Gene VIBHAR_02244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02244 
Symbol 
ID5554965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2243828 
End bp2245846 
Gene Length2019 bp 
Protein Length672 aa 
Translation table11 
GC content47% 
IMG OID640907730 
Producthypothetical protein 
Protein accessionYP_001445433 
Protein GI156974526 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACGC ACAAACGTTT ACGCTTTTCT TTTTCACTGA TTCAGACTAT CAGTGCAACA 
TTTTTAACTA TCATCGCACT TGTTATAGCC CTTTCTACCG CAAGTTTCAA AGGAATGGAG
CAGGTTGGGG AACAATTTGA AGAGTTGTCT CAAAAAGCGT TACCCATGGC AATGGCAAAT
GCGACACTCA CTCGCAATGT GCTAGAACAG GTCAAGTTAC TTAACTATGG GATGCAAATT
ACGGATCCCA CTGAACTACC TCTTACCATT TCACAAATTG AGGCGCTAGC AAAGCAGAGT
GATGGGCTAA TCGAGCAAAC ATCCACTGTG GCTGAACATC TCTCAAGTAT GCTGAGAGAA
AACGTTGCAG AGTTGCATCA AGTCACCAAT TCGATCTTAT CGAAACAGTC TGCGGTGATT
CAGATGCAAA GCGATATTAA CGCCGCAGTG GGTGGCTTTC GCTATGGCTT GAGCCCTATC
GGGCCGGAGA TGCACCGCAT TAGTTCGTTC CTGAGTGAGG ATAACCCTGA GTCTAGTGAC
GCAGCGAACC GCTTTATCGC CTCAGCAAGC TCAATGGAGA GTACTTTCTT GCTTATGATG
ACGCACACCG AGTTAGAGAA AGCCGAGCAA GAGTATAGGG AAATGCGCAA TCGAATTGCT
GGTATCAATC TCGCTTTTGA TGATTTCAAA GAGTGGCATC CGGAGGTTAA TGAGTTTACC
AGCTTGGTCG CGCCTTATGA CATGGTGCAA GCTGGCTTTA ACGATGACGG CGTCTTGCGT
TTAATACTGA CCAAGCTAGA GCAGAGCGAA CAGCAGAAAG CGGAGTTTCA ACGTGCCTCG
CAGCTCGCAA ACGAAACCAT GTATTTGCTC GACCAGGTAT CTGATGCCGC GTCTGATCTT
GTTGATGATC GTAAGTCCGT AGTTCACAGC ACAATTCAAA ACGCGAGTTT GATGTCAGTT
ATATCCGCTG GTGTTATCTC TCTAGTGGTC TTAGTGACGT GGTTTGGCCT AAGAACGTGG
ATCAACCGGG GTCTCAAGAA TATCCTTAGC CGTTTGTCGG CACTGACAGA GCACGATTTC
CGAGGTAAAG CGCAAGAGGT TGGACCGTTT GAGTTAAAAG AAGTCGCGCG CAAACTGAAC
CAAGTTATCG ACTCAACGCA TGATTCTATT TCTACCGTCA CGCGTAACTG CGAAACCTTG
TATCAAACCG CTGAGATCAG CCATGATGCG GCAGAGCAAA CAAATCAAAG CTTGACCACG
CAAAATGAAG CGTTAATGAG CATGGTGACG ACGATCACTC AGTTAGAAGC GTCGATTCGA
GAGATTGCAT CGGTCACTAA TGCTTCGTCT GAAGATTCTT ATTTAGCGAC GGAACATACA
GTGAAAGGCG TTGCTGTGGT AGAGCAAAAC CGTCAGCGTT TGGAATCACT AGAGAGCTCT
CTCAACACAA ACGAACAATC TATGATGGAA CTCGATCTGC GCGTAAAACA TATTCGTGAA
ATGGTTGACA TGATCAGTGG CATTGCTGAC AACACTAACT TACTTGCGTT GAACGCAGCG
ATTGAGGCTG CTCGGGCAGG AGACCAAGGC CGAGGATTTG CAGTCGTTGC GGATGAAGTT
CGTAAGTTAG CCAGAGATAC CTCTCAGCAG ACGACCAACA TTCGTGAAAT TATGAATGAG
TTAGTTGTTG CGGCAGAACG TTCTCGTAAA GCGGTGAGTG ATTCGCGAGA AGAAATGTCA
TGTGCGTTAC AATCAAGTCA ACAAGTGAAA TCAGCATTTA CCGATATCAA TGAAGCGGTA
CAACTGATTC AGCAGCGTGT CGAACAGATC TCTGTTGCGA CAGAAGAGCA AGAGCGAGCA
ACGGCGGATG TGTCGCAAGC CATTACACAT ATTTCTGACC AAGGTGTACA TACCAAACTC
CAATTAGAAT CCATGGTCAA AAGTTCAGAG CAAGTCGCAG ACATCGCGGG GCACCAACAA
GCGATGCTGC ATAAATACGA ACTGCATCAA GTGAGTTGA
 
Protein sequence
MTTHKRLRFS FSLIQTISAT FLTIIALVIA LSTASFKGME QVGEQFEELS QKALPMAMAN 
ATLTRNVLEQ VKLLNYGMQI TDPTELPLTI SQIEALAKQS DGLIEQTSTV AEHLSSMLRE
NVAELHQVTN SILSKQSAVI QMQSDINAAV GGFRYGLSPI GPEMHRISSF LSEDNPESSD
AANRFIASAS SMESTFLLMM THTELEKAEQ EYREMRNRIA GINLAFDDFK EWHPEVNEFT
SLVAPYDMVQ AGFNDDGVLR LILTKLEQSE QQKAEFQRAS QLANETMYLL DQVSDAASDL
VDDRKSVVHS TIQNASLMSV ISAGVISLVV LVTWFGLRTW INRGLKNILS RLSALTEHDF
RGKAQEVGPF ELKEVARKLN QVIDSTHDSI STVTRNCETL YQTAEISHDA AEQTNQSLTT
QNEALMSMVT TITQLEASIR EIASVTNASS EDSYLATEHT VKGVAVVEQN RQRLESLESS
LNTNEQSMME LDLRVKHIRE MVDMISGIAD NTNLLALNAA IEAARAGDQG RGFAVVADEV
RKLARDTSQQ TTNIREIMNE LVVAAERSRK AVSDSREEMS CALQSSQQVK SAFTDINEAV
QLIQQRVEQI SVATEEQERA TADVSQAITH ISDQGVHTKL QLESMVKSSE QVADIAGHQQ
AMLHKYELHQ VS