More than 300 homologs were found in PanDaTox collection
for query gene VEA_003516 on replicon NC_013456
Organism: Vibrio sp. Ex25



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013456  VEA_003516  methyl-accepting chemotaxis protein  100 
 
 
672 aa  1362    Vibrio sp. Ex25  Bacteria  normal  0.0337071  n/a   
 
 
-
 
NC_009457  VC0395_A1141  methyl-accepting chemotaxis protein  52.54 
 
 
673 aa  674    Vibrio cholerae O395  Bacteria  normal  0.0337081  n/a   
 
 
-
 
NC_009783  VIBHAR_02244  hypothetical protein  75.07 
 
 
672 aa  1022    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_004004  methyl-accepting chemotaxis protein  31.57 
 
 
663 aa  170  8e-41  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01518  hypothetical protein  30.98 
 
 
674 aa  164  4.0000000000000004e-39  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0210  methyl-accepting chemotaxis protein  29.8 
 
 
543 aa  160  9e-38  Vibrio cholerae O395  Bacteria  decreased coverage  0.000000000000824359  n/a   
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  30 
 
 
671 aa  151  5e-35  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_009457  VC0395_A1488  methyl-accepting chemotaxis protein  23.76 
 
 
672 aa  149  2.0000000000000003e-34  Vibrio cholerae O395  Bacteria  normal  0.619219  n/a   
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  29.59 
 
 
672 aa  145  2e-33  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  28.48 
 
 
620 aa  145  2e-33  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  29.26 
 
 
650 aa  144  4e-33  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  29.32 
 
 
541 aa  143  9e-33  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  28.01 
 
 
640 aa  143  9.999999999999999e-33  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.11 
 
 
533 aa  143  9.999999999999999e-33  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  30.11 
 
 
533 aa  143  9.999999999999999e-33  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  29.4 
 
 
674 aa  141  4.999999999999999e-32  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_009456  VC0395_1007  hemolysin secretion protein HylB  30.59 
 
 
548 aa  140  4.999999999999999e-32  Vibrio cholerae O395  Bacteria  normal  0.702356  n/a   
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  31.23 
 
 
638 aa  140  6e-32  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  27.71 
 
 
637 aa  139  1e-31  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008700  Sama_0767  putative methyl-accepting chemotaxis sensory transducer  32.18 
 
 
546 aa  139  2e-31  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  27.64 
 
 
546 aa  139  2e-31  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_005957  BT9727_0486  methyl-accepting chemotaxis protein  29.29 
 
 
660 aa  139  2e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  27.87 
 
 
536 aa  139  2e-31  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  27.61 
 
 
549 aa  138  3.0000000000000003e-31  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_006274  BCZK0488  methyl-accepting chemotaxis protein  28.87 
 
 
660 aa  138  3.0000000000000003e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1539  histidine kinase, HAMP region: chemotaxis sensory transducer  29.77 
 
 
626 aa  138  3.0000000000000003e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.206608  normal  0.0710897 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  29.43 
 
 
674 aa  138  4e-31  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_011725  BCB4264_A0613  methyl-accepting chemotaxis protein  29.08 
 
 
660 aa  138  4e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  30.48 
 
 
552 aa  137  5e-31  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  29.01 
 
 
552 aa  137  5e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  30.48 
 
 
552 aa  137  5e-31  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1988  methyl-accepting chemotaxis sensory transducer  27.2 
 
 
674 aa  137  6.0000000000000005e-31  Thauera sp. MZ1T  Bacteria  normal  0.588025  n/a   
 
 
-
 
NC_011832  Mpal_1772  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.71 
 
 
751 aa  137  7.000000000000001e-31  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  28.95 
 
 
640 aa  137  8e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_007520  Tcr_1999  methyl-accepting chemotaxis sensory transducer  30.72 
 
 
405 aa  137  8e-31  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  32.56 
 
 
552 aa  137  9e-31  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_011773  BCAH820_0631  methyl-accepting chemotaxis protein  28.87 
 
 
660 aa  137  9e-31  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  29.02 
 
 
540 aa  137  9.999999999999999e-31  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  29.13 
 
 
653 aa  136  9.999999999999999e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  29.03 
 
 
638 aa  136  9.999999999999999e-31  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  28.24 
 
 
533 aa  135  1.9999999999999998e-30  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  31.34 
 
 
521 aa  135  1.9999999999999998e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_007954  Sden_1963  chemotaxis sensory transducer  32.1 
 
 
535 aa  136  1.9999999999999998e-30  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_43220  putative methyl-accepting chemotaxis transducer  28.49 
 
 
652 aa  136  1.9999999999999998e-30  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.625872 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  29.27 
 
 
636 aa  135  3e-30  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_013457  VEA_001261  methyl-accepting chemotaxis protein  27.02 
 
 
547 aa  135  3e-30  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3266  methyl-accepting chemotaxis sensory transducer  29.6 
 
 
543 aa  135  3e-30  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0606  methyl-accepting chemotaxis protein  31.61 
 
 
587 aa  135  3e-30  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0544  methyl-accepting chemotaxis protein  27.85 
 
 
660 aa  134  3.9999999999999996e-30  Bacillus anthracis str. Sterne  Bacteria  normal  0.0138447  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  31 
 
 
638 aa  134  3.9999999999999996e-30  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_007530  GBAA_0575  methyl-accepting chemotaxis protein  27.85 
 
 
660 aa  134  3.9999999999999996e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  29.17 
 
 
653 aa  134  6e-30  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  27.84 
 
 
658 aa  134  6e-30  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  29.2 
 
 
621 aa  134  6.999999999999999e-30  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_003910  CPS_1937  methyl-accepting chemotaxis protein  31.46 
 
 
662 aa  133  7.999999999999999e-30  Colwellia psychrerythraea 34H  Bacteria  normal  0.0215017  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  29.36 
 
 
638 aa  134  7.999999999999999e-30  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  28.33 
 
 
638 aa  133  9e-30  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2111  aerotaxis receptor Aer-2  31.07 
 
 
521 aa  133  1.0000000000000001e-29  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  28.26 
 
 
541 aa  133  1.0000000000000001e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  31.6 
 
 
541 aa  133  1.0000000000000001e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  30.25 
 
 
572 aa  133  1.0000000000000001e-29  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0594  methyl-accepting chemotaxis protein  30.21 
 
 
658 aa  133  1.0000000000000001e-29  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4726  methyl-accepting chemotaxis protein  28.09 
 
 
660 aa  132  2.0000000000000002e-29  Bacillus cereus G9842  Bacteria  normal  0.520736  normal 
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  31.23 
 
 
533 aa  132  2.0000000000000002e-29  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  30.35 
 
 
628 aa  132  2.0000000000000002e-29  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00464  methyl-accepting chemotaxis protein  28.49 
 
 
636 aa  132  2.0000000000000002e-29  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  30.87 
 
 
549 aa  132  3e-29  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  30.07 
 
 
545 aa  132  3e-29  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  25.88 
 
 
550 aa  131  3e-29  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_009654  Mmwyl1_2432  methyl-accepting chemotaxis sensory transducer  31.37 
 
 
555 aa  131  4.0000000000000003e-29  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.0013651  normal  0.119091 
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  32.39 
 
 
620 aa  131  4.0000000000000003e-29  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  30.07 
 
 
638 aa  131  4.0000000000000003e-29  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  30.13 
 
 
639 aa  131  4.0000000000000003e-29  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.77 
 
 
521 aa  131  4.0000000000000003e-29  Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  27.83 
 
 
573 aa  131  4.0000000000000003e-29  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
521 aa  131  4.0000000000000003e-29  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  28.84 
 
 
542 aa  131  4.0000000000000003e-29  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  29.82 
 
 
636 aa  131  4.0000000000000003e-29  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  31.88 
 
 
540 aa  131  5.0000000000000004e-29  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  28.3 
 
 
674 aa  131  5.0000000000000004e-29  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  29.86 
 
 
555 aa  131  5.0000000000000004e-29  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_011138  MADE_03783  Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)  36.76 
 
 
527 aa  131  5.0000000000000004e-29  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  31.37 
 
 
629 aa  130  6e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2188  histidine kinase  29.64 
 
 
540 aa  130  6e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.035953  normal 
 
 
-
 
NC_009654  Mmwyl1_4057  methyl-accepting chemotaxis sensory transducer  29.67 
 
 
537 aa  130  7.000000000000001e-29  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  31.14 
 
 
533 aa  130  8.000000000000001e-29  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  29.08 
 
 
554 aa  130  8.000000000000001e-29  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1491  histidine kinase, HAMP region: chemotaxis sensory transducer  33.07 
 
 
539 aa  130  8.000000000000001e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05136  torS; sensor protein TorS  26.53 
 
 
558 aa  130  8.000000000000001e-29  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  29.69 
 
 
639 aa  130  8.000000000000001e-29  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  29.93 
 
 
630 aa  130  8.000000000000001e-29  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  28.69 
 
 
568 aa  130  9.000000000000001e-29  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.08 
 
 
554 aa  130  9.000000000000001e-29  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  26.92 
 
 
541 aa  130  9.000000000000001e-29  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_011146  Gbem_0383  methyl-accepting chemotaxis sensory transducer  29.75 
 
 
700 aa  129  1.0000000000000001e-28  Geobacter bemidjiensis Bem  Bacteria  normal  0.424843  n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  28.18 
 
 
630 aa  130  1.0000000000000001e-28  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_4624  methyl-accepting chemotaxis protein  37 
 
 
539 aa  130  1.0000000000000001e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.140064  n/a   
 
 
-
 
NC_010506  Swoo_1310  methyl-accepting chemotaxis sensory transducer  33.66 
 
 
497 aa  129  1.0000000000000001e-28  Shewanella woodyi ATCC 51908  Bacteria  normal  0.615607  normal 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  30 
 
 
554 aa  129  1.0000000000000001e-28  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  29.93 
 
 
630 aa  130  1.0000000000000001e-28  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
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