More than 300 homologs were found in PanDaTox collection
for query gene Mnod_7525 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011894  Mnod_7525  two component transcriptional regulator, LuxR family  100 
 
 		 210 aa  405  1.0000000000000001e-112  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.588744  n/a   
 
 
-
 
NC_010511  M446_6781  two component LuxR family transcriptional regulator  79.43 
 
 		 212 aa  316  2e-85  Methylobacterium sp. 4-46  Bacteria  normal  0.156502  normal  1 
 
 
-
 
NC_010505  Mrad2831_3393  two component LuxR family transcriptional regulator  60 
 
 		 224 aa  238  5e-62  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0944476 
 
 
-
 
NC_010172  Mext_4453  response regulator receiver  59.42 
 
 		 229 aa  237  9e-62  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.731843 
 
 
-
 
NC_011757  Mchl_4917  two component transcriptional regulator, LuxR family  59.42 
 
 		 221 aa  237  9e-62  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_4967  two component transcriptional regulator, LuxR family  59.42 
 
 		 220 aa  236  2e-61  Methylobacterium populi BJ001  Bacteria  normal  0.103677  normal  0.0219916 
 
 
-
 
NC_011894  Mnod_4951  two component transcriptional regulator, LuxR family  58.33 
 
 		 210 aa  227  1e-58  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.710213  n/a   
 
 
-
 
NC_010511  M446_4923  two component LuxR family transcriptional regulator  57.84 
 
 		 210 aa  219  1.9999999999999999e-56  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011887  Mnod_8027  two component transcriptional regulator, LuxR family  49.51 
 
 		 211 aa  203  1e-51  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.982767  n/a   
 
 
-
 
NC_011666  Msil_0485  two component transcriptional regulator, LuxR family  50 
 
 		 208 aa  200  9.999999999999999e-51  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010725  Mpop_4619  two component transcriptional regulator, LuxR family  49.5 
 
 		 226 aa  186  2e-46  Methylobacterium populi BJ001  Bacteria  normal  0.167951  normal  0.786248 
 
 
-
 
NC_010172  Mext_4137  response regulator receiver  49.5 
 
 		 225 aa  185  4e-46  Methylobacterium extorquens PA1  Bacteria  normal  0.218362  normal  1 
 
 
-
 
NC_011757  Mchl_4505  two component transcriptional regulator, LuxR family  49.5 
 
 		 225 aa  185  4e-46  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.782253  normal  1 
 
 
-
 
NC_007925  RPC_1904  two component LuxR family transcriptional regulator  44.23 
 
 		 218 aa  182  3e-45  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0420846  normal  1 
 
 
-
 
NC_009485  BBta_2236  two-component LuxR family response regulator  45.19 
 
 		 211 aa  173  1.9999999999999998e-42  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.520528  normal  0.548087 
 
 
-
 
NC_010505  Mrad2831_4197  two component LuxR family transcriptional regulator  42.44 
 
 		 230 aa  159  3e-38  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.182672  normal  0.341651 
 
 
-
 
NC_009485  BBta_5941  two component LuxR family transcriptional regulator  39.41 
 
 		 206 aa  143  2e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234506  normal  1 
 
 
-
 
NC_011894  Mnod_7040  two component transcriptional regulator, LuxR family  41.95 
 
 		 217 aa  141  8e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  40.48 
 
 		 213 aa  139  3e-32  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_010581  Bind_0304  two component LuxR family transcriptional regulator  39.6 
 
 		 229 aa  137  1e-31  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.103244 
 
 
-
 
NC_008825  Mpe_A0357  two-component response regulator  42.72 
 
 		 210 aa  135  4e-31  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00848176  normal  1 
 
 
-
 
NC_008340  Mlg_2722  two component LuxR family transcriptional regulator  39.9 
 
 		 214 aa  132  3e-30  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.378798 
 
 
-
 
NC_007947  Mfla_0816  two component LuxR family transcriptional regulator  38.42 
 
 		 212 aa  131  6.999999999999999e-30  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.0000419268  normal  1 
 
 
-
 
NC_008686  Pden_1784  two component LuxR family transcriptional regulator  37.44 
 
 		 224 aa  130  2.0000000000000002e-29  Paracoccus denitrificans PD1222  Bacteria  hitchhiker  0.000422915  normal  1 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  37.98 
 
 		 215 aa  129  4.0000000000000003e-29  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_011666  Msil_3144  two component transcriptional regulator, LuxR family  38.68 
 
 		 232 aa  125  3e-28  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011666  Msil_3829  two component transcriptional regulator, LuxR family  36.27 
 
 		 211 aa  125  5e-28  Methylocella silvestris BL2  Bacteria  n/a    normal  0.026767 
 
 
-
 
NC_008687  Pden_2990  two component LuxR family transcriptional regulator  34.48 
 
 		 223 aa  124  1e-27  Paracoccus denitrificans PD1222  Bacteria  normal  0.656569  normal  0.240376 
 
 
-
 
NC_011887  Mnod_8023  two component transcriptional regulator, LuxR family  39.51 
 
 		 217 aa  123  2e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.634105  n/a   
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  38.65 
 
 		 235 aa  121  7e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  39.05 
 
 		 222 aa  120  9.999999999999999e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  34.95 
 
 		 233 aa  120  9.999999999999999e-27  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  39.81 
 
 		 221 aa  119  3e-26  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_2640  two component LuxR family transcriptional regulator  36.27 
 
 		 205 aa  119  3.9999999999999996e-26  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.437778  normal  1 
 
 
-
 
NC_009485  BBta_6075  two-component response regulator  36.41 
 
 		 216 aa  118  6e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  38.42 
 
 		 220 aa  117  9e-26  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.55611 
 
 
-
 
NC_010524  Lcho_0242  two component LuxR family transcriptional regulator  37.86 
 
 		 211 aa  117  9.999999999999999e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000159114 
 
 
-
 
NC_003910  CPS_2033  LuxR family DNA-binding response regulator  34.76 
 
 		 208 aa  117  1.9999999999999998e-25  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_0653  two component LuxR family transcriptional regulator  42.31 
 
 		 217 aa  116  1.9999999999999998e-25  Methylobacterium sp. 4-46  Bacteria  normal  0.8237  normal  1 
 
 
-
 
NC_010725  Mpop_3828  two component transcriptional regulator, LuxR family  33.66 
 
 		 220 aa  114  6.9999999999999995e-25  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  38.57 
 
 		 216 aa  114  8.999999999999998e-25  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  38.57 
 
 		 216 aa  114  8.999999999999998e-25  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_1714  two component LuxR family transcriptional regulator  34.34 
 
 		 213 aa  114  8.999999999999998e-25  Methylobacillus flagellatus KT  Bacteria  normal  0.975164  hitchhiker  0.000785935 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  33.97 
 
 		 210 aa  114  1.0000000000000001e-24  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.612124 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  38.16 
 
 		 228 aa  114  1.0000000000000001e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_2450  two component LuxR family transcriptional regulator  32.69 
 
 		 214 aa  113  2.0000000000000002e-24  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00539256  n/a   
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  36.06 
 
 		 206 aa  113  2.0000000000000002e-24  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  30.66 
 
 		 216 aa  113  2.0000000000000002e-24  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_1290  two component LuxR family transcriptional regulator  36.84 
 
 		 209 aa  112  5e-24  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.542915  normal  1 
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  34.91 
 
 		 215 aa  111  6e-24  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  34.45 
 
 		 216 aa  110  1.0000000000000001e-23  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  37.25 
 
 		 213 aa  110  1.0000000000000001e-23  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  35.29 
 
 		 212 aa  110  1.0000000000000001e-23  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_1985  two component transcriptional regulator, LuxR family  34.15 
 
 		 222 aa  109  2.0000000000000002e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010510  Mrad2831_5893  two component LuxR family transcriptional regulator  39.9 
 
 		 219 aa  109  2.0000000000000002e-23  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.125381 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  34.58 
 
 		 214 aa  110  2.0000000000000002e-23  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_010172  Mext_1668  response regulator receiver  34.15 
 
 		 222 aa  110  2.0000000000000002e-23  Methylobacterium extorquens PA1  Bacteria  normal  0.679138  normal  1 
 
 
-
 
NC_002947  PP_2672  LuxR family DNA-binding response regulator  35.75 
 
 		 212 aa  109  3e-23  Pseudomonas putida KT2440  Bacteria  normal  0.24109  normal  1 
 
 
-
 
NC_009512  Pput_3091  two component LuxR family transcriptional regulator  35.44 
 
 		 212 aa  109  3e-23  Pseudomonas putida F1  Bacteria  normal  0.425372  normal  1 
 
 
-
 
NC_010725  Mpop_0347  two component transcriptional regulator, LuxR family  34.15 
 
 		 222 aa  109  3e-23  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  34.62 
 
 		 213 aa  109  4.0000000000000004e-23  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  28.5 
 
 		 215 aa  109  4.0000000000000004e-23  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  34.74 
 
 		 217 aa  108  4.0000000000000004e-23  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008751  Dvul_0670  two component LuxR family transcriptional regulator  33.49 
 
 		 216 aa  108  4.0000000000000004e-23  Desulfovibrio vulgaris DP4  Bacteria  normal  0.267154  normal  1 
 
 
-
 
NC_008786  Veis_3303  two component LuxR family transcriptional regulator  35.82 
 
 		 222 aa  108  5e-23  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.248413 
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  33.82 
 
 		 221 aa  108  6e-23  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_3131  two component LuxR family transcriptional regulator  34.95 
 
 		 212 aa  108  7.000000000000001e-23  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.33361 
 
 
-
 
NC_006368  lpp2699  transmission activator LetA  31.43 
 
 		 219 aa  107  9.000000000000001e-23  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_2114  LuxR response regulator receiver  34.29 
 
 		 212 aa  107  9.000000000000001e-23  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.22828 
 
 
-
 
NC_007347  Reut_A1785  two component LuxR family transcriptional regulator  34.78 
 
 		 206 aa  107  9.000000000000001e-23  Ralstonia eutropha JMP134  Bacteria  normal  0.762084  n/a   
 
 
-
 
NC_013440  Hoch_1846  two component transcriptional regulator, LuxR family  33.33 
 
 		 212 aa  107  9.000000000000001e-23  Haliangium ochraceum DSM 14365  Bacteria  normal  0.349565  normal  0.2019 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  37.02 
 
 		 218 aa  107  1e-22  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_0180  two component transcriptional regulator, LuxR family  35.92 
 
 		 213 aa  107  1e-22  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_1873  response regulator receiver protein  32.7 
 
 		 215 aa  107  1e-22  Shewanella amazonensis SB2B  Bacteria  normal  0.56104  normal  1 
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  34.91 
 
 		 212 aa  106  2e-22  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_011758  Mchl_5446  two component transcriptional regulator, LuxR family  37.75 
 
 		 218 aa  107  2e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.26634  normal  1 
 
 
-
 
NC_011312  VSAL_I2141  response regulator  29.52 
 
 		 214 aa  107  2e-22  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.126922  n/a   
 
 
-
 
NC_010644  Emin_0306  two component LuxR family transcriptional regulator  30.05 
 
 		 215 aa  106  2e-22  Elusimicrobium minutum Pei191  Bacteria  unclonable  0.000000000161342  hitchhiker  0.00000159266 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  37.5 
 
 		 219 aa  106  2e-22  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  32.39 
 
 		 214 aa  107  2e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_009436  Ent638_2501  response regulator  29.86 
 
 		 218 aa  107  2e-22  Enterobacter sp. 638  Bacteria  hitchhiker  0.000242353  normal  0.495647 
 
 
-
 
NC_008463  PA14_38900  putative two-component response regulator  39.41 
 
 		 225 aa  106  2e-22  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.899747  normal  1 
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  36.27 
 
 		 228 aa  107  2e-22  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal  1 
 
 
-
 
NC_007614  Nmul_A1336  two component LuxR family transcriptional regulator  32.52 
 
 		 208 aa  106  3e-22  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  29.5 
 
 		 208 aa  106  3e-22  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  29.25 
 
 		 216 aa  105  3e-22  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  34.42 
 
 		 226 aa  106  3e-22  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_1725  response regulator  29.38 
 
 		 218 aa  105  3e-22  Escherichia coli ATCC 8739  Bacteria  hitchhiker  0.000351159  normal  1 
 
 
-
 
CP001637  EcDH1_1732  two component transcriptional regulator, LuxR family  29.38 
 
 		 218 aa  105  4e-22  Escherichia coli DH1  Bacteria  hitchhiker  0.00000000000321601  n/a   
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  37.56 
 
 		 214 aa  105  4e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.785726 
 
 
-
 
NC_011894  Mnod_0855  two component transcriptional regulator, LuxR family  33.98 
 
 		 223 aa  105  4e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.082304  n/a   
 
 
-
 
NC_010498  EcSMS35_1269  response regulator  29.38 
 
 		 218 aa  105  4e-22  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.0000584326  hitchhiker  0.00198125 
 
 
-
 
NC_009801  EcE24377A_2147  response regulator  29.38 
 
 		 218 aa  105  4e-22  Escherichia coli E24377A  Bacteria  hitchhiker  0.0000040455  n/a   
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  29.19 
 
 		 215 aa  105  4e-22  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  33.49 
 
 		 213 aa  105  4e-22  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_008390  Bamb_3100  two component LuxR family transcriptional regulator  37.02 
 
 		 218 aa  105  4e-22  Burkholderia ambifaria AMMD  Bacteria  normal  0.650822  n/a   
 
 
-
 
NC_010551  BamMC406_2966  two component LuxR family transcriptional regulator  37.02 
 
 		 218 aa  105  4e-22  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  0.288922 
 
 
-
 
NC_010658  SbBS512_E1041  response regulator  29.38 
 
 		 218 aa  105  4e-22  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.0000000644757  n/a   
 
 
-
 
NC_011666  Msil_2271  two component transcriptional regulator, LuxR family  36.1 
 
 		 223 aa  105  4e-22  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007404  Tbd_2464  two component LuxR family transcriptional regulator  33.18 
 
 		 221 aa  105  5e-22  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
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