 
NC_002947  PP_0584  methyl-accepting chemotaxis transducer  33.22 
 
 
647 aa  128  2.0000000000000002e-28  Pseudomonas putida KT2440  Bacteria  normal  0.77697  normal  0.644217 
 
 
-
 
NC_010322  PputGB1_0629  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.5 
 
 
647 aa  128  2.0000000000000002e-28  Pseudomonas putida GB-1  Bacteria  normal  0.624074  hitchhiker  0.000681907 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  32.65 
 
 
628 aa  128  2.0000000000000002e-28  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4022  chemotaxis sensory transducer  34.67 
 
 
493 aa  128  2.0000000000000002e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  31.97 
 
 
550 aa  129  2.0000000000000002e-28  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  34.55 
 
 
636 aa  129  2.0000000000000002e-28  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009512  Pput_0623  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
647 aa  129  2.0000000000000002e-28  Pseudomonas putida F1  Bacteria  normal  0.494937  normal 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  31.16 
 
 
627 aa  129  2.0000000000000002e-28  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  31.51 
 
 
630 aa  128  3e-28  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_2240  methyl-accepting chemotaxis protein  28.75 
 
 
545 aa  128  3e-28  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  32.61 
 
 
679 aa  128  3e-28  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  32.31 
 
 
630 aa  127  3e-28  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  29 
 
 
671 aa  127  4.0000000000000003e-28  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_009665  Shew185_2990  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
667 aa  127  4.0000000000000003e-28  Shewanella baltica OS185  Bacteria  normal  0.413203  n/a   
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  31.43 
 
 
639 aa  127  5e-28  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  34.45 
 
 
568 aa  127  6e-28  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  30.53 
 
 
645 aa  127  6e-28  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_011138  MADE_01731  Methyl-accepting chemotaxis protein  35.17 
 
 
539 aa  127  6e-28  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2463  methyl-accepting chemotaxis sensory transducer  29.05 
 
 
545 aa  127  6e-28  Shewanella baltica OS195  Bacteria  normal  0.0650014  normal  0.35347 
 
 
-
 
NC_009665  Shew185_2347  methyl-accepting chemotaxis sensory transducer  29.05 
 
 
545 aa  127  6e-28  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0117  methyl-accepting chemotaxis protein  29.7 
 
 
658 aa  126  9e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0071  histidine kinase, HAMP region: chemotaxis sensory transducer  29.45 
 
 
658 aa  126  9e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  30.42 
 
 
546 aa  125  1e-27  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  31.82 
 
 
627 aa  125  1e-27  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_009439  Pmen_2444  methyl-accepting chemotaxis sensory transducer  32.17 
 
 
489 aa  126  1e-27  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00221824  normal 
 
 
-
 
NC_008345  Sfri_1352  methyl-accepting chemotaxis sensory transducer  38.89 
 
 
668 aa  125  1e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.49 
 
 
623 aa  125  1e-27  Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  33.23 
 
 
695 aa  125  1e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
NC_009456  VC0395_0331  methyl-accepting chemotaxis protein  34.89 
 
 
578 aa  125  1e-27  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  30.53 
 
 
645 aa  125  2e-27  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009438  Sputcn32_2637  methyl-accepting chemotaxis sensory transducer  39.52 
 
 
667 aa  125  2e-27  Shewanella putrefaciens CN-32  Bacteria  normal  0.0295827  n/a   
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  27.86 
 
 
626 aa  125  2e-27  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3134  methyl-accepting chemotaxis sensory transducer  37.73 
 
 
667 aa  125  2e-27  Shewanella baltica OS195  Bacteria  normal  0.0135223  normal  0.80442 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  29.66 
 
 
568 aa  125  2e-27  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  29.49 
 
 
633 aa  125  2e-27  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_009052  Sbal_2976  methyl-accepting chemotaxis sensory transducer  36.82 
 
 
667 aa  125  2e-27  Shewanella baltica OS155  Bacteria  hitchhiker  0.000241408  n/a   
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  30.53 
 
 
645 aa  125  2e-27  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_008700  Sama_0767  putative methyl-accepting chemotaxis sensory transducer  34.33 
 
 
546 aa  124  3e-27  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_1387  methyl-accepting chemotaxis sensory transducer  36.82 
 
 
667 aa  124  3e-27  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1752  methyl-accepting chemotaxis sensory transducer  33.79 
 
 
492 aa  124  3e-27  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.000000224536 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  34.75 
 
 
642 aa  124  3e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  28.81 
 
 
545 aa  124  3e-27  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1624  methyl-accepting chemotaxis sensory transducer  33.94 
 
 
626 aa  124  3e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  0.835429  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  37.1 
 
 
541 aa  124  3e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.95 
 
 
627 aa  124  3e-27  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  31.09 
 
 
637 aa  124  3e-27  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
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