| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1141 |
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| Symbol | |
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| ID | 5136026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1201076 |
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| End bp | 1203097 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532599 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_001217087 |
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| Protein GI | 147674542 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0337081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTGA CAAAAAATTT ATCCTTAACC CAAACACTCG GTGCGGTGTT TCTATGCATA
ACCATACTGA TGATTAGCTT ATCTGTCACC AGTTTACGTG GCATAGAGCG GGTTGGCGCT
CAGTTTAATC AACTGTCTGA ACAAGCTTTG CCCTTTGCGC TTAATAATGC AGCGTTAACG
CAAAATTTTC TCGAACAAGT GAAGTACCTA GGTTATGGCA CTCGTAGCCA ATCTGAGCAA
GAGCTCAATC AAGTGCTCAA TGAATGGCAA AAGCTGGATG CTCAAGCGGG AGATGAAATA
ACAAGATTGC AGCAGAACGT ACAATTGCTC TCTAGCGCTG AAGCGGTTCA ACAAGCCGAG
CAGTTACAGC GAGAGATCCT TCATTTTCAA CAGCTAGCCC AATCGATTCT CAAACTTCAA
CAACTGCAAT TGAGTAAAAC AGCACAAATC AGTGAGCAAG CGAAACAATT TCGTTATGGC
TTGAGTTCAA TCGGACCTGA AATGGGCCGT ATCGCCTCGT TTTTAGCGGT GGATAACCCA
GAAGCCATGG ATGCAGCGAA CCGATTTACC GCCAGTGCCA GCGCAATGGA AAGTGCTTTT
TTATTGCTGT TTATCGAAGA AGAGATGTCA GCAGCGCAAA AATACCGCCA AGAGTTAAAA
AATCGGGTAG CGGGATTGGA ACTGGCGTTT GATGACTTCA AAGAGTGGTA CCCAGAAATT
AAAGATTACG CGAGCTTAAC TGCCCCCTAT GAAATGGTGT TAGCAGGCTT TCAAGCGCAA
GCCGTGATAG AGCAGATCAT TAATAAACTG GAAGACGCGC AACAACAAAA TAAGGATTTT
GCAAGCGCTG CAGAGGTTGC GCAGCAACTT GTCACGCAGC TCAATCAGTG GTCAACATTG
GCTCAACAAC ACATTGTGCA GGGTAAGCAA GAGGTAACAT CAACCATTTC TGCCGTCACC
CTCACACAGC AAATCAGCGG CACTCTCTTG GTGCTGGCGA TTTTGGCGGT GTGGTTTGGC
TTGCGCCGTT GGATAGGGCG AGCGCTGAAC AACATCACTC GTCATCTCGC GCAGTTAACA
CAACATAAGC TTAACCACAG ATTAGATTTA GTCGGGCCGC AAGATTTTCA AAATGTCGCA
GCGCAACTCA ATCAAGTGAT CGTATCAACG CATGAGTCGC TCGCATTAGT CACGCGCAAC
TGCGAAACGC TCTACCAAAC GGCTGAGCTG AGCCATGGTT CCGCAGAACA ATCAAACCAA
AGCTTAGCGG CGCAAAATCA AGCCTTGTTG ACCATGGCTG CAACCATTAA TCAACTGGAT
GCATCAATTC GCGAAATCGC CGGAGTGAGT CACGATTCGT ACACGGATTC TGTGGAAGCG
GCGGAACATT CCGCGCAAGG TGTGAAGGTG ATAGAGCAGA ATCAGCAGCG TTTACAAGCA
TTAGAAACCA CCTTAGCGGT TAATGATGCG GCGATGTCTG AACTCAATCA GCGCGTAACC
AGTATTCGTG AAATGGTGGA TATGATCAGT GGCATTGCCG ATAGCACCAA TTTGTTAGCG
CTGAATGCGG CGATTGAAGC CGCACGAGCC GGAGAGCAAG GGCGCGGTTT TGCCGTAGTG
GCTGACGAAG TTCGTAAATT GGCCAGTGAT ACCAGTAAAC AGACCACCAA TATTCGTGAC
ATGATGAATG AGTTGGTGAC TGCGGCCAGT AAATCACGCC AAGCGGTGGA TGAATCGCGT
AAAGAGATGG TCACCGCCCT ACAATCGAGT GAAGAAGTAA AAAGTACCTT TATGCAGATT
GAGCGTGCAG TGGCACATAT TCGCACTCGA GTCGAGCAGA TCACTCAAGC GACCGAAGAA
CAAAAGCGAG CCACGGCGGA TGTAAACAAA GCGGTAGCGC AAATTTCCGA ACAAGGGCAA
GAAACCAAAC GTCAGTTGGA TGCCATGTTG GAAAGCGCGG AACAAGTCGC AGAGATTGCT
GGTCATCAAC AAGCGATGTT GCATAAGTAT GAGTTGAACT GA
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| Protein sequence | MALTKNLSLT QTLGAVFLCI TILMISLSVT SLRGIERVGA QFNQLSEQAL PFALNNAALT
QNFLEQVKYL GYGTRSQSEQ ELNQVLNEWQ KLDAQAGDEI TRLQQNVQLL SSAEAVQQAE
QLQREILHFQ QLAQSILKLQ QLQLSKTAQI SEQAKQFRYG LSSIGPEMGR IASFLAVDNP
EAMDAANRFT ASASAMESAF LLLFIEEEMS AAQKYRQELK NRVAGLELAF DDFKEWYPEI
KDYASLTAPY EMVLAGFQAQ AVIEQIINKL EDAQQQNKDF ASAAEVAQQL VTQLNQWSTL
AQQHIVQGKQ EVTSTISAVT LTQQISGTLL VLAILAVWFG LRRWIGRALN NITRHLAQLT
QHKLNHRLDL VGPQDFQNVA AQLNQVIVST HESLALVTRN CETLYQTAEL SHGSAEQSNQ
SLAAQNQALL TMAATINQLD ASIREIAGVS HDSYTDSVEA AEHSAQGVKV IEQNQQRLQA
LETTLAVNDA AMSELNQRVT SIREMVDMIS GIADSTNLLA LNAAIEAARA GEQGRGFAVV
ADEVRKLASD TSKQTTNIRD MMNELVTAAS KSRQAVDESR KEMVTALQSS EEVKSTFMQI
ERAVAHIRTR VEQITQATEE QKRATADVNK AVAQISEQGQ ETKRQLDAML ESAEQVAEIA
GHQQAMLHKY ELN
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