| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4183 |
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| Symbol | |
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| ID | 4175972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5038143 |
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| End bp | 5039588 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638057219 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_663736 |
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| Protein GI | 109900481 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCTTTG TTGCTTTGCT TATCATTAGT TTAGCCATTG CAGGGATAAA CCAAACCTGG
TGGGAAGCCA TACTTGTCGG TGTATCTACT ACGTTTATAG GGATTACTGC CATTCGCCTT
AAACCACAAT CTCGCTTAAC ACAGCATATT GTTGCGGCGG GTTTGATGCT CTACAGCGCG
TTGCAGATCC ACCAAATGCA TGGCCTAGTT GAAATGCATT TTGGTGTGTT CGTGTTGCTA
TCCTTTTTAG CCTACTACCG AAACTGGCAC GTGTATATTA CTGCGATAGC AGTCGTGGCT
TTACATCATG TGTCATTCTT TTTTCTACAA AAGAATGGTT TGCCCGTATA CATATTGCTT
GAGGGTGGCT TAGCATTTTG GTTAATCGCT GTTCATGCGC TTTATGCCAT CTTGCAAGCT
ACAATGCTTG GCAAGATGGC CAACGATAAT CGTAAAGAAT CTTTTGGGAC GGCGTCTTTG
GTTTCCAGTG TTGAAGCTAT CATGCAAGAC AAACAAGCGA TTGATTTAAC CAAAAGAGCA
GATGAGAAAA TGGGTGCGAG CTCAGTTTCT GCTTTTAACA ATTTATTGAA CCTATTTAAT
AAGTTGATTA ATGATGTGCG TTCAGCGGCG CACCAAATCG ACCATAACTC TACCTCTAAT
AGCCAATACA ATGCTTCGCT GCGCCAAGCG AAAGAGCAAA GTATTCAAGA GGTGGAACAC
ATAGAATTGT CGTCACAGAA CATGATGCAA TCAACGAATG CCATGAATGG TAATAATGAG
CAGGTCAAGG CCGCATCGGA CAGAGCTAAA GCAAACACAG ATGAAGCTCA ACAAACCATG
GCGATAACGC ATAGAGACGT TACACAGTTA GGAACAAAGC TACAGCAGAC CAGTGAAACT
ATTCAAAGAT TAGCGGCAGA TTGCCAAGAC ATTTCCAAGG TTCTTGAAAC CATTCAATCT
ATTGCAGATC AAACTAACTT GCTTGCTTTG AATGCTGCGA TTGAAGCAGC AAGAGCTGGC
GAGCACGGTC GAGGTTTCGC GGTTGTAGCT GATGAAGTGC GCACTTTGGC TTCTCGCACG
AAATCGAGCA CAGAAGAGAT CAACGAGATC ATCGTTAATC TGGTAAGCTC ATCAAGAGAT
TCGAGTTCAT CAATGACAAA TTGCGTAGAG CTTAGTCAGG TCACCACTGC GCATACGGGT
TCTGTCAGCG AGCTCATGAG TGAAATTCAG CATAATATCC AAGATGTATC TGATTCGGTT
GCAAAGATGA GCGAGTCTTG TGAGCAACAA GCGTGCAACA GTGATGTGAT CCAACATGCC
GCACTTACTC TTAAAGAGAG TAATAGGAAA GAATTGGAGA CGATTTCATC GATGAATAAA
GATGCTCAAG TCCTAAATGA CATGAGTGAA GCATTAAATC GTCAAATGTC GGCTTTTCGT
TCTTAA
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| Protein sequence | MTFVALLIIS LAIAGINQTW WEAILVGVST TFIGITAIRL KPQSRLTQHI VAAGLMLYSA
LQIHQMHGLV EMHFGVFVLL SFLAYYRNWH VYITAIAVVA LHHVSFFFLQ KNGLPVYILL
EGGLAFWLIA VHALYAILQA TMLGKMANDN RKESFGTASL VSSVEAIMQD KQAIDLTKRA
DEKMGASSVS AFNNLLNLFN KLINDVRSAA HQIDHNSTSN SQYNASLRQA KEQSIQEVEH
IELSSQNMMQ STNAMNGNNE QVKAASDRAK ANTDEAQQTM AITHRDVTQL GTKLQQTSET
IQRLAADCQD ISKVLETIQS IADQTNLLAL NAAIEAARAG EHGRGFAVVA DEVRTLASRT
KSSTEEINEI IVNLVSSSRD SSSSMTNCVE LSQVTTAHTG SVSELMSEIQ HNIQDVSDSV
AKMSESCEQQ ACNSDVIQHA ALTLKESNRK ELETISSMNK DAQVLNDMSE ALNRQMSAFR
S
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